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Conserved domains on  [gi|67037830|gb|AAY63665|]
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granule-bound starch synthase, partial [Solanum thelopodium]

Protein Classification

glycogen/starch synthase( domain architecture ID 10133377)

glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, a key step of glycogen/starch biosynthesis

CAZY:  GT1
EC:  2.4.1.-
Gene Ontology:  GO:0004373
PubMed:  16037492|12691742
SCOP:  4002330

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
1-353 3.84e-130

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


:

Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 380.37  E-value: 3.84e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   1 DAWDTSVVV---EVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEKVWGKtgskiygPKTGQDYLDNEIRFSLLCQAALK 77
Cdd:cd03791  48 DELDGYLRVlglEVKVGGRGEEVGVFELPVDGVDYYFLDNPEFFDRPGLP-------GPPGYDYPDNAERFAFFSRAALE 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  78 APRVLNLKcskyfsgpygDDVlFIINDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYr 157
Cdd:cd03791 121 LLRRLGFQ----------PDI-IHANDWHTALVPAYLKTRYRGPG-FKKIKTVFTIHNLAYQGLFPLDTLAELGLPPEL- 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 158 gsfDFIDGYEKPvkgRKINWMKAGILESHRVVTVSPYYAQELVSAAdKGVELDNVLRKTS--ITGIVNGMDTQEWNPATD 235
Cdd:cd03791 188 ---FHIDGLEFY---GQINFLKAGIVYADRVTTVSPTYAKEILTPE-YGEGLDGVLRARAgkLSGILNGIDYDEWNPATD 260
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 236 KYTDVKYDiTTVMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQE 315
Cdd:cd03791 261 KLIPANYS-ANDLEGKAENKAALQKELGLPVDPDAPLFGFVGRLTEQKGVDLILDALPELLEEGGQLVVLGSGDPEYEQA 339
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 67037830 316 IEQLEVLYPNKAKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:cd03791 340 FRELAERYPGKVAVVIGFDEALAHRIYAGADFFLMPSR 377
 
Name Accession Description Interval E-value
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
1-353 3.84e-130

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 380.37  E-value: 3.84e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   1 DAWDTSVVV---EVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEKVWGKtgskiygPKTGQDYLDNEIRFSLLCQAALK 77
Cdd:cd03791  48 DELDGYLRVlglEVKVGGRGEEVGVFELPVDGVDYYFLDNPEFFDRPGLP-------GPPGYDYPDNAERFAFFSRAALE 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  78 APRVLNLKcskyfsgpygDDVlFIINDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYr 157
Cdd:cd03791 121 LLRRLGFQ----------PDI-IHANDWHTALVPAYLKTRYRGPG-FKKIKTVFTIHNLAYQGLFPLDTLAELGLPPEL- 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 158 gsfDFIDGYEKPvkgRKINWMKAGILESHRVVTVSPYYAQELVSAAdKGVELDNVLRKTS--ITGIVNGMDTQEWNPATD 235
Cdd:cd03791 188 ---FHIDGLEFY---GQINFLKAGIVYADRVTTVSPTYAKEILTPE-YGEGLDGVLRARAgkLSGILNGIDYDEWNPATD 260
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 236 KYTDVKYDiTTVMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQE 315
Cdd:cd03791 261 KLIPANYS-ANDLEGKAENKAALQKELGLPVDPDAPLFGFVGRLTEQKGVDLILDALPELLEEGGQLVVLGSGDPEYEQA 339
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 67037830 316 IEQLEVLYPNKAKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:cd03791 340 FRELAERYPGKVAVVIGFDEALAHRIYAGADFFLMPSR 377
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
4-353 4.81e-115

