BV80 merozoite protein, partial [Babesia bovis]
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
DUF1411 | pfam07199 | Protein of unknown function (DUF1411); This family represents a conserved region approximately ... |
1-182 | 2.30e-96 | ||||
Protein of unknown function (DUF1411); This family represents a conserved region approximately 150 residues long that is sometimes repeated within some Babesia bovis proteins of unknown function. : Pssm-ID: 369258 Cd Length: 188 Bit Score: 288.32 E-value: 2.30e-96
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kgd super family | cl39092 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
321-401 | 8.82e-11 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; The actual alignment was detected with superfamily member PRK12270: Pssm-ID: 476867 [Multi-domain] Cd Length: 1228 Bit Score: 64.53 E-value: 8.82e-11
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PRK12323 super family | cl46901 | DNA polymerase III subunit gamma/tau; |
226-421 | 5.17e-08 | ||||
DNA polymerase III subunit gamma/tau; The actual alignment was detected with superfamily member PRK12323: Pssm-ID: 481241 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 5.17e-08
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DUF1411 super family | cl06297 | Protein of unknown function (DUF1411); This family represents a conserved region approximately ... |
398-471 | 7.24e-07 | ||||
Protein of unknown function (DUF1411); This family represents a conserved region approximately 150 residues long that is sometimes repeated within some Babesia bovis proteins of unknown function. The actual alignment was detected with superfamily member pfam07199: Pssm-ID: 369258 Cd Length: 188 Bit Score: 49.49 E-value: 7.24e-07
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Name | Accession | Description | Interval | E-value | ||||
DUF1411 | pfam07199 | Protein of unknown function (DUF1411); This family represents a conserved region approximately ... |
1-182 | 2.30e-96 | ||||
Protein of unknown function (DUF1411); This family represents a conserved region approximately 150 residues long that is sometimes repeated within some Babesia bovis proteins of unknown function. Pssm-ID: 369258 Cd Length: 188 Bit Score: 288.32 E-value: 2.30e-96
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
321-401 | 8.82e-11 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 64.53 E-value: 8.82e-11
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PspC_subgroup_1 | NF033838 | pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
317-402 | 9.49e-09 | ||||
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 57.72 E-value: 9.49e-09
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PRK12323 | PRK12323 | DNA polymerase III subunit gamma/tau; |
226-421 | 5.17e-08 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 5.17e-08
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PspC_subgroup_1 | NF033838 | pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
339-411 | 2.53e-07 | ||||
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 53.09 E-value: 2.53e-07
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DUF1411 | pfam07199 | Protein of unknown function (DUF1411); This family represents a conserved region approximately ... |
398-471 | 7.24e-07 | ||||
Protein of unknown function (DUF1411); This family represents a conserved region approximately 150 residues long that is sometimes repeated within some Babesia bovis proteins of unknown function. Pssm-ID: 369258 Cd Length: 188 Bit Score: 49.49 E-value: 7.24e-07
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COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
319-379 | 6.04e-05 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 45.76 E-value: 6.04e-05
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SepH | NF040712 | septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
318-420 | 1.82e-04 | ||||
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments. Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 1.82e-04
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rad23 | TIGR00601 | UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
337-407 | 3.57e-04 | ||||
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 3.57e-04
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SAV_2336_NTERM | NF041121 | SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
335-414 | 1.27e-03 | ||||
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems. Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.14 E-value: 1.27e-03
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Rib_recp_KP_reg | pfam05104 | Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
318-395 | 2.38e-03 | ||||
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear. Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 38.18 E-value: 2.38e-03
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SAV_2336_NTERM | NF041121 | SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
317-400 | 5.24e-03 | ||||
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems. Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.22 E-value: 5.24e-03
