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Conserved domains on  [gi|106709971|gb|ABF82429|]
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halogenase [Streptomyces chartreusis]

Protein Classification

Rossmann-fold NAD(P)-binding domain-containing protein( domain architecture ID 229380)

Rossmann-fold NAD(P)-binding domain-containing protein may function as an oxidoreductase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NADB_Rossmann super family cl21454
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a ...
 9-409 1.56e-89

Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous hydrogen-bonds and van der Waals contacts, in particular H-bonding of residues in a turn between the first strand and the subsequent helix of the Rossmann-fold topology. Characteristically, this turn exhibits a consensus binding pattern similar to GXGXXG, in which the first 2 glycines participate in NAD(P)-binding, and the third facilitates close packing of the helix to the beta-strand. Typically, proteins in this family contain a second domain in addition to the NADB domain, which is responsible for specifically binding a substrate and catalyzing a particular enzymatic reaction.


The actual alignment was detected with superfamily member pfam04820:

Pssm-ID: 473865 [Multi-domain]  Cd Length: 457  Bit Score: 281.14  E-value: 1.56e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTLAALVAKQ---GHRVVVLEKENFPRYQIGESLLPStIHGVCRLSGAADD--LAKAGFPLKRGGTF-R 82
Cdd:pfam04820   1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESEEIGTVGVGEATIPS-IRTFNRMLGIDEAefLRATQATFKLGIRFeD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   83 WGARPEPWTFAFSV-----------------------------------------SPRMAGPTSV------AYQVERSKF 115
Cdd:pfam04820  80 WGRRGERYIHPFGVtghpidgvpfhhywlrlrargfagplddyclpavaalagkfSPPPKDPRSGlsglsyAYHFDAALY 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  116 DDILLKNARKQGADVREGCSVRGVIEEGERVHGLTYADadgnEREIRARYVVDASGNKSRLYNKV--GGTREYSDFF--- 190
Cdd:pfam04820 160 ARFLRRNAEARGVTRVEGKVVDVQLDADGFVTSLRLED----GREVEADLFIDCSGFRGLLIEQAlkTGYEDWSDWLpcd 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  191 RSLALFGYFENGkrmPEPNRFNIlcvAFESGWFWYIPLSDTLTSvGAVVRREMAekiqgDPEKALRALIDECPMIADHLS 270
Cdd:pfam04820 236 RALAVQCESVGP---PEPYTRAT---AHDAGWRWRIPLQHRLGN-GYVYSSAHA-----DDDEALAELLANLGGIPLAEP 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  271 DATRVTEGQygeirvrkdysyhHTTFTRPGMMLVGDAACFVDPVFSSGVHLATYssllAARSLNSVLEGKVDEDAAMKEF 350
Cdd:pfam04820 304 RLIRFTTGR-------------RKQAWVKNVVALGLASGFLEPLESTSIHLIQS----ALRRLLALFPDGGFDPAAIAEY 366

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 106709971  351 EARYRREYGVFYEFLVSFYEMHRDENSYFWQAKKvTANNEPELQAFVELIGGVSSGEQG 409
Cdd:pfam04820 367 NRRIAREYERIRDFIILHYKATKRDDTPFWRDCR-TMEIPDSLAEKIELFRGRGRVFRG 424
 
Name Accession Description Interval E-value
Trp_halogenase pfam04820
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ...
 9-409 1.56e-89

Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.


Pssm-ID: 398475 [Multi-domain]  Cd Length: 457  Bit Score: 281.14  E-value: 1.56e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTLAALVAKQ---GHRVVVLEKENFPRYQIGESLLPStIHGVCRLSGAADD--LAKAGFPLKRGGTF-R 82
Cdd:pfam04820   1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESEEIGTVGVGEATIPS-IRTFNRMLGIDEAefLRATQATFKLGIRFeD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   83 WGARPEPWTFAFSV-----------------------------------------SPRMAGPTSV------AYQVERSKF 115
Cdd:pfam04820  80 WGRRGERYIHPFGVtghpidgvpfhhywlrlrargfagplddyclpavaalagkfSPPPKDPRSGlsglsyAYHFDAALY 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  116 DDILLKNARKQGADVREGCSVRGVIEEGERVHGLTYADadgnEREIRARYVVDASGNKSRLYNKV--GGTREYSDFF--- 190
Cdd:pfam04820 160 ARFLRRNAEARGVTRVEGKVVDVQLDADGFVTSLRLED----GREVEADLFIDCSGFRGLLIEQAlkTGYEDWSDWLpcd 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  191 RSLALFGYFENGkrmPEPNRFNIlcvAFESGWFWYIPLSDTLTSvGAVVRREMAekiqgDPEKALRALIDECPMIADHLS 270
Cdd:pfam04820 236 RALAVQCESVGP---PEPYTRAT---AHDAGWRWRIPLQHRLGN-GYVYSSAHA-----DDDEALAELLANLGGIPLAEP 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  271 DATRVTEGQygeirvrkdysyhHTTFTRPGMMLVGDAACFVDPVFSSGVHLATYssllAARSLNSVLEGKVDEDAAMKEF 350
Cdd:pfam04820 304 RLIRFTTGR-------------RKQAWVKNVVALGLASGFLEPLESTSIHLIQS----ALRRLLALFPDGGFDPAAIAEY 366

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 106709971  351 EARYRREYGVFYEFLVSFYEMHRDENSYFWQAKKvTANNEPELQAFVELIGGVSSGEQG 409
Cdd:pfam04820 367 NRRIAREYERIRDFIILHYKATKRDDTPFWRDCR-TMEIPDSLAEKIELFRGRGRVFRG 424
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-356 5.50e-54

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 182.86  E-value: 5.50e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  15 GGPAGSTLAALVAKQGHRVVVLEKENFPRYQI-GESLLPSTIHGVCRLsGAADDLAKAgfplkrggtfRWGARpepWTFA 93
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKIcGGGLLPRALEELEPL-GLDEPLERP----------VRGAR---FYSP 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  94 FSVSPRMAGPTSVAYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHgLTYADadgnEREIRARYVVDASGNK 173
Cdd:COG0644   67 GGKSVELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV-VRTGD----GEEIRADYVVDADGAR 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 174 SRLYNKVG---GTREYSDFFrsLALFGYFENGKRMPEPNRFNILCV--AFESGWFWYIPLSDTLTSVGAvvrremaekiq 248
Cdd:COG0644  142 SLLARKLGlkrRSDEPQDYA--LAIKEHWELPPLEGVDPGAVEFFFgeGAPGGYGWVFPLGDGRVSVGI----------- 208

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 249 gdpekalralidecpmiadhlsdatrvtegqygeirvrkDYSYHHTTFTRPGMMLVGDAACFVDPVFSSGVHLATYSSLL 328
Cdd:COG0644  209 ---------------------------------------PLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRL 249

                        330       340
                 ....*....|....*....|....*...
gi 106709971 329 AARSLNSVLEGKVDEDAAMKEFEARYRR 356
Cdd:COG0644  250 AAEAIAEALEGGDFSAEALAEYERRLRE 277
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-331 6.87e-40

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 145.92  E-value: 6.87e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRY-QIGESLLPSTIHGVcrlsgaaDDLAKAGFPLKRGGTFRWGar 86
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYkPCGGALSPRALEEL-------DLPGELIVNLVRGARFFSP-- 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   87 pepwtFAFSVSPRMagPTSVAYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHGLTyadaDGNEREIRARYV 166
Cdd:TIGR02032  72 -----NGDSVEIPI--ETELAYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIV----RGSEGTVTAKIV 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  167 VDASGNKSRLYNKVGGTREYSDFfrSLALFGYFENgKRMPEPNRFNILCVAF---ESGWFWYIPLSDTLTSVGAVVRREM 243
Cdd:TIGR02032 141 IGADGSRSIVAKKLGLKKEPREY--GVAARAEVEM-PDEEVDEDFVEVYIDRgivPGGYGWVFPKGDGTANVGVGSRSAE 217