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 341.94  E-value: 4.81e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830     4 DTSVVVEVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEKvwgktGSKIYGPktgqDYLDNEIRFSLLCQAALKAPRVLN 83
Cdd:TIGR02095  56 KVVELVDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDR-----PGGIYGD----DYPDNAERFAFFSRAAAELLSGLG 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    84 lkcskyfsgpYGDDVlFIINDWHTALIPCYLKSMYQSrgiyVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYRGSFDFI 163
Cdd:TIGR02095 127 ----------WQPDV-VHAHDWHTALVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLE 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   164 DGyekpvkgRKINWMKAGILESHRVVTVSPYYAQELVSAaDKGVELDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVK 241
Cdd:TIGR02095 192 FY-------GRVNFLKGGIVYADRVTTVSPTYAREILTP-EFGYGLDGVLKARSgkLRGILNGIDTEVWNPATDPYLKAN 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   242 YDITTvMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEV 321
Cdd:TIGR02095 264 YSADD-LAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAE 342
                         330       340       350
                  ....*....|....*....|....*....|..
gi 67037830   322 LYPNKAKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:TIGR02095 343 RYPGNVRVIIGYDEALAHLIYAGADFILMPSR 374
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
9-353 1.93e-104

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 314.72  E-value: 1.93e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   9 VEVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEkvwgktGSKIYGPkTGQDYLDNEIRFSLLCQAALKAPRVLNLKCsk 88
Cdd:COG0297  60 LEVPLGGRTYYARVLEGPDDGVPVYFIDNPELFD------RPGPYGD-PDRDYPDNAERFAFFSRAALELLKGLDWKP-- 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  89 yfsgpygdDVLFIiNDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYrgsfDFIDGYEK 168
Cdd:COG0297 131 --------DIIHC-HDWQTGLIPALLKTRYADDP-FKRIKTVFTIHNLAYQGIFPAEILELLGLPPEL----FTPDGLEF 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 169 PvkGrKINWMKAGILESHRVVTVSPYYAQELVSAAdKGVELDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVKYDITT 246
Cdd:COG0297 197 Y--G-QINFLKAGIVYADRVTTVSPTYAREIQTPE-FGEGLDGLLRARSgkLSGILNGIDYDVWNPATDPYLPANYSADD 272
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 247 vMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNK 326
Cdd:COG0297 273 -LEGKAANKAALQEELGLPVDPDAPLIGMVSRLTEQKGLDLLLEALDELLEEDVQLVVLGSGDPEYEEAFRELAARYPGR 351
                       330       340
                ....*....|....*....|....*..
gi 67037830 327 AKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:COG0297 352 VAVYIGYDEALAHRIYAGADFFLMPSR 378
glgA PRK00654
glycogen synthase GlgA;
19-353 6.49e-89

glycogen synthase GlgA;


Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 274.69  E-value: 6.49e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   19 SVRFFHCYKRGVDRVFVDHPMFlekvwgktgskiYGPKTGQDYLDNEIRFSLLCQAALKAPRVLNLKcskyfsgPygdDV 98
Cdd:PRK00654  64 TVLFGHLEGDGVPVYLIDAPHL------------FDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPR-------P---DI 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   99 LFIiNDWHTALIPCYLKSMYQSRgiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYrgsFDfIDGYEKPvkgRKINWM 178
Cdd:PRK00654 122 VHA-HDWHTGLIPALLKEKYWRG--YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEA---FH-LEGLEFY---GQISFL 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  179 KAGILESHRVVTVSPYYAQELVSAADkGVELDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVKYDITTvMDAKPLLKE 256
Cdd:PRK00654 192 KAGLYYADRVTTVSPTYAREITTPEF-GYGLEGLLRARSgkLSGILNGIDYDIWNPETDPLLAANYSADD-LEGKAENKR 269
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  257 ALQAAAGLPVDrKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNKAKGVAKFNAP 336
Cdd:PRK00654 270 ALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEA 348
                        330
                 ....*....|....*..
gi 67037830  337 LAHMIIAGADFMLIPSR 353
Cdd:PRK00654 349 LAHRIYAGADMFLMPSR 365
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
13-215 2.39e-54

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 178.29  E-value: 2.39e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    13 VGDRIESVRFFHCYKRGVDRVFVDHPMFLEKvwgktgSKIYGPKtGQDYLDNEIRFSLLCQAALKAPRVLNlkcskyfsg 92
Cdd:pfam08323  64 VPVRPLTVGVARLELDGVDVYFLDNPDYFDR------PGLYGDD-GRDYEDNAERFAFFSRAALELAKKLG--------- 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    93 pYGDDVLfIINDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYRGsfdfIDGYEKPvkg 172
Cdd:pfam08323 128 -WIPDII-HCHDWHTALVPAYLKEAYADDP-FKNIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFN----LDGLEFY--- 197
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 67037830   173 RKINWMKAGILESHRVVTVSPYYAQELVSAADkGVELDNVLRK 215
Cdd:pfam08323 198 GQINFLKAGIVYADAVTTVSPTYAEEIQTPEF-GGGLDGLLRE 239
 
