|
Name |
Accession |
Description |
Interval |
E-value |
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
159-288 |
8.16e-37 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 142.02 E-value: 8.16e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 159 KDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 238
Cdd:COG0666 77 GADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTP 156
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 38638917 239 LHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 288
Cdd:COG0666 157 LHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAaenGHLEIVKLLLEAG 209
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
162-288 |
1.64e-36 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 141.24 E-value: 1.64e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHD 241
Cdd:COG0666 113 VNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHL 192
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 38638917 242 AANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 288
Cdd:COG0666 193 AAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAaenGNLEIVKLLLEAG 242
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
162-276 |
1.31e-28 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 118.13 E-value: 1.31e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHD 241
Cdd:COG0666 146 VNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDL 225
|
90 100 110
....*....|....*....|....*....|....*
gi 38638917 242 AANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVAN 276
Cdd:COG0666 226 AAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAA 260
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
159-288 |
1.01e-27 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 115.82 E-value: 1.01e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 159 KDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 238
Cdd:COG0666 44 LLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETP 123
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 38638917 239 LHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 288
Cdd:COG0666 124 LHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAaanGNLEIVKLLLEAG 176
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
173-265 |
2.88e-21 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 90.18 E-value: 2.88e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 173 LHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLA-AGAEVNTKGlddDTPLHDAANNGHYKVV 251
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEhADVNLKDNG---RTALHYAARSGHLEIV 77
|
90
....*....|....
gi 38638917 252 KLLLRYGGNPQQSN 265
Cdd:pfam12796 78 KLLLEKGADINVKD 91
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
162-272 |
5.43e-19 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 90.01 E-value: 5.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHD 241
Cdd:COG0666 179 VNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLL 258
|
90 100 110
....*....|....*....|....*....|.
gi 38638917 242 AANNGHYKVVKLLLRYGGNPQQSNRKGETPL 272
Cdd:COG0666 259 AAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
161-275 |
1.14e-17 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 88.48 E-value: 1.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 161 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLH 240
Cdd:PHA02874 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLH 195
|
90 100 110
....*....|....*....|....*....|....*
gi 38638917 241 DAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA 275
Cdd:PHA02874 196 NAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA 230
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
206-288 |
6.34e-16 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 75.15 E-value: 6.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 206 LHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYggNPQQSNRKGETPLKVA---NSPTMVN 282
Cdd:pfam12796 1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH--ADVNLKDNGRTALHYAarsGHLEIVK 78
|
....*.
gi 38638917 283 LLLGKG 288
Cdd:pfam12796 79 LLLEKG 84
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
695-1309 |
2.18e-15 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 83.27 E-value: 2.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 695 FKKEEKLSKMKLEEKEwlfKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSkDRP 774
Cdd:PTZ00121 1208 AEEERKAEEARKAEDA---KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA-DEL 1283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 775 SKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDFK 854
Cdd:PTZ00121 1284 KKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAE 1363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 855 GEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKERRRDSRAREKRDYREPFFRKKDRDYLDKNSE-KRKEQTEKHKSVPG 933
Cdd:PTZ00121 1364 EKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEeKKKADEAKKKAEEA 1443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 934 YLSEKDKKRRESAEAGRDRKDALESCKERRDGRAKPEEVHR-EELKECGCESgfKDKSDgDFGKGLEPWERHHPAREKEK 1012
Cdd:PTZ00121 1444 KKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEA--KKKAD-EAKKAAEAKKKADEAKKAEE 1520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1013 KdgpdKERKEKTKPERYKEKSSDKDKSEKSILEKCQKDKEFDKCFKEKKDTKEKHKDTHGKDKERKAS-LDQGKEKKEKA 1091
Cdd:PTZ00121 1521 A----KKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEeAKKAEEARIEE 1596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1092 FPGIISEDFSEKKDDKKGKEKSWYIADIFTDESEDDRDScmgSGFKMGEASDLPRTDGLQEKEEGREAYASDRHRKSSDK 1171