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  244 AEKiqgDPEKALRALIDECPMIADhlsdaTRVTEGQYGEIRVRKDYSYHHttftRPGMMLVGDAACFVDPVFSSGVHLAT 323
Cdd:TIGR02032 218 EGE---DPKKYLKDFLARRPELKD-----AETVEVCGALIPIGRPDEKLV----RGNVLLVGDAAGHVNPLTGEGIYYAM 285


                  ....*...
gi 106709971  324 YSSLLAAR 331
Cdd:TIGR02032 286 RSGDIAAE 293
PRK06185 PRK06185
FAD-dependent oxidoreductase;
2-353 5.56e-19

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 88.76  E-value: 5.56e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   2 AAVTEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEK-ENFPRYQIGESLLPSTIHGVCRLsGAADDLAKAGFPLKRGGT 80
Cdd:PRK06185   1 MAEVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKhADFLRDFRGDTVHPSTLELMDEL-GLLERFLELPHQKVRTLR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  81 FRWGARpePWTFA-FSvspRMAGPTSVAYQVERSKFDDILLKNARKQ-GADVREGCSVRGVIEEGERVHGLTYADADGnE 158
Cdd:PRK06185  80 FEIGGR--TVTLAdFS---RLPTPYPYIAMMPQWDFLDFLAEEASAYpNFTLRMGAEVTGLIEEGGRVTGVRARTPDG-P 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 159 REIRARYVVDASGNKSRLYNKVG-GTREYS---DF--FR-------SLALFGYFENGKRMpepnrfnilcVAFESGWFWy 225
Cdd:PRK06185 154 GEIRADLVVGADGRHSRVRALAGlEVREFGapmDVlwFRlprepddPESLMGRFGPGQGL----------IMIDRGDYW- 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 226 iplsdtltSVGAVVRREMAEKIQGDPEKALRALIDE-CPMIADHLS-----DATRVtegqygeIRVRKDYSyhhTTFTRP 299
Cdd:PRK06185 223 --------QCGYVIPKGGYAALRAAGLEAFRERVAElAPELADRVAelkswDDVKL-------LDVRVDRL---RRWHRP 284

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 106709971 300 GMMLVGDAACFVDPVFSSGVHLATYSSLLAARSLNSVLEGKVDEDAAMKEFEAR 353
Cdd:PRK06185 285 GLLCIGDAAHAMSPVGGVGINLAIQDAVAAANILAEPLRRGRVSDRDLAAVQRR 338
 
Name Accession Description Interval E-value
Trp_halogenase pfam04820
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ...
 9-409 1.56e-89

Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.


Pssm-ID: 398475 [Multi-domain]  Cd Length: 457  Bit Score: 281.14  E-value: 1.56e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTLAALVAKQ---GHRVVVLEKENFPRYQIGESLLPStIHGVCRLSGAADD--LAKAGFPLKRGGTF-R 82
Cdd:pfam04820   1 KIVIVGGGTAGWMAAAALARAlkgGLDVTLVESEEIGTVGVGEATIPS-IRTFNRMLGIDEAefLRATQATFKLGIRFeD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   83 WGARPEPWTFAFSV-----------------------------------------SPRMAGPTSV------AYQVERSKF 115
Cdd:pfam04820  80 WGRRGERYIHPFGVtghpidgvpfhhywlrlrargfagplddyclpavaalagkfSPPPKDPRSGlsglsyAYHFDAALY 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  116 DDILLKNARKQGADVREGCSVRGVIEEGERVHGLTYADadgnEREIRARYVVDASGNKSRLYNKV--GGTREYSDFF--- 190
Cdd:pfam04820 160 ARFLRRNAEARGVTRVEGKVVDVQLDADGFVTSLRLED----GREVEADLFIDCSGFRGLLIEQAlkTGYEDWSDWLpcd 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  191 RSLALFGYFENGkrmPEPNRFNIlcvAFESGWFWYIPLSDTLTSvGAVVRREMAekiqgDPEKALRALIDECPMIADHLS 270
Cdd:pfam04820 236 RALAVQCESVGP---PEPYTRAT---AHDAGWRWRIPLQHRLGN-GYVYSSAHA-----DDDEALAELLANLGGIPLAEP 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  271 DATRVTEGQygeirvrkdysyhHTTFTRPGMMLVGDAACFVDPVFSSGVHLATYssllAARSLNSVLEGKVDEDAAMKEF 350
Cdd:pfam04820 304 RLIRFTTGR-------------RKQAWVKNVVALGLASGFLEPLESTSIHLIQS----ALRRLLALFPDGGFDPAAIAEY 366

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 106709971  351 EARYRREYGVFYEFLVSFYEMHRDENSYFWQAKKvTANNEPELQAFVELIGGVSSGEQG 409
Cdd:pfam04820 367 NRRIAREYERIRDFIILHYKATKRDDTPFWRDCR-TMEIPDSLAEKIELFRGRGRVFRG 424
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-356 5.50e-54

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 182.86  E-value: 5.50e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  15 GGPAGSTLAALVAKQGHRVVVLEKENFPRYQI-GESLLPSTIHGVCRLsGAADDLAKAgfplkrggtfRWGARpepWTFA 93
Cdd:COG0644    1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKIcGGGLLPRALEELEPL-GLDEPLERP----------VRGAR---FYSP 66

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  94 FSVSPRMAGPTSVAYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHgLTYADadgnEREIRARYVVDASGNK 173
Cdd:COG0644   67 GGKSVELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV-VRTGD----GEEIRADYVVDADGAR 141

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 174 SRLYNKVG---GTREYSDFFrsLALFGYFENGKRMPEPNRFNILCV--AFESGWFWYIPLSDTLTSVGAvvrremaekiq 248
Cdd:COG0644  142 SLLARKLGlkrRSDEPQDYA--LAIKEHWELPPLEGVDPGAVEFFFgeGAPGGYGWVFPLGDGRVSVGI----------- 208

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 249 gdpekalralidecpmiadhlsdatrvtegqygeirvrkDYSYHHTTFTRPGMMLVGDAACFVDPVFSSGVHLATYSSLL 328
Cdd:COG0644  209 ---------------------------------------PLGGPRPRLVGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRL 249

                        330       340
                 ....*....|....*....|....*...
gi 106709971 329 AARSLNSVLEGKVDEDAAMKEFEARYRR 356
Cdd:COG0644  250 AAEAIAEALEGGDFSAEALAEYERRLRE 277
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-331 6.87e-40

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 145.92  E-value: 6.87e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRY-QIGESLLPSTIHGVcrlsgaaDDLAKAGFPLKRGGTFRWGar 86
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYkPCGGALSPRALEEL-------DLPGELIVNLVRGARFFSP-- 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   87 pepwtFAFSVSPRMagPTSVAYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHGLTyadaDGNEREIRARYV 166
Cdd:TIGR02032  72 -----NGDSVEIPI--ETELAYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIV----RGSEGTVTAKIV 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  167 VDASGNKSRLYNKVGGTREYSDFfrSLALFGYFENgKRMPEPNRFNILCVAF---ESGWFWYIPLSDTLTSVGAVVRREM 243
Cdd:TIGR02032 141 IGADGSRSIVAKKLGLKKEPREY--GVAARAEVEM-PDEEVDEDFVEVYIDRgivPGGYGWVFPKGDGTANVGVGSRSAE 217