Name Accession Description Interval E-value
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
1-353 3.84e-130

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 380.37  E-value: 3.84e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   1 DAWDTSVVV---EVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEKVWGKtgskiygPKTGQDYLDNEIRFSLLCQAALK 77
Cdd:cd03791  48 DELDGYLRVlglEVKVGGRGEEVGVFELPVDGVDYYFLDNPEFFDRPGLP-------GPPGYDYPDNAERFAFFSRAALE 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  78 APRVLNLKcskyfsgpygDDVlFIINDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYr 157
Cdd:cd03791 121 LLRRLGFQ----------PDI-IHANDWHTALVPAYLKTRYRGPG-FKKIKTVFTIHNLAYQGLFPLDTLAELGLPPEL- 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 158 gsfDFIDGYEKPvkgRKINWMKAGILESHRVVTVSPYYAQELVSAAdKGVELDNVLRKTS--ITGIVNGMDTQEWNPATD 235
Cdd:cd03791 188 ---FHIDGLEFY---GQINFLKAGIVYADRVTTVSPTYAKEILTPE-YGEGLDGVLRARAgkLSGILNGIDYDEWNPATD 260
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 236 KYTDVKYDiTTVMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQE 315
Cdd:cd03791 261 KLIPANYS-ANDLEGKAENKAALQKELGLPVDPDAPLFGFVGRLTEQKGVDLILDALPELLEEGGQLVVLGSGDPEYEQA 339
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 67037830 316 IEQLEVLYPNKAKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:cd03791 340 FRELAERYPGKVAVVIGFDEALAHRIYAGADFFLMPSR 377
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
4-353 4.81e-115

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 341.94  E-value: 4.81e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830     4 DTSVVVEVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEKvwgktGSKIYGPktgqDYLDNEIRFSLLCQAALKAPRVLN 83
Cdd:TIGR02095  56 KVVELVDLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDR-----PGGIYGD----DYPDNAERFAFFSRAAAELLSGLG 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    84 lkcskyfsgpYGDDVlFIINDWHTALIPCYLKSMYQSrgiyVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYRGSFDFI 163
Cdd:TIGR02095 127 ----------WQPDV-VHAHDWHTALVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLE 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   164 DGyekpvkgRKINWMKAGILESHRVVTVSPYYAQELVSAaDKGVELDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVK 241
Cdd:TIGR02095 192 FY-------GRVNFLKGGIVYADRVTTVSPTYAREILTP-EFGYGLDGVLKARSgkLRGILNGIDTEVWNPATDPYLKAN 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   242 YDITTvMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEV 321
Cdd:TIGR02095 264 YSADD-LAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAE 342
                         330       340       350
                  ....*....|....*....|....*....|..
gi 67037830   322 LYPNKAKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:TIGR02095 343 RYPGNVRVIIGYDEALAHLIYAGADFILMPSR 374
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
9-353 1.93e-104

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 314.72  E-value: 1.93e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   9 VEVKVGDRIESVRFFHCYKRGVDRVFVDHPMFLEkvwgktGSKIYGPkTGQDYLDNEIRFSLLCQAALKAPRVLNLKCsk 88
Cdd:COG0297  60 LEVPLGGRTYYARVLEGPDDGVPVYFIDNPELFD------RPGPYGD-PDRDYPDNAERFAFFSRAALELLKGLDWKP-- 130
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  89 yfsgpygdDVLFIiNDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYrgsfDFIDGYEK 168
Cdd:COG0297 131 --------DIIHC-HDWQTGLIPALLKTRYADDP-FKRIKTVFTIHNLAYQGIFPAEILELLGLPPEL----FTPDGLEF 196
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 169 PvkGrKINWMKAGILESHRVVTVSPYYAQELVSAAdKGVELDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVKYDITT 246
Cdd:COG0297 197 Y--G-QINFLKAGIVYADRVTTVSPTYAREIQTPE-FGEGLDGLLRARSgkLSGILNGIDYDVWNPATDPYLPANYSADD 272
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 247 vMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNK 326
Cdd:COG0297 273 -LEGKAANKAALQEELGLPVDPDAPLIGMVSRLTEQKGLDLLLEALDELLEEDVQLVVLGSGDPEYEEAFRELAARYPGR 351
                       330       340
                ....*....|....*....|....*..
gi 67037830 327 AKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:COG0297 352 VAVYIGYDEALAHRIYAGADFFLMPSR 378
glgA PRK00654
glycogen synthase GlgA;
19-353 6.49e-89

glycogen synthase GlgA;


Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 274.69  E-value: 6.49e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   19 SVRFFHCYKRGVDRVFVDHPMFlekvwgktgskiYGPKTGQDYLDNEIRFSLLCQAALKAPRVLNLKcskyfsgPygdDV 98
Cdd:PRK00654  64 TVLFGHLEGDGVPVYLIDAPHL------------FDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPR-------P---DI 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   99 LFIiNDWHTALIPCYLKSMYQSRgiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYrgsFDfIDGYEKPvkgRKINWM 178
Cdd:PRK00654 122 VHA-HDWHTGLIPALLKEKYWRG--YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEA---FH-LEGLEFY---GQISFL 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  179 KAGILESHRVVTVSPYYAQELVSAADkGVELDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVKYDITTvMDAKPLLKE 256
Cdd:PRK00654 192 KAGLYYADRVTTVSPTYAREITTPEF-GYGLEGLLRARSgkLSGILNGIDYDIWNPETDPLLAANYSADD-LEGKAENKR 269
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  257 ALQAAAGLPVDrKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNKAKGVAKFNAP 336
Cdd:PRK00654 270 ALQERFGLPDD-DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEA 348
                        330
                 ....*....|....*..
gi 67037830  337 LAHMIIAGADFMLIPSR 353
Cdd:PRK00654 349 LAHRIYAGADMFLMPSR 365
PRK14099 PRK14099
glycogen synthase GlgA;
49-353 3.20e-57

glycogen synthase GlgA;


Pssm-ID: 237610 [Multi-domain]  Cd Length: 485  Bit Score: 193.01  E-value: 3.20e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   49 GSKIYGPKtGQDYLDNEIRFSLLCQAALKAPRVLnlkcskyfSGPYGDDVLFIiNDWHTALIPCYLKsmYQSRGiyvNAK 128
Cdd:PRK14099  96 GNPYVGPD-GKDWPDNAQRFAALARAAAAIGQGL--------VPGFVPDIVHA-HDWQAGLAPAYLH--YSGRP---APG 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  129 VAFCIHNIAYQGRFAFSDFPLLNLPDEyrgSFDfIDGYEkpVKGrKINWMKAGILESHRVVTVSPYYAQElVSAADKGVE 208
Cdd:PRK14099 161 TVFTIHNLAFQGQFPRELLGALGLPPS---AFS-LDGVE--YYG-GIGYLKAGLQLADRITTVSPTYALE-IQGPEAGMG 232
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  209 LDNVLRKTS--ITGIVNGMDTQEWNPATDKYTDVKYDITTvMDAKPLLKEALQAAAGLPVDRKIPLIGFIGRLEEQKGSD 286
Cdd:PRK14099 233 LDGLLRQRAdrLSGILNGIDTAVWNPATDELIAATYDVET-LAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLD 311
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 67037830  287 ILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNKAKGVAKFNAPLAHMIIAGADFMLIPSR 353
Cdd:PRK14099 312 LLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSR 378
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
13-215 2.39e-54

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 178.29  E-value: 2.39e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    13 VGDRIESVRFFHCYKRGVDRVFVDHPMFLEKvwgktgSKIYGPKtGQDYLDNEIRFSLLCQAALKAPRVLNlkcskyfsg 92
Cdd:pfam08323  64 VPVRPLTVGVARLELDGVDVYFLDNPDYFDR------PGLYGDD-GRDYEDNAERFAFFSRAALELAKKLG--------- 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    93 pYGDDVLfIINDWHTALIPCYLKSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPLLNLPDEYRGsfdfIDGYEKPvkg 172
Cdd:pfam08323 128 -WIPDII-HCHDWHTALVPAYLKEAYADDP-FKNIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFN----LDGLEFY--- 197
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 67037830   173 RKINWMKAGILESHRVVTVSPYYAQELVSAADkGVELDNVLRK 215
Cdd:pfam08323 198 GQINFLKAGIVYADAVTTVSPTYAEEIQTPEF-GGGLDGLLRE 239
PRK14098 PRK14098
starch synthase;
103-353 9.90e-53

starch synthase;