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SepH | NF040712 | septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
232-373 | 9.80e-03 | ||||
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments. Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 38.21 E-value: 9.80e-03
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Name | Accession | Description | Interval | E-value | ||||
DUF1411 | pfam07199 | Protein of unknown function (DUF1411); This family represents a conserved region approximately ... |
1-182 | 2.30e-96 | ||||
Protein of unknown function (DUF1411); This family represents a conserved region approximately 150 residues long that is sometimes repeated within some Babesia bovis proteins of unknown function. Pssm-ID: 369258 Cd Length: 188 Bit Score: 288.32 E-value: 2.30e-96
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
321-401 | 8.82e-11 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 64.53 E-value: 8.82e-11
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
317-397 | 4.43e-10 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 62.22 E-value: 4.43e-10
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
318-414 | 1.78e-09 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.00 E-value: 1.78e-09
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
330-408 | 1.87e-09 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 60.29 E-value: 1.87e-09
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
318-414 | 4.29e-09 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 58.84 E-value: 4.29e-09
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
334-411 | 6.55e-09 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 58.36 E-value: 6.55e-09
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PspC_subgroup_1 | NF033838 | pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
317-402 | 9.49e-09 | ||||
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 57.72 E-value: 9.49e-09
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PRK11633 | PRK11633 | cell division protein DedD; Provisional |
317-399 | 1.54e-08 | ||||
cell division protein DedD; Provisional Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 55.01 E-value: 1.54e-08
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
345-427 | 1.85e-08 | ||||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.21 E-value: 1.85e-08
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PRK11633 | PRK11633 | cell division protein DedD; Provisional |
320-403 | 1.96e-08 | ||||
cell division protein DedD; Provisional Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 54.62 E-value: 1.96e-08
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PRK14951 | PRK14951 | DNA polymerase III subunits gamma and tau; Provisional |
318-456 | 2.94e-08 | ||||
DNA polymerase III subunits gamma and tau; Provisional Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 56.26 E-value: 2.94e-08
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PRK11633 | PRK11633 | cell division protein DedD; Provisional |
322-407 | 2.95e-08 | ||||
cell division protein DedD; Provisional Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 54.24 E-value: 2.95e-08
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PRK12323 | PRK12323 | DNA polymerase III subunit gamma/tau; |
226-421 | 5.17e-08 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 5.17e-08
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
323-437 | 9.33e-08 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.61 E-value: 9.33e-08
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
322-414 | 1.71e-07 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 53.84 E-value: 1.71e-07
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PspC_subgroup_1 | NF033838 | pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
339-411 | 2.53e-07 | ||||
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 53.09 E-value: 2.53e-07
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PRK10905 | PRK10905 | cell division protein DamX; Validated |
318-429 | 5.24e-07 | ||||
cell division protein DamX; Validated Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 51.48 E-value: 5.24e-07
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PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
319-414 | 6.34e-07 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.16 E-value: 6.34e-07
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DUF1411 | pfam07199 | Protein of unknown function (DUF1411); This family represents a conserved region approximately ... |
398-471 | 7.24e-07 | ||||
Protein of unknown function (DUF1411); This family represents a conserved region approximately 150 residues long that is sometimes repeated within some Babesia bovis proteins of unknown function. Pssm-ID: 369258 Cd Length: 188 Bit Score: 49.49 E-value: 7.24e-07
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
318-409 | 7.91e-07 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.53 E-value: 7.91e-07
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PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
318-413 | 8.50e-07 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 51.77 E-value: 8.50e-07