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  244 AEKiqgDPEKALRALIDECPMIADhlsdaTRVTEGQYGEIRVRKDYSYHHttftRPGMMLVGDAACFVDPVFSSGVHLAT 323
Cdd:TIGR02032 218 EGE---DPKKYLKDFLARRPELKD-----AETVEVCGALIPIGRPDEKLV----RGNVLLVGDAAGHVNPLTGEGIYYAM 285


                  ....*...
gi 106709971  324 YSSLLAAR 331
Cdd:TIGR02032 286 RSGDIAAE 293
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-359 2.66e-29

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 117.35  E-value: 2.66e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRYQI-GESLLPSTIHGVCRLsGAADDLAKAGFPLKRGGTFRW 83
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGrGIALSPRSLELLRRL-GLWDRLLARGAPIRGIRVRDG 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  84 GARPEPWTFAFSVSPRMAGptsvaYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHgLTYADadgnEREIRA 163
Cdd:COG0654   80 SDGRVLARFDAAETGLPAG-----LVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVT-VTLAD----GRTLRA 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 164 RYVVDASGNKSRLynkvggtreysdffRSLALFGYFEngkrmpepnrfnilcVAFESGWFWyiplsdtltsvgAVVRREM 243
Cdd:COG0654  150 DLVVGADGARSAV--------------RRLLGIGFTG---------------RDYPQRALW------------AGVRTEL 188

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 244 AEKIQGDPekalralidecpmiaDHLSDATRVTEGQYGEIRVRkdysyHHTTFTRPGMMLVGDAACFVDPVFSSGVHLAT 323
Cdd:COG0654  189 RARLAAAG---------------PRLGELLELSPRSAFPLRRR-----RAERWRRGRVVLLGDAAHTMHPLGGQGANLAL 248

                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 106709971 324 YSSLLAARSLNSVLEGKvDEDAAMKEFEARyRREYG 359
Cdd:COG0654  249 RDAAALAWKLAAALRGR-DDEAALARYERE-RRPRA 282
PRK06185 PRK06185
FAD-dependent oxidoreductase;
2-353 5.56e-19

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 88.76  E-value: 5.56e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   2 AAVTEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEK-ENFPRYQIGESLLPSTIHGVCRLsGAADDLAKAGFPLKRGGT 80
Cdd:PRK06185   1 MAEVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKhADFLRDFRGDTVHPSTLELMDEL-GLLERFLELPHQKVRTLR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  81 FRWGARpePWTFA-FSvspRMAGPTSVAYQVERSKFDDILLKNARKQ-GADVREGCSVRGVIEEGERVHGLTYADADGnE 158
Cdd:PRK06185  80 FEIGGR--TVTLAdFS---RLPTPYPYIAMMPQWDFLDFLAEEASAYpNFTLRMGAEVTGLIEEGGRVTGVRARTPDG-P 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 159 REIRARYVVDASGNKSRLYNKVG-GTREYS---DF--FR-------SLALFGYFENGKRMpepnrfnilcVAFESGWFWy 225
Cdd:PRK06185 154 GEIRADLVVGADGRHSRVRALAGlEVREFGapmDVlwFRlprepddPESLMGRFGPGQGL----------IMIDRGDYW- 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 226 iplsdtltSVGAVVRREMAEKIQGDPEKALRALIDE-CPMIADHLS-----DATRVtegqygeIRVRKDYSyhhTTFTRP 299
Cdd:PRK06185 223 --------QCGYVIPKGGYAALRAAGLEAFRERVAElAPELADRVAelkswDDVKL-------LDVRVDRL---RRWHRP 284

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....
gi 106709971 300 GMMLVGDAACFVDPVFSSGVHLATYSSLLAARSLNSVLEGKVDEDAAMKEFEAR 353
Cdd:PRK06185 285 GLLCIGDAAHAMSPVGGVGINLAIQDAVAAANILAEPLRRGRVSDRDLAAVQRR 338
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
1-174 1.07e-17

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 85.73  E-value: 1.07e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   1 MAAVTEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKE----NFPR-----------YQ---IGESLLPSTI--HGVCR 60
Cdd:PRK06183   4 QHPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWptlyDLPRavgiddealrvLQaigLADEVLPHTTpnHGMRF 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  61 LSGAADDLAKagFPLKRGGTFRWGARpepwtFAFsvsprmagptsvaYQVErskFDDILLKN-ARKQGADVREGCSVRGV 139
Cdd:PRK06183  84 LDAKGRCLAE--IARPSTGEFGWPRR-----NAF-------------HQPL---LEAVLRAGlARFPHVRVRFGHEVTAL 140

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 106709971 140 IEEGERVHgLTYADADGNEREIRARYVVDASGNKS 174
Cdd:PRK06183 141 TQDDDGVT-VTLTDADGQRETVRARYVVGCDGANS 174
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 7-344 7.52e-17

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 81.60  E-value: 7.52e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    7 EFDVAVVGGGPAGSTLAALVAKQGHRVVVLEK----ENFPRyqiGESLLPSTIhGVCRLSGAADDLAKAGFPLKRGGTFR 82
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERhattSVLPR---AHGLNQRTM-ELLRQAGLEDRILAEGVPHEGMGLAF 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   83 WGARPePWTFAFSVSPRMagpTSVAYQVErskFDDILLKNARKQGADVREGCSVRGVIEEGERVHGLTYADADGNEREIR 162
Cdd:pfam01494  77 YNTRR-RADLDFLTSPPR---VTVYPQTE---LEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVR 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  163 ARYVVDASGNKSRLYNKVGGTREYSDFFRSLALFGYFE-NGKRMPEPNRFNI-LCVAFESGWFWYIPLSDtLTSVGAVVR 240
Cdd:pfam01494 150 AKYLVGCDGGRSPVRKTLGIEFEGFEGVPFGSLDVLFDaPDLSDPVERAFVHyLIYAPHSRGFMVGPWRS-AGRERYYVQ 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  241 REMAEKIQGDPEKALRaliDECPMIAdHLSDATRVTEGQYGEIRVRKDYSYHHTTFTRPGMMLVGDAACFVDPVFSSGVH 320
Cdd:pfam01494 229 VPWDEEVEERPEEFTD---EELKQRL-RSIVGIDLALVEILWKSIWGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLN 304

                         330       340
                  ....*....|....*....|....
gi 106709971  321 LATYSSLLAARSLNSVLEGKVDED 344
Cdd:pfam01494 305 TAIQDAFNLAWKLAAVLRGQAGES 328
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 9-171 3.42e-12

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 68.02  E-value: 3.42e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTlAALVA-KQGHRVVVLEKENFP----RYQIGESLLPSTIHGVCRLSGAADDLAKAgfpLKRGGTFRW 83
Cdd:pfam12831   1 DVVVVGGGPAGVA-AAIAAaRAGAKVLLVERRGFLggmlTSGLVGPDMGFYLNKEQVVGGIAREFRQR---LRARGGLPG 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   84 garpepwtfafsvsPRMAGPTSVAYQVERSK--FDDILLKNarkqGADVREGCSVRGVIEEGERVHGLTYADADGnEREI 161
Cdd:pfam12831  77 --------------PYGLRGGWVPFDPEVAKavLDEMLAEA----GVTVLLHTRVVGVVKEGGRITGVTVETKGG-RITI 137