Pssm-ID: 172588 [Multi-domain]  Cd Length: 489  Bit Score: 181.47  E-value: 9.90e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  103 NDWHTALIPCYLKSMYQSRGIYVNAKVAFCIHNIAYQGRFAFSDFPLLnLPDEyrgsfdFIDGYEkpVKGRKINWMKAGI 182
Cdd:PRK14098 148 HDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEE------VCSGLH--REGDEVNMLYTGV 218
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  183 LESHRVVTVSPYYAQELVSAADKGVELDNVL--RKTSITGIVNGMDTQEWNPATDKYTDVKYDITTvMDAKPLLKEALQA 260
Cdd:PRK14098 219 EHADLLTTTSPRYAEEIAGDGEEAFGLDKVLeeRKMRLHGILNGIDTRQWNPSTDKLIKKRYSIER-LDGKLENKKALLE 297
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  261 AAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNKAKGVAKFNAPLAHM 340
Cdd:PRK14098 298 EVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHL 377
                        250
                 ....*....|...
gi 67037830  341 IIAGADFMLIPSR 353
Cdd:PRK14098 378 AIAGLDMLLMPGK 390
PLN02939 PLN02939
transferase, transferring glycosyl groups
34-352 1.49e-32

transferase, transferring glycosyl groups


Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 128.87  E-value: 1.49e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   34 FVDHPMFLEKVWGKT--GSKIY--GPK-------TGQDY--LDNEIRFSLLCQAALKAprvlnlkcsKYFSGPYGDdvlf 100
Cdd:PLN02939 546 YFDGNLFKNKIWTGTveGLPVYfiEPQhpskffwRAQYYgeHDDFKRFSYFSRAALEL---------LYQSGKKPD---- 612
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  101 IIN--DWHTALI-PCYLkSMYQSRGiYVNAKVAFCIHNIAYQGRFAFSDFPL-------LNLPDEYRGSfdfidgyekpv 170
Cdd:PLN02939 613 IIHchDWQTAFVaPLYW-DLYAPKG-FNSARICFTCHNFEYQGTAPASDLAScgldvhqLDRPDRMQDN----------- 679
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  171 KGRKINWMKAGILESHRVVTVSPYYAQELVSAADKGVELDNVLRKTSITGIVNGMDTQEWNPATDKYTDVKYDITTvMDA 250
Cdd:PLN02939 680 AHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNAND-LQG 758
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830  251 KPLLKEALQAAAGLP-VDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTG-----KKKFEQEIEQLEvlYP 324
Cdd:PLN02939 759 KAANKAALRKQLGLSsADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSpvphiQREFEGIADQFQ--SN 836
                        330       340
                 ....*....|....*....|....*...
gi 67037830  325 NKAKGVAKFNAPLAHMIIAGADFMLIPS 352
Cdd:PLN02939 837 NNIRLILKYDEALSHSIYAASDMFIIPS 864
PLN02316 PLN02316
synthase/transferase
52-352 2.26e-25

synthase/transferase


Pssm-ID: 215180 [Multi-domain]  Cd Length: 1036  Bit Score: 107.65  E-value: 2.26e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830    52 IYGPKtgqdylDNEIRFSLLCQAALKAPRVlnlkcskyfSGPYGDdvlfIIN--DWHTALIPCYLKSMYQSRGIyVNAKV 129
Cdd:PLN02316  682 VYGCR------NDGERFGFFCHAALEFLLQ---------SGFHPD----IIHchDWSSAPVAWLFKDHYAHYGL-SKARV 741
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   130 AFCIHNIAYqgrfafsdfpllnlpdeyrgsfdfidgyekpvkgrKINWMKAGILESHRVVTVSPYYAQELVSAADKGVEL 209
Cdd:PLN02316  742 VFTIHNLEF-----------------------------------GANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHL 786
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   210 dnvlrkTSITGIVNGMDTQEWNPATDKYTDVKYDITTVMDAKPLLKEALQAAAGL-PVDrkIPLIGFIGRLEEQKGSDIL 288
Cdd:PLN02316  787 ------YKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLkQAD--LPLVGIITRLTHQKGIHLI 858
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 67037830   289 VAAIHKFIGLDVQIVVLGTG-----KKKFEQEIEQLEVLYPNKAKGVAKFNAPLAHMIIAGADFMLIPS 352
Cdd:PLN02316  859 KHAIWRTLERNGQVVLLGSApdpriQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPS 927
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
158-353 1.47e-08