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tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
317-411 | 1.83e-06 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 49.80 E-value: 1.83e-06
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PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
317-389 | 2.22e-06 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 49.68 E-value: 2.22e-06
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PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
326-390 | 2.22e-06 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 49.68 E-value: 2.22e-06
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PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
318-414 | 2.40e-06 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 50.32 E-value: 2.40e-06
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PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
345-413 | 3.21e-06 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 49.30 E-value: 3.21e-06
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PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
318-414 | 4.03e-06 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.46 E-value: 4.03e-06
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PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
317-410 | 4.09e-06 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 49.34 E-value: 4.09e-06
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PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
338-413 | 4.73e-06 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 48.91 E-value: 4.73e-06
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PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
326-412 | 6.54e-06 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 48.57 E-value: 6.54e-06
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PRK13108 | PRK13108 | prolipoprotein diacylglyceryl transferase; Reviewed |
319-452 | 8.21e-06 | ||||
prolipoprotein diacylglyceryl transferase; Reviewed Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 48.05 E-value: 8.21e-06
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
322-412 | 8.60e-06 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 8.60e-06
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tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
319-411 | 8.62e-06 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 47.88 E-value: 8.62e-06
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PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
318-412 | 9.72e-06 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 9.72e-06
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tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
319-413 | 1.00e-05 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 47.49 E-value: 1.00e-05
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tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
319-411 | 1.01e-05 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 47.49 E-value: 1.01e-05
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PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
341-413 | 1.04e-05 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 47.75 E-value: 1.04e-05
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PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
325-418 | 1.12e-05 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.40 E-value: 1.12e-05
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PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
317-414 | 1.39e-05 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.54 E-value: 1.39e-05
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PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
326-456 | 2.48e-05 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.24 E-value: 2.48e-05
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motB | PRK05996 | MotB family protein; |
319-430 | 3.45e-05 | ||||
MotB family protein; Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 45.84 E-value: 3.45e-05
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tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
323-409 | 3.87e-05 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 45.95 E-value: 3.87e-05
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PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
317-441 | 4.07e-05 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.13 E-value: 4.07e-05
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PRK08691 | PRK08691 | DNA polymerase III subunits gamma and tau; Validated |
319-411 | 4.30e-05 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 46.24 E-value: 4.30e-05
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PRK13808 | PRK13808 | adenylate kinase; Provisional |
317-424 | 4.46e-05 | ||||
adenylate kinase; Provisional Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 45.26 E-value: 4.46e-05
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PHA03378 | PHA03378 | EBNA-3B; Provisional |
323-413 | 4.68e-05 | ||||
EBNA-3B; Provisional Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 46.21 E-value: 4.68e-05