                         170
                  ....*....|
gi 106709971  162 RARYVVDASG 171
Cdd:pfam12831 138 RAKVFIDATG 147
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 5-171 6.13e-12

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 67.55  E-value: 6.13e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRyqiGesllpSTIH--GVCRLSGAA-------DDLAKAGFPL 75
Cdd:COG1053    1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRG---G-----HTAAaqGGINAAGTNvqkaageDSPEEHFYDT 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  76 KRGGtfRWGARPEP-----------------WTFAFSVSPRMAGPTSVAYQVERS--KFD-------DILLKNARKQGAD 129
Cdd:COG1053   73 VKGG--DGLADQDLvealaeeapeaidwleaQGVPFSRTPDGRLPQFGGHSVGRTcyAGDgtghallATLYQAALRLGVE 150

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 106709971 130 VREGCSVRGVIEEGERVHGLTYADADGNEREIRARYVVDASG 171
Cdd:COG1053  151 IFTETEVLDLIVDDGRVVGVVARDRTGEIVRIRAKAVVLATG 192
HI0933_like pfam03486
HI0933-like protein;
8-183 4.19e-11

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 64.52  E-value: 4.19e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENfpryQIGESLLpstIHGVCR-----LSGAADDLAkAGFPlkRGGTFR 82
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGK----KLGRKIL---ISGGGRcnvtnLSEEPDNFL-SRYP--GNPKFL 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   83 WGA--RPEPWTF-AFSvspRMAGptsVAYQVERS--------KFDDI---LLKNARKQGADVREGCSVRGVIEEGERVHG 148
Cdd:pfam03486  71 KSAlsRFTPWDFiAFF---ESLG---VPLKEEDHgrlfpdsdKASDIvdaLLNELKELGVKIRLRTRVLSVEKDDDGRFR 144

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 106709971  149 LTYadadgNEREIRARYVVDASGNKSrlYNKVGGT 183
Cdd:pfam03486 145 VKT-----GGEELEADSLVLATGGLS--WPKTGST 172
PRK09126 PRK09126
FAD-dependent hydroxylase;
8-356 4.85e-11

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 64.58  E-value: 4.85e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENF-----PRYQIGESLLPSTIHGVCRLSGAADDLAKAG-FPLKRGGTF 81
Cdd:PRK09126   4 SDIVVVGAGPAGLSFARSLAGSGLKVTLIERQPLaaladPAFDGREIALTHASREILQRLGAWDRIPEDEiSPLRDAKVL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  82 RwGARPEPWTFAFSVSPRMAGPTSVA-YQVERSKFDDIllknARKQGADVREGCSVRGVIEeGERVHGLTYADAdgneRE 160
Cdd:PRK09126  84 N-GRSPFALTFDARGRGADALGYLVPnHLIRRAAYEAV----SQQDGIELLTGTRVTAVRT-DDDGAQVTLANG----RR 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 161 IRARYVVDASGNKSRLYNKVGGTREYSDFFRSLALFgyfengkRM--PEPNRFnilcVAFEsgWFWY------IPLSDTL 232
Cdd:PRK09126 154 LTARLLVAADSRFSATRRQLGIGADMHDFGRTMLVC-------RMrhELPHHH----TAWE--WFGYgqtlalLPLNGHL 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 233 TSVGAVVRremAEKIQgdpekALRALIDEcpmiaDHLSDATRVTEGQYGEIRV---RKDY----SYHHTtFTRPGMMLVG 305
Cdd:PRK09126 221 SSLVLTLP---PDQIE-----ALLALDPE-----AFAAEVTARFKGRLGAMRLvssRHAYplvaVYAHR-FVAKRFALIG 286

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 106709971 306 DAACFVDPVFSSGVHLATYSSLLAARSLNSVLEGKVDEDAA--MKEFEARYRR 356
Cdd:PRK09126 287 DAAVGMHPVTAHGFNLGLKGQDILARLILAAARRGQDIGAAslLERYERKHRL 339
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
6-171 1.32e-10

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 63.00  E-value: 1.32e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   6 EEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKeNFPRY--------QIGESLLPSTIHGVCRLSGAA----DDLAKA-- 71
Cdd:COG0665    1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLER-GRPGSgasgrnagQLRPGLAALADRALVRLAREAldlwRELAAElg 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  72 -GFPLKRGGTFRWGARPEPWTF---------AFSVSPRMAGPTSVAYQVERSKFDDI--------------------LLK 121
Cdd:COG0665   80 iDCDFRRTGVLYLARTEAELAAlraeaealrALGLPVELLDAAELREREPGLGSPDYagglydpddghvdpaklvraLAR 159

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 106709971 122 NARKQGADVREGCSVRGVIEEGERVHGLTyaDADGnerEIRARYVVDASG 171
Cdd:COG0665  160 AARAAGVRIREGTPVTGLEREGGRVTGVR--TERG---TVRADAVVLAAG 204
PRK06126 PRK06126
hypothetical protein; Provisional
 1-203 6.09e-10

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 61.55  E-value: 6.09e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   1 MAAVTEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRYQIGESLLPSTIHGVCRLSGAADDLAKAGFP------ 74
Cdd:PRK06126   1 AMENTSETPVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRLGIADEVRSAGLPvdyptd 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  75 -----------LKRggtFRWGARPEpwtfAFSVSPRMAGPTSVA---YQVERSKFDDILLKNARKQ-GADVREGCSVRGV 139
Cdd:PRK06126  81 iayftrltgyeLAR---FRLPSARE----AITPVGGPDGSWPSPelpHRIPQKYLEPILLEHAAAQpGVTLRYGHRLTDF 153

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 106709971 140 IEEGERVHGLTYADADGNEREIRARYVVDASGNKSRLYNKVG----GT----REYSDFFRSLALFGYFENGK 203
Cdd:PRK06126 154 EQDADGVTATVEDLDGGESLTIRADYLVGCDGARSAVRRSLGisyeGTsglqRDLSIYIRAPGLAALVGHDP 225
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 10-181 4.32e-09

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 58.73  E-value: 4.32e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKEnfPRYQIGEsllpstiHGVC----------RLsGAADDLAKAGFPLKRGG 79
Cdd:PRK08132  26 VVVVGAGPVGLALAIDLAQQGVPVVLLDDD--DTLSTGS-------RAICfakrsleifdRL-GCGERMVDKGVSWNVGK 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  80 TFRwgaRPEPwTFAFSVSP----RMAGPTSVA-YQVErskfdDILLKNARKQ-GADVREGCSVRGVIEEGERVHgLTYAD 153
Cdd:PRK08132  96 VFL---RDEE-VYRFDLLPepghRRPAFINLQqYYVE-----GYLVERAQALpNIDLRWKNKVTGLEQHDDGVT-LTVET 165

                        170       180
                 ....*....|....*....|....*...
gi 106709971 154 ADGNEReIRARYVVDASGNKSRLYNKVG 181
Cdd:PRK08132 166 PDGPYT-LEADWVIACDGARSPLREMLG 192
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-176 5.41e-09

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 58.07  E-value: 5.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRYQIG--------------------ESLLPSTIHGVCRLS------ 62
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAwssggidalgnppqggidspELHPTDTLKGLDELAdhpyve 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   63 -------GAADDLAKAGFPLKRGGTFRWGARPE-----PWTFAFSVSPRMAGPTSVAYQVERskfddiLLKNARKQGADV 130
Cdd:pfam00890  81 afveaapEAVDWLEALGVPFSRTEDGHLDLRPLgglsaTWRTPHDAADRRRGLGTGHALLAR------LLEGLRKAGVDF 154