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 55.62  E-value: 1.47e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 158 GSFDFIDGYEKPVKGRKINWMKAGILESHRVVTVSPYYAQELVSAadkgveldNVLRKTSITGIVNGMDTQEWNPATdky 237
Cdd:cd03801 114 GAEPGRLLLLLAAERRLLARAEALLRRADAVIAVSEALRDELRAL--------GGIPPEKIVVIPNGVDLERFSPPL--- 182
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 238 tdvkydittvmdakpllkealqaAAGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFI--GLDVQIVVLGTGkkkfEQE 315
Cdd:cd03801 183 -----------------------RRKLGIPPDRPVLLFVGRLSPRKGVDLLLEALAKLLrrGPDVRLVIVGGD----GPL 235
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 67037830 316 IEQLEVLYPNKAKGVaKF----NAPLAHMIIAGADFMLIPSR 353
Cdd:cd03801 236 RAELEELELGLGDRV-RFlgfvPDEELPALYAAADVFVLPSR 276
GT4_WlbH-like cd03798
Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the ...
187-353 4.63e-04

Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.


Pssm-ID: 340828 [Multi-domain]  Cd Length: 376  Bit Score: 41.60  E-value: 4.63e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 187 RVVTVSPYYAQELVSAadkGVELDNVlrktsiTGIVNGMDTQEWNPATdkytdvkydittvmdakpllkealqAAAGLPV 266
Cdd:cd03798 153 RVIAVSKALAEELVAL---GVPRDRV------DVIPNGVDPARFQPED-------------------------RGLGLPL 198
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 267 DRkiPLIGFIGRLEEQKGSDILVAAIHKFI--GLDVQIVVLGTG--KKKFEQEIEQLevlypNKAKGVaKFNAPLAHMII 342
Cdd:cd03798 199 DA--FVILFVGRLIPRKGIDLLLEAFARLAkaRPDVVLLIVGDGplREALRALAEDL-----GLGDRV-TFTGRLPHEQV 270
                       170
                ....*....|....*
gi 67037830 343 AG----ADFMLIPSR 353
Cdd:cd03798 271 PAyyraCDVFVLPSR 285
GT4_ExpE7-like cd03823
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ...
273-353 6.61e-04

glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).


Pssm-ID: 340850 [Multi-domain]  Cd Length: 357  Bit Score: 41.16  E-value: 6.61e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 273 IGFIGRLEEQKGSDILVAAIHKFIGLDVQIVVLGTGKkkfEQEIEQLEVLYPNKAKGVAKFNAPLAHMiiAGADFMLIPS 352
Cdd:cd03823 194 FGYIGRLTEEKGIDLLVEAFKRLPREDIELVIAGHGP---LSDERQIEGGRRIAFLGRVPTDDIKDFY--EKIDVLVVPS 268

                .
gi 67037830 353 R 353
Cdd:cd03823 269 I 269
GT4_GT28_WabH-like cd03811
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most ...
267-353 7.92e-04

family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.


Pssm-ID: 340839 [Multi-domain]  Cd Length: 351  Bit Score: 40.80  E-value: 7.92e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 267 DRKIPLIGFIGRLEEQKGSDILVAAIHKFI--GLDVQIVVLGTG--KKKFEQEIEQL----EVLYPNKAKGVAKFnapla 338
Cdd:cd03811 185 PEDGPVILAVGRLDPQKGHDLLIEAFAKLRkkYPDVKLVILGDGplREELEKLAKELglaeRVIFLGFQSNPYPY----- 259
                        90
                ....*....|....*
gi 67037830 339 hmiIAGADFMLIPSR 353
Cdd:cd03811 260 ---LKKADLFVLSSR 271
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
271-353 9.40e-04