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tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
319-411 | 5.00e-05 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 45.57 E-value: 5.00e-05
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COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
319-379 | 6.04e-05 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 45.76 E-value: 6.04e-05
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PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
358-414 | 6.11e-05 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 45.06 E-value: 6.11e-05
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PRK07994 | PRK07994 | DNA polymerase III subunits gamma and tau; Validated |
317-439 | 6.22e-05 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 6.22e-05
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PRK13042 | PRK13042 | superantigen-like protein SSL4; Reviewed; |
319-389 | 6.92e-05 | ||||
superantigen-like protein SSL4; Reviewed; Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 44.62 E-value: 6.92e-05
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PRK13808 | PRK13808 | adenylate kinase; Provisional |
328-421 | 9.05e-05 | ||||
adenylate kinase; Provisional Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 44.49 E-value: 9.05e-05
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PRK07994 | PRK07994 | DNA polymerase III subunits gamma and tau; Validated |
318-411 | 9.59e-05 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 44.86 E-value: 9.59e-05
|
||||||||
tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
317-407 | 1.04e-04 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 44.41 E-value: 1.04e-04
|
||||||||
PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
317-414 | 1.11e-04 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 1.11e-04
|
||||||||
DedD | COG3147 | Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
326-393 | 1.16e-04 | ||||
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 42.07 E-value: 1.16e-04
|
||||||||
PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
318-414 | 1.22e-04 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 1.22e-04
|
||||||||
DamX | COG3266 | Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
323-409 | 1.27e-04 | ||||
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 44.46 E-value: 1.27e-04
|
||||||||
PRK12373 | PRK12373 | NADH-quinone oxidoreductase subunit E; |
328-414 | 1.29e-04 | ||||
NADH-quinone oxidoreductase subunit E; Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 44.02 E-value: 1.29e-04
|
||||||||
rne | PRK10811 | ribonuclease E; Reviewed |
306-442 | 1.51e-04 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 44.26 E-value: 1.51e-04
|
||||||||
PRK12373 | PRK12373 | NADH-quinone oxidoreductase subunit E; |
324-412 | 1.58e-04 | ||||
NADH-quinone oxidoreductase subunit E; Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 44.02 E-value: 1.58e-04
|
||||||||
SepH | NF040712 | septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
318-420 | 1.82e-04 | ||||
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments. Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 1.82e-04
|
||||||||
tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
319-412 | 1.88e-04 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 43.64 E-value: 1.88e-04
|
||||||||
COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
323-387 | 1.97e-04 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.84 E-value: 1.97e-04
|
||||||||
PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
318-415 | 2.06e-04 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.07 E-value: 2.06e-04
|
||||||||
PTZ00144 | PTZ00144 | dihydrolipoamide succinyltransferase; Provisional |
361-414 | 2.17e-04 | ||||
dihydrolipoamide succinyltransferase; Provisional Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.52 E-value: 2.17e-04
|
||||||||
PRK10905 | PRK10905 | cell division protein DamX; Validated |
330-414 | 2.47e-04 | ||||
cell division protein DamX; Validated Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.00 E-value: 2.47e-04
|
||||||||
COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
347-411 | 2.57e-04 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 2.57e-04
|
||||||||
PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
319-414 | 2.71e-04 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.68 E-value: 2.71e-04
|
||||||||
flhF | PRK06995 | flagellar biosynthesis protein FlhF; |
318-429 | 2.77e-04 | ||||
flagellar biosynthesis protein FlhF; Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 43.42 E-value: 2.77e-04
|
||||||||
PRK14950 | PRK14950 | DNA polymerase III subunits gamma and tau; Provisional |
318-413 | 3.16e-04 | ||||
DNA polymerase III subunits gamma and tau; Provisional Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 43.26 E-value: 3.16e-04
|
||||||||
PRK13042 | PRK13042 | superantigen-like protein SSL4; Reviewed; |
325-397 | 3.30e-04 | ||||
superantigen-like protein SSL4; Reviewed; Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 3.30e-04
|
||||||||