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 106709971  131 REGCSVRGVIEEGERVHGLT-YADADGNEREIRARY-VVDASGNKSRL 176
Cdd:pfam00890 155 QPRTAADDLIVEDGRVTGAVvENRRNGREVRIRAIAaVLLATGGFGRL 202
PRK06184 PRK06184
hypothetical protein; Provisional
 9-174 8.08e-09

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 57.69  E-value: 8.08e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP-RYQIGESLLPSTIHGVCRLsGAADDLAKAGFPLKRGGTFRWGARP 87
Cdd:PRK06184   5 DVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPfPGSRGKGIQPRTQEVFDDL-GVLDRVVAAGGLYPPMRIYRDDGSV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  88 EPWTFAFSVSPRMAGPTSVAYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHGlTYADADGnEREIRARYVV 167
Cdd:PRK06184  84 AESDMFAHLEPTPDEPYPLPLMVPQWRTERILRERLAELGHRVEFGCELVGFEQDADGVTA-RVAGPAG-EETVRARYLV 161


                 ....*..
gi 106709971 168 DASGNKS 174
Cdd:PRK06184 162 GADGGRS 168
PRK08244 PRK08244
monooxygenase;
8-174 1.88e-07

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 53.59  E-value: 1.88e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP-RYQIGESLLPSTIHgVCRLSGAADDLAKAGFPLKRggtfrwgar 86
Cdd:PRK08244   3 YEVIIIGGGPVGLMLASELALAGVKTCVIERLKETvPYSKALTLHPRTLE-ILDMRGLLERFLEKGRKLPS--------- 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  87 pepWTFA-------FSVSPRMAGPTSVAYQVERSKfddILLKNARKQGADVREGCSVRGVIEEGERVHgLTYADADGnER 159
Cdd:PRK08244  73 ---GHFAgldtrldFSALDTSSNYTLFLPQAETEK---VLEEHARSLGVEIFRGAEVLAVRQDGDGVE-VVVRGPDG-LR 144

                        170
                 ....*....|....*
gi 106709971 160 EIRARYVVDASGNKS 174
Cdd:PRK08244 145 TLTSSYVVGADGAGS 159
PRK06847 PRK06847
hypothetical protein; Provisional
 1-184 2.08e-07

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 52.95  E-value: 2.08e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   1 MAAVTeefDVAVVGGGPAGSTLAALVAKQGHRVVVLE-KENFPRYQIGESLLPSTIHGVCRLsGAADDLAKAGFPlkrgg 79
Cdd:PRK06847   1 MAAVK---KVLIVGGGIGGLSAAIALRRAGIAVDLVEiDPEWRVYGAGITLQGNALRALREL-GVLDECLEAGFG----- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  80 tFRW-GARPEPWTFAFSV-SPRMAG---PTSVAyqVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHGLTyadA 154
Cdd:PRK06847  72 -FDGvDLFDPDGTLLAELpTPRLAGddlPGGGG--IMRPALARILADAARAAGADVRLGTTVTAIEQDDDGVTVTF---S 145

                        170       180       190
                 ....*....|....*....|....*....|
gi 106709971 155 DGNEReiRARYVVDASGNKSRLYNKVGGTR 184
Cdd:PRK06847 146 DGTTG--RYDLVVGADGLYSKVRSLVFPDE 173
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-176 8.25e-07

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 50.86  E-value: 8.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRY--------QIGESLLPSTIHGVCRLSGAA----DDLAKAG---F 73
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgasgrnagLIHPGLRYLEPSELARLALEAldlwEELEEELgidC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   74 PLKRGGTF-------------------RWGARPEPWTFA-----FSVSPRMAG----PTSVayQVERSKFDDILLKNARK 125
Cdd:pfam01266  81 GFRRCGVLvlardeeeealekllaalrRLGVPAELLDAEelrelEPLLPGLRGglfyPDGG--HVDPARLLRALARAAEA 158

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 106709971  126 QGADVREGCSVRGvIEEGERVHGLtyadadgnEREIRARYVVDASGNKSRL 176
Cdd:pfam01266 159 LGVRIIEGTEVTG-IEEEGGVWGV--------VTTGEADAVVNAAGAWADL 200
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
12-42 1.54e-06

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 45.60  E-value: 1.54e-06
                          10        20        30
                  ....*....|....*....|....*....|.
gi 106709971   12 VVGGGPAGSTLAALVAKQGHRVVVLEKENFP 42
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRL 31
PRK11445 PRK11445
FAD-binding protein;
7-178 1.88e-06

FAD-binding protein;


Pssm-ID: 183139 [Multi-domain]  Cd Length: 351  Bit Score: 50.06  E-value: 1.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   7 EFDVAVVGGGPAGSTLAALVAKQgHRVVVLEKenfpRYQIGESLLPSTIHGVCRlSGAADDLAKAGFPLkrggtfrwgar 86
Cdd:PRK11445   1 HYDVAIIGLGPAGSALARLLAGK-MKVIAIDK----KHQCGTEGFSKPCGGLLA-PDAQKSFAKDGLTL----------- 63

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  87 P-----EPWTFAFSvSPRMAGPTSVAYQ-----VERSKFdDILLKNARKQGADVREGCSVRGVIEEGERVHgLTYaDADG 156
Cdd:PRK11445  64 PkdviaNPQIFAVK-TIDLANSLTRNYQrsyinIDRHKF-DLWLKSLIPASVEVYHNSLCRKIWREDDGYH-VIF-RADG 139

                        170       180
                 ....*....|....*....|..
gi 106709971 157 NEREIRARYVVDASGNKSRLYN 178
Cdd:PRK11445 140 WEQHITARYLVGADGANSMVRR 161
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 10-46 2.16e-06

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 50.13  E-value: 2.16e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP----RYQI 46
Cdd:COG0493  124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPggllRYGI 164
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 5-37 2.50e-06

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 49.83  E-value: 2.50e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 106709971   5 TEEFDVAVVGGGPAGSTLAA-LVAKQGHRVVVLE 37
Cdd:COG2303    2 LEEYDYVIVGAGSAGCVLANrLSEDAGLRVLLLE 35
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 5-41 2.77e-06

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 49.79  E-value: 2.77e-06
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENF 41
Cdd:PRK06292   1 MEKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPL 37
TIGR00275 TIGR00275
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ...
 11-193 3.71e-06

flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 272992 [Multi-domain]  Cd Length: 400  Bit Score: 49.13  E-value: 3.71e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   11 AVVGGGPAGSTLAALVAKQGHRVVVLEKENfpryQIGESLLPSTiHGVCRLSGAAD-DLAKAGFPlkRGGTFrwgARpeP 89
Cdd:TIGR00275   1 IIIGGGAAGLMAAITAARAGLSVLLLEKNK----KIGKKLLISG-GGRCNLTNSCPtPEFVAYYP--RNGKF---LR--S 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   90 WTFAFSVSPRMA-----GptsVAYQVERSK--FD---------DILLKNARKQGADVREGCSVRGVIEEGERVHGLTyad 153
Cdd:TIGR00275  69 ALSRFSNKDLIDffeslG---LELKVEEDGrvFPcsdsaadvlDALLNELKELGVEILTNSKVKSIEKEDGGFGVET--- 142