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 39.03  E-value: 9.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830   271 PLIGFIGRL-EEQKGSDILVAAIHKFI--GLDVQIVVLGTGkkkfeqEIEQLEVLYPNKAKGVaKFNAPLAHM--IIAGA 345
Cdd:pfam13692   2 PVILFVGRLhPNVKGVDYLLEAVPLLRkrDNDVRLVIVGDG------PEEELEELAAGLEDRV-IFTGFVEDLaeLLAAA 74

                  ....*...
gi 67037830   346 DFMLIPSR 353
Cdd:pfam13692  75 DVFVLPSL 82
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
275-353 4.95e-03

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 38.15  E-value: 4.95e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 275 FIGRLEEQKGSDILVAAIHK----FIGLDVQIVVLGTGKKKFEQEIEQLEVLYPNKAKGvAKFNAPLAHMIIAGADFMLI 350
Cdd:cd01635 115 SVGRLVPEKGIDLLLEALALlkarLPDLVLVLVGGGGEREEEEALAAALGLLERVVIIG-GLVDDEVLELLLAAADVFVL 193

                ...
gi 67037830 351 PSR 353
Cdd:cd01635 194 PSR 196
GT4_WcaC-like cd03825
putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family ...
173-353 5.63e-03

putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.


Pssm-ID: 340851 [Multi-domain]  Cd Length: 364  Bit Score: 38.47  E-value: 5.63e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 173 RKINWMKAGILEshrVVTVSPYYAQELVSAAdkgveldnVLRKTSITGIVNGMDTQEWNPAtDKytdvkydittvMDAKP 252
Cdd:cd03825 129 RKREALAKKRLT---IVAPSRWLADMVRRSP--------LLKGLPVVVIPNGIDTEIFAPV-DK-----------AKARK 185
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 253 LLkealqaaaGLPVDRKIPLIGFIGRLEEQKGSDILVAAIHKFIGLD-VQIVVLG-TGKKKFEQEIEQLEVLYPNkakgv 330
Cdd:cd03825 186 RL--------GIPQDKKVILFGAESVTKPRKGFDELIEALKLLATKDdLLLVVFGkNDPQIVILPFDIISLGYID----- 252
                       170       180
                ....*....|....*....|...
gi 67037830 331 akfNAPLAHMIIAGADFMLIPSR 353
Cdd:cd03825 253 ---DDEQLVDIYSAADLFVHPSL 272
GT4_CapH-like cd03812
capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins; This ...
272-352 6.21e-03

capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).


Pssm-ID: 340840 [Multi-domain]  Cd Length: 357  Bit Score: 38.04  E-value: 6.21e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 272 LIGFIGRLEEQKGSDILVAAIHKFI--GLDVQIVVLGTG--KKKFEQEIEQLE----VLYPNKAKGVAKFnapLAHMiia 343
Cdd:cd03812 193 VLGHVGRFNEQKNHSFLIDIFEELKkkNPNVKLVLVGEGelKEKIKEKVKELGledkVIFLGFRNDVSEI---LSAM--- 266

                ....*....
gi 67037830 344 gaDFMLIPS 352
Cdd:cd03812 267 --DVFLFPS 273
GT4_sucrose_synthase cd03800
sucrose-phosphate synthase and similar proteins; This family is most closely related to the ...
184-323 6.51e-03

sucrose-phosphate synthase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.


Pssm-ID: 340830 [Multi-domain]  Cd Length: 398  Bit Score: 37.99  E-value: 6.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 67037830 184 ESHRVVTVSPYYAQEL---VSAADKGVELdnvlrktsitgIVNGMDTQEWNPATDKytdvkydittvmdakpllkEALQA 260
Cdd:cd03800 163 AADRVIASTPQEADELislYGADPSRINV-----------VPPGVDLERFFPVDRA-------------------EARRA 212
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 67037830 261 AAGLPVDRKIPLigFIGRLEEQKGSDILVAAIHKFIGLDVQ---IVVLGT---GKKKFEQEIEQLEVLY 323
Cdd:cd03800 213 RLLLPPDKPVVL--ALGRLDPRKGIDTLVRAFAQLPELRELanlVLVGGPsddPLSMDREELAELAEEL 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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