DedD | COG3147 | Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
318-378 | 3.33e-04 | ||||
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 40.91 E-value: 3.33e-04
|
||||||||
PRK13042 | PRK13042 | superantigen-like protein SSL4; Reviewed; |
347-411 | 3.36e-04 | ||||
superantigen-like protein SSL4; Reviewed; Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.70 E-value: 3.36e-04
|
||||||||
PRK13042 | PRK13042 | superantigen-like protein SSL4; Reviewed; |
351-413 | 3.42e-04 | ||||
superantigen-like protein SSL4; Reviewed; Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 42.31 E-value: 3.42e-04
|
||||||||
valS | PRK14900 | valyl-tRNA synthetase; Provisional |
319-413 | 3.46e-04 | ||||
valyl-tRNA synthetase; Provisional Pssm-ID: 237855 [Multi-domain] Cd Length: 1052 Bit Score: 43.44 E-value: 3.46e-04
|
||||||||
rad23 | TIGR00601 | UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
337-407 | 3.57e-04 | ||||
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 3.57e-04
|
||||||||
rne | PRK10811 | ribonuclease E; Reviewed |
238-407 | 3.82e-04 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 43.10 E-value: 3.82e-04
|
||||||||
rad23 | TIGR00601 | UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
341-412 | 4.11e-04 | ||||
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 4.11e-04
|
||||||||
PRK08691 | PRK08691 | DNA polymerase III subunits gamma and tau; Validated |
323-454 | 4.24e-04 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.77 E-value: 4.24e-04
|
||||||||
PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
317-401 | 4.25e-04 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.79 E-value: 4.25e-04
|
||||||||
COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
327-391 | 4.35e-04 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.07 E-value: 4.35e-04
|
||||||||
DamX | COG3266 | Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
318-414 | 4.82e-04 | ||||
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 42.53 E-value: 4.82e-04
|
||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
318-419 | 4.91e-04 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 4.91e-04
|
||||||||
tolA | PRK09510 | cell envelope integrity inner membrane protein TolA; Provisional |
319-411 | 5.02e-04 | ||||
cell envelope integrity inner membrane protein TolA; Provisional Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 42.10 E-value: 5.02e-04
|
||||||||
PRK01297 | PRK01297 | ATP-dependent RNA helicase RhlB; Provisional |
318-375 | 5.04e-04 | ||||
ATP-dependent RNA helicase RhlB; Provisional Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 42.59 E-value: 5.04e-04
|
||||||||
PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
318-414 | 5.17e-04 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 5.17e-04
|
||||||||
DedD | COG3147 | Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
346-413 | 5.18e-04 | ||||
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 40.14 E-value: 5.18e-04
|
||||||||
PRK14950 | PRK14950 | DNA polymerase III subunits gamma and tau; Provisional |
325-414 | 5.44e-04 | ||||
DNA polymerase III subunits gamma and tau; Provisional Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.49 E-value: 5.44e-04
|
||||||||
COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
335-403 | 5.77e-04 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.68 E-value: 5.77e-04
|
||||||||
PRK10819 | PRK10819 | transport protein TonB; Provisional |
318-419 | 6.52e-04 | ||||
transport protein TonB; Provisional Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 41.21 E-value: 6.52e-04
|
||||||||
PRK14954 | PRK14954 | DNA polymerase III subunits gamma and tau; Provisional |
321-414 | 6.68e-04 | ||||
DNA polymerase III subunits gamma and tau; Provisional Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 42.24 E-value: 6.68e-04
|
||||||||
COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
343-407 | 7.16e-04 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 42.29 E-value: 7.16e-04
|
||||||||
PRK11907 | PRK11907 | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; |
319-408 | 7.39e-04 | ||||
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase; Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 42.15 E-value: 7.39e-04
|
||||||||
PRK01297 | PRK01297 | ATP-dependent RNA helicase RhlB; Provisional |
322-379 | 7.45e-04 | ||||
ATP-dependent RNA helicase RhlB; Provisional Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.82 E-value: 7.45e-04
|
||||||||
PRK01297 | PRK01297 | ATP-dependent RNA helicase RhlB; Provisional |
335-395 | 7.78e-04 | ||||
ATP-dependent RNA helicase RhlB; Provisional Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.82 E-value: 7.78e-04
|
||||||||
rne | PRK10811 | ribonuclease E; Reviewed |
225-410 | 8.86e-04 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.95 E-value: 8.86e-04
|
||||||||
PRK12373 | PRK12373 | NADH-quinone oxidoreductase subunit E; |
318-411 | 8.99e-04 | ||||
NADH-quinone oxidoreductase subunit E; Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 41.33 E-value: 8.99e-04
|
||||||||
DedD | COG3147 | Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
334-402 | 9.01e-04 | ||||