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 106709971  154 adgNEREIRARYVVDASGNKSrlYNKVGGTREYSDFFRSL 193
Cdd:TIGR00275 143 ---SGGEYEADKVIIATGGLS--YPQLGSTGDGYEIAESL 177
PRK07045 PRK07045
putative monooxygenase; Reviewed
 9-352 4.88e-06

putative monooxygenase; Reviewed


Pssm-ID: 136171 [Multi-domain]  Cd Length: 388  Bit Score: 48.75  E-value: 4.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRYQIGESLL-PSTIhGVCRLSGAADDLAKAGFPLKRGGTFRWGARP 87
Cdd:PRK07045   7 DVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLkPSGI-GVVRAMGLLDDVFAAGGLRRDAMRLYHDKEL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  88 EPWTFAFSVSPR---MAGPTSVAYQVERSKFDDIllknarkqgADVREGCSVRgvIEEGERvhgltyaDADG-------- 156
Cdd:PRK07045  86 IASLDYRSASALgyfILIPCEQLRRLLLAKLDGL---------PNVRLRFETS--IERIER-------DADGtvtsvtls 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 157 NEREIRARYVVDASGNKSRLYNKVGGTREYSDFFRSLALFGYFENGKRMPEPNRfniLCVAFESGWFWYIPLSDTLTS-V 235
Cdd:PRK07045 148 DGERVAPTVLVGADGARSMIRDDVLRMPAERVPYATPMAFGTIALTDSVRECNR---LYVDSNQGLAYFYPIGDQATRlV 224

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 236 GAVVRREMAEKIQGDPEKALRALIDEcpMIADHLSDATRVTEG--QYGEIRV-RKDYSYHHttftRPGMMLVGDAACFVD 312
Cdd:PRK07045 225 VSFPADEMQGYLADTTRTKLLARLNE--FVGDESADAMAAIGAgtAFPLIPLgRMNLDRYH----KRNVVLLGDAAHSIH 298

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 106709971 313 PVFSSGVHLATYSSLLAARSLNSVLEGKVDEDAAMKEFEA 352
Cdd:PRK07045 299 PITGQGMNLAIEDAGELGACLDLHLSGQIALADALERFER 338
PRK07538 PRK07538
hypothetical protein; Provisional
 9-177 6.30e-06

hypothetical protein; Provisional


Pssm-ID: 236046 [Multi-domain]  Cd Length: 413  Bit Score: 48.35  E-value: 6.30e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKEnfPRYQ---IGESLLPstiHGVCRLS--GAADDLAKAGFPLK------R 77
Cdd:PRK07538   2 KVLIAGGGIGGLTLALTLHQRGIEVVVFEAA--PELRplgVGINLLP---HAVRELAelGLLDALDAIGIRTRelayfnR 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  78 GGTFRWGarpEPwtfafsvSPRMAGPTSVAYQVERSKFDDILLKNARKQ-GAD-VREGCSVRGVIEEGERVHGLTYADAD 155
Cdd:PRK07538  77 HGQRIWS---EP-------RGLAAGYDWPQYSIHRGELQMLLLDAVRERlGPDaVRTGHRVVGFEQDADVTVVFLGDRAG 146

                        170       180
                 ....*....|....*....|..
gi 106709971 156 GNEREIRARYVVDASGNKSRLY 177
Cdd:PRK07538 147 GDLVSVRGDVLIGADGIHSAVR 168
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 5-42 6.70e-06

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 48.69  E-value: 6.70e-06
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP 42
Cdd:COG1233    1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTP 38
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
11-174 1.10e-05

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 47.74  E-value: 1.10e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  11 AVVGGGPAGsTLAALVAKQ-GHRVVVLEKENfpryQIGESLLpstIHGVCRL----SGAADDLAKagfplkrggtfRWGA 85
Cdd:COG2081    1 IVIGAGAAG-LMAAITAAErGARVLLLEKNP----KVGRKIL---ISGGGRCnftnSEPLPEFLN-----------YYGG 61

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  86 RPEPWTFAFSV-SPR--MA-----GptsVAYQVERS--------KFDDI---LLKNARKQGADVREGCSVRGVIEEGErv 146
Cdd:COG2081   62 NPHFLKSALSRfTPEdlIAffeglG---IETKEESSgrvfpdssKASDIlraLLAELREAGVEIRLRTRVTGIEKEDG-- 136

                        170       180
                 ....*....|....*....|....*...
gi 106709971 147 hGLTYADADGneREIRARYVVDASGNKS 174
Cdd:COG2081  137 -GFGVETPDG--ETVRADAVVLATGGLS 161
carotene-cycl TIGR01790
lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases ...
 9-182 1.13e-05

lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which form beta and delta carotene, respectively) from bacteria and plants as well as the plant capsanthin/capsorubin and neoxanthin cyclases which appear to have evolved from the plant lycopene cyclases. The plant lycopene epsilon cyclases also transform neurosporene to alpha zeacarotene.


Pssm-ID: 130850 [Multi-domain]  Cd Length: 388  Bit Score: 47.43  E-value: 1.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971    9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEkenfPRYQIGesllpstihGVCRLSGAADDLAKAGfpLKRGGTFRWgarPE 88
Cdd:TIGR01790   1 DLAVIGGGPAGLAIALELARPGLRVQLIE----PHPPIP---------GNHTYGVWDDDLSDLG--LADCVEHVW---PD 62

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   89 PWTFAFSVSPRMAGptsVAY-QVERSKFDDILLKNARKQGADVREGcSVRGVIEEGERVHGLTYADAdgneREIRARYVV 167
Cdd:TIGR01790  63 VYEYRFPKQPRKLG---TAYgSVDSTRLHEELLQKCPEGGVLWLER-KAIHAEADGVALSTVYCAGG----QRIQARLVI 134

                         170
                  ....*....|....*
gi 106709971  168 DASGNKSRLYNKVGG 182
Cdd:TIGR01790 135 DARGFGPLVQYVRFP 149
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 10-38 1.79e-05

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 47.10  E-value: 1.79e-05
                         10        20
                 ....*....|....*....|....*....
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEK 38
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEA 171
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 5-41 1.92e-05

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 47.00  E-value: 1.92e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENF 41
Cdd:COG1249    1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRL 37
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
1-38 3.08e-05

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 46.57  E-value: 3.08e-05
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 106709971   1 MAAVTEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEK 38
Cdd:PRK07843   1 MAMTVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEK 38
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 7-364 3.16e-05

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 46.38  E-value: 3.16e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   7 EFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENF--PRYQIGESLLPSTIHGVCRLsGAADDLAKAGFPLKRGGTFR-- 82
Cdd:PTZ00367  33 DYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFskPDRIVGELLQPGGVNALKEL-GMEECAEGIGMPCFGYVVFDhk 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  83 -------WGARPEPWTFAFsvsprmagptsvayqverSKFDDILLKNAR---KQGADVREGcSVRGVIEEG----ERVHG 148
Cdd:PTZ00367 112 gkqvklpYGAGASGVSFHF------------------GDFVQNLRSHVFhncQDNVTMLEG-TVNSLLEEGpgfsERAYG 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 149 LTYADADGNE---------------------REIRARYVVDASGNKSRLYNKVggtREYSDFFRSLALF-GYFENGKRMP 206
Cdd:PTZ00367 173 VEYTEAEKYDvpenpfredppsanpsattvrKVATAPLVVMCDGGMSKFKSRY---QHYTPASENHSHFvGLVLKNVRLP 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971 207 EPNRFNILCVafESGWFWYIPLSDTLTSVGAVVRREMAEKIqgdpEKALRALIDE-CPMIADHLSDATRVTEGQYGEIRV 285
Cdd:PTZ00367 250 KEQHGTVFLG--KTGPILSYRLDDNELRVLVDYNKPTLPSL----EEQSEWLIEDvAPHLPENMRESFIRASKDTKRIRS 323

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 106709971 286 RKDYSYHHTTFTRPGMMLVGDAACFVDPVFSSGVHLATYSSLLAARSLNSVLEGKVDEDAAMKEFEARYRREYGVFYEF 364
Cdd:PTZ00367 324 MPNARYPPAFPSIKGYVGIGDHANQRHPLTGGGMTCCFSDCIRLAKSLTGIKSLRSIDQNEMAEIEDAIQAAILSYARN 402
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-40 3.91e-05

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 45.98  E-value: 3.91e-05
                         10        20        30
                 ....*....|....*....|....*....|..
gi 106709971   9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKEN 40
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASD 34
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
5-40 4.47e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 45.91  E-value: 4.47e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAK-QGHRVVVLEKEN 40
Cdd:COG0579    2 MEMYDVVIIGAGIVGLALARELSRyEDLKVLVLEKED 38
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 2-171 5.67e-05

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 45.24  E-value: 5.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   2 AAVTEEFDVAVVGGGPAGstLAALVA--KQGHRVVVLEKenfpryqigesllpstihgvcrlsgaADDLakagfplkrGG 79
Cdd:COG2072    1 TAATEHVDVVVIGAGQAG--LAAAYHlrRAGIDFVVLEK--------------------------ADDV---------GG 43

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  80 TFRW----GAR--PEPWTFAFS------VSPR-MAGPTSVAYqverskFDDIllknARKQGADVRegcsvrgvIEEGERV 146
Cdd:COG2072   44 TWRDnrypGLRldTPSHLYSLPffpnwsDDPDfPTGDEILAY------LEAY----ADKFGLRRP--------IRFGTEV 105

                        170       180       190
                 ....*....|....*....|....*....|..
gi 106709971 147 HGLTYADADG-------NEREIRARYVVDASG 171
Cdd:COG2072  106 TSARWDEADGrwtvttdDGETLTARFVVVATG 137
mycofact_OYE_2 TIGR03997
mycofactocin system FadH/OYE family oxidoreductase 2; The yeast protein called old yellow ...
 10-46 9.61e-05

mycofactocin system FadH/OYE family oxidoreductase 2; The yeast protein called old yellow enzyme and FadH from Escherichia coli (2,4-dienoyl CoA reductase) are enzymes with 4Fe-4S, FMN, and FAD prosthetic groups, and interact with NADPH as well as substrate. Members of this related protein family occur in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). The function of this oxidoreductase is unknown.


Pssm-ID: 274912 [Multi-domain]  Cd Length: 644  Bit Score: 45.07  E-value: 9.61e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 106709971   10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRYQI 46
Cdd:TIGR03997 381 VLVVGGGPAGLEAAATAARRGHRVTLFEREDRLGGQV 417
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-37 1.02e-04

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 44.53  E-value: 1.02e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 106709971   1 MAAVTEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLE 37
Cdd:COG1231    1 MSRRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLE 37
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
9-39 1.07e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 44.85  E-value: 1.07e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 106709971   9 DVAVVGGGPAGSTlAAL-VAKQGHRVVVLEKE 39
Cdd:COG1148  142 RALVIGGGIAGMT-AALeLAEQGYEVYLVEKE 172
PLN02985 PLN02985
squalene monooxygenase
 3-214 1.80e-04

squalene monooxygenase


Pssm-ID: 178566 [Multi-domain]  Cd Length: 514  Bit Score: 44.12  E-value: 1.80e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   3 AVTEE-----FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKE-NFPRYQIGESLLPSTIHGVCRLsGAAD-----DLAKA 71
Cdd:PLN02985  34 AVAEErkdgaTDVIIVGAGVGGSALAYALAKDGRRVHVIERDlREPERMMGEFMQPGGRFMLSKL-GLEDclegiDAQKA 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  72 -GFPLKRGGTFRWGARP-EPWTFAFSVSPRMAGPTSVAYQVERSKFDdilLKNARkqgadVREGcSVRGVIEEGERVHGL 149
Cdd:PLN02985 113 tGMAVYKDGKEAVAPFPvDNNNFPYEPSARSFHNGRFVQRLRQKASS---LPNVR-----LEEG-TVKSLIEEKGVIKGV 183

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 106709971 150 TYADADGNEREIRARYVVDASGNksrlynkvggtreYSDFFRSLA---------LFGYFENGKRMPEPNRFNIL 214
Cdd:PLN02985 184 TYKNSAGEETTALAPLTVVCDGC-------------YSNLRRSLNdnnaevlsyQVGYISKNCRLEEPEKLHLI 244
PRK07233 PRK07233
hypothetical protein; Provisional
 10-42 2.20e-04

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 43.72  E-value: 2.20e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP 42
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQL 34
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 9-107 2.58e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 43.30  E-value: 2.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   9 DVAVVGGGPAGstLAALV--AKQGHRVVVLEKENFP-----RYQIGES---------LLPS---TIHGVCRLSGAADDLA 69
Cdd:COG3349    5 RVVVVGGGLAG--LAAAVelAEAGFRVTLLEARPRLggrarSFPDPDTglpidngqhVLLGcyrNTLDLLRRIGAADNLV 82

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 106709971  70 ---KAGFPLKRGGTFRWGARPEPWTFAFSVSPRMAGPTSVA 107
Cdd:COG3349   83 gpePLQFPLPGGRRWTLRAPRLPAPLHLLRALLRAPGLSLA 123
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
7-37 3.68e-04

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 42.63  E-value: 3.68e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 106709971   7 EFDVAVVGGGPAGSTLAALVAKQGHRVVVLE 37
Cdd:PRK07608   5 KFDVVVVGGGLVGASLALALAQSGLRVALLA 35
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
7-171 3.89e-04

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 42.94  E-value: 3.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   7 EFDVAVVGGGPAGSTlAALVAK-QGHRVVVLEK---------------------------------ENF----------- 41
Cdd:PRK08274   4 MVDVLVIGGGNAALC-AALAAReAGASVLLLEAaprewrggnsrhtrnlrcmhdapqdvlvgaypeEEFwqdllrvtggr 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  42 -----PRYQIGESllpSTI------HGV---CRLSGAAddlakagfPLKRGGTFRWGArpepwtfafsvsprmaGPTSVa 107
Cdd:PRK08274  83 tdealARLLIRES---SDCrdwmrkHGVrfqPPLSGAL--------HVARTNAFFWGG----------------GKALV- 134

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 106709971 108 yqverskfdDILLKNARKQGADVREGCSVRGVIEEGERVHGLTYADADGNEREIRARYVVDASG 171
Cdd:PRK08274 135 ---------NALYRSAERLGVEIRYDAPVTALELDDGRFVGARAGSAAGGAERIRAKAVVLAAG 189
glpA PRK11101
anaerobic glycerol-3-phosphate dehydrogenase subunit A;
7-171 4.06e-04

anaerobic glycerol-3-phosphate dehydrogenase subunit A;


Pssm-ID: 236847 [Multi-domain]  Cd Length: 546  Bit Score: 43.08  E-value: 4.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   7 EFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP---------------RYQ----------IGESLLPSTI--HGVC 59
Cdd:PRK11101   6 ETDVIIIGGGATGAGIARDCALRGLRCILVERHDIAtgatgrnhgllhsgaRYAvtdaesarecISENQILKRIarHCVE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  60 RLSG-----AADDLA----------KAGFPLKRGgTFRWGARPEPwtfafSVSPRMAGptsvAYQVERSKFDDILLK--- 121
Cdd:PRK11101  86 PTDGlfitlPEDDLAfqatfiraceEAGIEAEAI-DPQQALILEP-----AVNPALIG----AVKVPDGTVDPFRLTaan 155