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 39.37 E-value: 9.01e-04
|
||||||||
PRK07764 | PRK07764 | DNA polymerase III subunits gamma and tau; Validated |
320-414 | 9.29e-04 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 9.29e-04
|
||||||||
DamX | COG3266 | Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
318-401 | 9.34e-04 | ||||
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.37 E-value: 9.34e-04
|
||||||||
PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
325-436 | 9.50e-04 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 41.64 E-value: 9.50e-04
|
||||||||
PHA03378 | PHA03378 | EBNA-3B; Provisional |
323-441 | 1.00e-03 | ||||
EBNA-3B; Provisional Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.59 E-value: 1.00e-03
|
||||||||
PRK13042 | PRK13042 | superantigen-like protein SSL4; Reviewed; |
371-444 | 1.02e-03 | ||||
superantigen-like protein SSL4; Reviewed; Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 41.16 E-value: 1.02e-03
|
||||||||
PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
318-407 | 1.06e-03 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 41.64 E-value: 1.06e-03
|
||||||||
rne | PRK10811 | ribonuclease E; Reviewed |
317-374 | 1.15e-03 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.56 E-value: 1.15e-03
|
||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
322-414 | 1.17e-03 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 1.17e-03
|
||||||||
SAV_2336_NTERM | NF041121 | SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
335-414 | 1.27e-03 | ||||
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems. Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 41.14 E-value: 1.27e-03
|
||||||||
COG5373 | COG5373 | Uncharacterized membrane protein [Function unknown]; |
329-395 | 1.44e-03 | ||||
Uncharacterized membrane protein [Function unknown]; Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.14 E-value: 1.44e-03
|
||||||||
PHA03307 | PHA03307 | transcriptional regulator ICP4; Provisional |
317-414 | 1.49e-03 | ||||
transcriptional regulator ICP4; Provisional Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.31 E-value: 1.49e-03
|
||||||||
DamX | COG3266 | Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
319-413 | 1.52e-03 | ||||
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning]; Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 40.99 E-value: 1.52e-03
|
||||||||
rne | PRK10811 | ribonuclease E; Reviewed |
312-448 | 1.76e-03 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 41.18 E-value: 1.76e-03
|
||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
323-418 | 1.79e-03 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 1.79e-03
|
||||||||
rne | PRK10811 | ribonuclease E; Reviewed |
248-413 | 1.87e-03 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 40.79 E-value: 1.87e-03
|
||||||||
PRK12323 | PRK12323 | DNA polymerase III subunit gamma/tau; |
323-414 | 2.02e-03 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.63 E-value: 2.02e-03
|
||||||||
flhF | PRK06995 | flagellar biosynthesis protein FlhF; |
317-413 | 2.08e-03 | ||||
flagellar biosynthesis protein FlhF; Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 40.33 E-value: 2.08e-03
|
||||||||
PRK07003 | PRK07003 | DNA polymerase III subunit gamma/tau; |
319-414 | 2.22e-03 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 2.22e-03
|
||||||||
PRK12373 | PRK12373 | NADH-quinone oxidoreductase subunit E; |
325-437 | 2.23e-03 | ||||
NADH-quinone oxidoreductase subunit E; Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 40.17 E-value: 2.23e-03
|
||||||||
PRK07994 | PRK07994 | DNA polymerase III subunits gamma and tau; Validated |
318-400 | 2.33e-03 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 40.62 E-value: 2.33e-03
|
||||||||
Rib_recp_KP_reg | pfam05104 | Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
318-395 | 2.38e-03 | ||||
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear. Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 38.18 E-value: 2.38e-03
|
||||||||
PRK07994 | PRK07994 | DNA polymerase III subunits gamma and tau; Validated |
318-411 | 2.45e-03 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 40.23 E-value: 2.45e-03
|
||||||||
PRK14950 | PRK14950 | DNA polymerase III subunits gamma and tau; Provisional |
317-404 | 2.84e-03 | ||||
DNA polymerase III subunits gamma and tau; Provisional Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.18 E-value: 2.84e-03
|
||||||||
PRK14948 | PRK14948 | DNA polymerase III subunit gamma/tau; |
339-415 | 3.01e-03 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.95 E-value: 3.01e-03
|
||||||||
PRK13808 | PRK13808 | adenylate kinase; Provisional |
317-413 | 3.14e-03 | ||||
adenylate kinase; Provisional Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 39.49 E-value: 3.14e-03
|
||||||||
rad23 | TIGR00601 | UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
333-401 | 3.16e-03 | ||||
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair] Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 39.88 E-value: 3.16e-03
|
||||||||
PHA03269 | PHA03269 | envelope glycoprotein C; Provisional |
321-406 | 3.22e-03 | ||||