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 106709971 122 --NARKQGADVREGCSVRGVIEEGERVHGLTYAD-ADGNEREIRARYVVDASG 171
Cdd:PRK11101 156 mlDAKEHGAQILTYHEVTGLIREGDTVCGVRVRDhLTGETQEIHAPVVVNAAG 208
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 6-37 4.16e-04

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 42.45  E-value: 4.16e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 106709971   6 EEFDVAVVGGGPAGSTLAALVAKQGHRVVVLE 37
Cdd:PRK08849   2 NKYDIAVVGGGMVGAATALGFAKQGRSVAVIE 33
PRK12843 PRK12843
FAD-dependent oxidoreductase;
6-71 4.67e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 42.80  E-value: 4.67e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 106709971   6 EEFDVAVVGGGPAGSTlAALVAKQ-GHRVVVLEKENF----PRYQIGESLLPSTIHGVcrLSGAADDLAKA 71
Cdd:PRK12843  15 AEFDVIVIGAGAAGMS-AALFAAIaGLKVLLVERTEYvggtTATSAGTTWIPGTRHGL--AVGPDDSLEAA 82
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 10-39 5.11e-04

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 42.46  E-value: 5.11e-04
                         10        20        30
                 ....*....|....*....|....*....|
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKE 39
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFERA 175
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
 10-55 6.31e-04

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 42.42  E-value: 6.31e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP----RYQIGESLLPSTI 55
Cdd:PRK12778 434 VAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIggvlKYGIPEFRLPKKI 483
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 10-86 8.20e-04

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 42.02  E-value: 8.20e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP----RYQIGESLLPSTIhgvcrlsgAADDLAkagfPL-KRGGTFRWG 84
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAggmmRYGIPRFRLPESV--------IDADIA----PLrAMGAEFRFN 263


                 ..
gi 106709971  85 AR 86
Cdd:PRK12814 264 TV 265
PRK07364 PRK07364
FAD-dependent hydroxylase;
7-37 8.33e-04

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 41.54  E-value: 8.33e-04
                         10        20        30
                 ....*....|....*....|....*....|.
gi 106709971   7 EFDVAVVGGGPAGSTLAALVAKQGHRVVVLE 37
Cdd:PRK07364  18 TYDVAIVGGGIVGLTLAAALKDSGLRIALIE 48
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
7-59 1.14e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 41.30  E-value: 1.14e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 106709971   7 EFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENfpryQIGesllpstihGVC 59
Cdd:PRK05249   5 DYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYR----NVG---------GGC 44
PRK06753 PRK06753
hypothetical protein; Provisional
 10-72 1.55e-03

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 40.83  E-value: 1.55e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFPRyQIGESLL--PSTIHGVCRLsGAADDLAKAG 72
Cdd:PRK06753   3 IAIIGAGIGGLTAAALLQEQGHEVKVFEKNESVK-EVGAGIGigDNVIKKLGNH-DLAKGIKNAG 65
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
8-41 1.77e-03

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 40.49  E-value: 1.77e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 106709971   8 FDVAVVGGGPAGSTlAALVAK-QGHRVVVLEKENF 41
Cdd:COG0492    1 YDVVIIGAGPAGLT-AAIYAArAGLKTLVIEGGEP 34
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
6-176 1.94e-03

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 40.66  E-value: 1.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971   6 EEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEkenfPRYQIGE----SLLPSTIHGVCRLsGAADDLAKAGFPLKrggTF 81
Cdd:PRK07494   6 EHTDIAVIGGGPAGLAAAIALARAGASVALVA----PEPPYADlrttALLGPSIRFLERL-GLWARLAPHAAPLQ---SM 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 106709971  82 RW----GARPEPWTFAFSVSPrmAGPTSVAYQVERSKFDDILLKNARKQGADVREGCSVRGVIEEGERVHGLTyadADGn 157
Cdd:PRK07494  78 RIvdatGRLIRAPEVRFRAAE--IGEDAFGYNIPNWLLNRALEARVAELPNITRFGDEAESVRPREDEVTVTL---ADG- 151

                        170
                 ....*....|....*....
gi 106709971 158 eREIRARYVVDASGNKSRL 176
Cdd:PRK07494 152 -TTLSARLVVGADGRNSPV 169
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 8-39 2.01e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 40.35  E-value: 2.01e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 106709971   8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLEKE 39
Cdd:PRK08020   6 TDIAIVGGGMVGAALALGLAQHGFSVAVLEHA 37
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 8-40 2.62e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 39.99  E-value: 2.62e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 106709971    8 FDVAVVGGGPAGSTlAALVAKQ-GHRVVVLEKEN 40
Cdd:pfam07992   1 YDVVVIGGGPAGLA-AALTLAQlGGKVTLIEDEG 33
PRK13984 PRK13984
putative oxidoreductase; Provisional
 10-54 2.63e-03

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 40.52  E-value: 2.63e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP----RYQIGESLLPST 54
Cdd:PRK13984 286 VAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPggvmRYGIPSYRLPDE 334
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 10-46 2.96e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 40.24  E-value: 2.96e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEKENFP----RYQI 46
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLggmmRYGI 180
PRK12831 PRK12831
putative oxidoreductase; Provisional
 10-37 3.06e-03

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 40.00  E-value: 3.06e-03
                         10        20
                 ....*....|....*....|....*...
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLE 37
Cdd:PRK12831 143 VAVIGSGPAGLTCAGDLAKMGYDVTIFE 170
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 6-41 4.21e-03

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 39.76  E-value: 4.21e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 106709971   6 EEFDVAVVGGGPAGSTLAALVAKQGHRV-VVLEK-----------ENF 41
Cdd:PRK15317 210 DPYDVLVVGGGPAGAAAAIYAARKGIRTgIVAERfggqvldtmgiENF 257
PRK07208 PRK07208
hypothetical protein; Provisional
 9-40 4.88e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 39.49  E-value: 4.88e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 106709971   9 DVAVVGGGPAGSTLAALVAKQGHRVVVLEKEN 40
Cdd:PRK07208   6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADP 37
PRK08243 PRK08243
4-hydroxybenzoate 3-monooxygenase; Validated
 10-38 4.98e-03

4-hydroxybenzoate 3-monooxygenase; Validated


Pssm-ID: 236198 [Multi-domain]  Cd Length: 392  Bit Score: 39.40  E-value: 4.98e-03
                         10        20
                 ....*....|....*....|....*....
gi 106709971  10 VAVVGGGPAGSTLAALVAKQGHRVVVLEK 38
Cdd:PRK08243   5 VAIIGAGPAGLLLGQLLHLAGIDSVVLER 33
PRK06370 PRK06370
FAD-containing oxidoreductase;
5-41 5.15e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 39.42  E-value: 5.15e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 106709971   5 TEEFDVAVVGGGPAGSTLAALVAKQGHRVVVLEKENF 41
Cdd:PRK06370   3 AQRYDAIVIGAGQAGPPLAARAAGLGMKVALIERGLL 39
PLN02463 PLN02463
lycopene beta cyclase
 8-37 9.85e-03

lycopene beta cyclase


Pssm-ID: 178082 [Multi-domain]  Cd Length: 447  Bit Score: 38.54  E-value: 9.85e-03
                         10        20        30
                 ....*....|....*....|....*....|
gi 106709971   8 FDVAVVGGGPAGSTLAALVAKQGHRVVVLE 37
Cdd:PLN02463  29 VDLVVVGGGPAGLAVAQQVSEAGLSVCCID 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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