envelope glycoprotein C; Provisional Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 40.10 E-value: 3.22e-03
|
||||||||
motB | PRK05996 | MotB family protein; |
317-404 | 3.29e-03 | ||||
MotB family protein; Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 39.68 E-value: 3.29e-03
|
||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
317-449 | 3.66e-03 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.92 E-value: 3.66e-03
|
||||||||
PRK14948 | PRK14948 | DNA polymerase III subunit gamma/tau; |
335-412 | 4.08e-03 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.56 E-value: 4.08e-03
|
||||||||
PHA01929 | PHA01929 | putative scaffolding protein |
318-395 | 4.91e-03 | ||||
putative scaffolding protein Pssm-ID: 177328 Cd Length: 306 Bit Score: 38.88 E-value: 4.91e-03
|
||||||||
SAV_2336_NTERM | NF041121 | SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 ... |
317-400 | 5.24e-03 | ||||
SAV_2336 family N-terminal domain; This HMM describes an N-terminal domain shared by SAV_2336 (BAC70047.1) whose C-terminal region suggests restriction enzyme activity (PMID: 18456708), and with other proteins with unrelated C-terminal regions. A member protein was also identified in a kanamycin biosynthetic gene cluster (PMID:16766657), while N-terminal regions of two other member proteins were named Trypco1 in a bioinformatic study (PMID:32101166) of predicted bacterial conflict systems. Pssm-ID: 469044 [Multi-domain] Cd Length: 473 Bit Score: 39.22 E-value: 5.24e-03
|
||||||||
PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
322-448 | 5.38e-03 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.54 E-value: 5.38e-03
|
||||||||
PHA01929 | PHA01929 | putative scaffolding protein |
318-414 | 5.81e-03 | ||||
putative scaffolding protein Pssm-ID: 177328 Cd Length: 306 Bit Score: 38.88 E-value: 5.81e-03
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PRK10905 | PRK10905 | cell division protein DamX; Validated |
317-395 | 6.07e-03 | ||||
cell division protein DamX; Validated Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 38.77 E-value: 6.07e-03
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PRK14948 | PRK14948 | DNA polymerase III subunit gamma/tau; |
318-393 | 6.17e-03 | ||||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.18 E-value: 6.17e-03
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PRK11901 | PRK11901 | hypothetical protein; Reviewed |
333-403 | 6.39e-03 | ||||
hypothetical protein; Reviewed Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 38.51 E-value: 6.39e-03
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rpsP | PRK14521 | 30S ribosomal protein S16; Provisional |
320-400 | 6.74e-03 | ||||
30S ribosomal protein S16; Provisional Pssm-ID: 237744 [Multi-domain] Cd Length: 186 Bit Score: 37.83 E-value: 6.74e-03
|
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PRK07994 | PRK07994 | DNA polymerase III subunits gamma and tau; Validated |
317-412 | 7.16e-03 | ||||
DNA polymerase III subunits gamma and tau; Validated Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 38.69 E-value: 7.16e-03
|
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rpsP | PRK14521 | 30S ribosomal protein S16; Provisional |
344-408 | 7.26e-03 | ||||
30S ribosomal protein S16; Provisional Pssm-ID: 237744 [Multi-domain] Cd Length: 186 Bit Score: 37.45 E-value: 7.26e-03
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rne | PRK10811 | ribonuclease E; Reviewed |
328-398 | 7.26e-03 | ||||
ribonuclease E; Reviewed Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 38.87 E-value: 7.26e-03
|
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PRK11901 | PRK11901 | hypothetical protein; Reviewed |
345-407 | 8.54e-03 | ||||
hypothetical protein; Reviewed Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 38.13 E-value: 8.54e-03
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rplD | PRK14907 | 50S ribosomal protein L4; Provisional |
317-405 | 8.57e-03 | ||||
50S ribosomal protein L4; Provisional Pssm-ID: 184900 [Multi-domain] Cd Length: 295 Bit Score: 38.01 E-value: 8.57e-03
|
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PHA01929 | PHA01929 | putative scaffolding protein |
318-414 | 9.11e-03 | ||||
putative scaffolding protein Pssm-ID: 177328 Cd Length: 306 Bit Score: 38.11 E-value: 9.11e-03
|
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PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
319-408 | 9.30e-03 | ||||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 38.77 E-value: 9.30e-03
|
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PRK13808 | PRK13808 | adenylate kinase; Provisional |
319-422 | 9.60e-03 | ||||
adenylate kinase; Provisional Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 37.94 E-value: 9.60e-03
|
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SepH | NF040712 | septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
232-373 | 9.80e-03 | ||||
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments. Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 38.21 E-value: 9.80e-03
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Blast search parameters | ||||
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