Cdd:PTZ00121 1597 VMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKV---EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED 1673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1172 QHPERQKDKEPRDRRKDRGAADAGRDKKEKVfekhKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAED 1251
Cdd:PTZ00121 1674 KKKAEEAKKAEEDEKKAAEALKKEAEEAKKA----EELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEA 1749
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 38638917 1252 KAKSKHKEKSDKEHSKERKSSRSADAEKSLLEKLEEEALHEYREDSNDKISEVSSDSF 1309
Cdd:PTZ00121 1750 KKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNF 1807
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
159-288 |
6.34e-15 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 78.07 E-value: 6.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 159 KDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 238
Cdd:COG0666 11 LLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTL 90
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 38638917 239 LHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 288
Cdd:COG0666 91 LHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAaynGNLEIVKLLLEAG 143
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
162-288 |
4.00e-14 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 77.76 E-value: 4.00e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLH---RAAIRGDARRIKELISEGADVNVKDFAGWTALH-EACNRGYYDVAKQLLAAGAEVNTKGLDDDT 237
Cdd:PHA03095 40 VNFRGEYGKTPLHlylHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHlYLYNATTLDVIKLLIKAGADVNAKDKVGRT 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 38638917 238 PLHD-AAN-NGHYKVVKLLLRYGGNPQQSNRKGETPLKV----AN-SPTMVNLLLGKG 288
Cdd:PHA03095 120 PLHVyLSGfNINPKVIRLLLRKGADVNALDLYGMTPLAVllksRNaNVELLRLLIDAG 177
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1692-2355 |
6.45e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 78.44 E-value: 6.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1692 ASPRPDQSRPTGVPTPTSVLSCPSYEEVmhTPRT-------PSCSADDYADLVFDCA-DSQHSTPVPTAPTSACSPsffd 1763
Cdd:PHA03247 2502 GPPDPDAPPAPSRLAPAILPDEPVGEPV--HPRMltwirglEELASDDAGDPPPPLPpAAPPAAPDRSVPPPRPAP---- 2575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1764 RFSVASSGLSENASQAPARPLSTnlyrsvsvdirRTPeeefsVGDKlfrqqSVPAASSYDSPMPPsmEDRAPLPPVPAEK 1843
Cdd:PHA03247 2576 RPSEPAVTSRARRPDAPPQSARP-----------RAP-----VDDR-----GDPRGPAPPSPLPP--DTHAPDPPPPSPS 2632
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1844 FACLSPGYYSPDYGLPSPKVDALHCPPAAVVTVTPSPEGVFSSLQAKPS-PSPRAellVPSLEGALPpDLDTSEDQQATA 1922
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQrPRRRA---ARPTVGSLT-SLADPPPPPPTP 2708
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1923 AIIPPEPSYLEPLDEGPFSAVITEEPVEWAHPSEQALASSLIGGTSENPVSWPVGSDLLLKSPQRFPES-PKRFCPADPL 2001
Cdd:PHA03247 2709 EPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAgPPRRLTRPAV 2788
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2002 HSAAPgpfsASEAPYPAPPASPAPYALPVAEPGLEDVKDGVDAVPAAISTSEAAPYAPPSGLESFFSNCKSLpeAPL-DV 2080
Cdd:PHA03247 2789 ASLSE----SRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSV--APGgDV 2862
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2081 APEPACVAAVAQVEAlgplensfldgsrglshlgqvEPVPWADAFAGPEDDLDLGPFSLPELPLQTKDAADGEAEPVEES 2160
Cdd:PHA03247 2863 RRRPPSRSPAAKPAA---------------------PARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQP 2921
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2161 LAPPEEMPPGAPgvinggdvstvvaeEPPALPPDQASTRLPAELEPEPSGEPKlDVALEAAVEAEtVPEERARGDPDSSV 2240
Cdd:PHA03247 2922 QPPPPPQPQPPP--------------PPPPRPQPPLAPTTDPAGAGEPSGAVP-QPWLGALVPGR-VAVPRFRVPQPAPS 2985
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2241 EPAPVPPEQRPLGSGDQGAEAEgppAASLCAPDGPAPNTVAQAQAADgagPEDDTEASRAAAPAEGPPGGIQPEAAEPKP 2320
Cdd:PHA03247 2986 REAPASSTPPLTGHSLSRVSSW---ASSLALHEETDPPPVSLKQTLW---PPDDTEDSDADSLFDSDSERSDLEALDPLP 3059
|
650 660 670
....*....|....*....|....*....|....*
gi 38638917 2321 taEAPKAPRVEEiPQRMTRNRAQMLANQSKQGPPP 2355
Cdd:PHA03247 3060 --PEPHDPFAHE-PDPATPEAGARESPSSQFGPPP 3091
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
181-289 |
1.04e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 73.38 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 181 DARRIKELISEGADVNVKD-FAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGG 259
Cdd:PHA02878 146 EAEITKLLLSYGADINMKDrHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGA 225
|
90 100 110
....*....|....*....|....*....|....
gi 38638917 260 NPQQSNRKGETPLKVANSP----TMVNLLLGKGT 289
Cdd:PHA02878 226 STDARDKCGNTPLHISVGYckdyDILKLLLEHGV 259
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
162-231 |
3.04e-12 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 64.75 E-value: 3.04e-12
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEgADVNVKDFaGWTALHEACNRGYYDVAKQLLAAGAEVNTK 231
Cdd:pfam12796 23 ANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKDN-GRTALHYAARSGHLEIVKLLLEKGADINVK 90
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
162-288 |
3.13e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 71.23 E-value: 3.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIR--GDARRIKELISEGADVNVKDFAGWTALHEA--CNRGYYDVAKQLLAAGAEVN-------- 229
Cdd:PHA03100 99 VNAPDNNGITPLLYAISKksNSYSIVEYLLDNGANVNIKNSDGENLLHLYleSNKIDLKILKLLIDKGVDINaknrvnyl 178
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 230 -TKGLDDD-------TPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 288
Cdd:PHA03100 179 lSYGVPINikdvygfTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAilnNNKEIFKLLLNNG 248
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
131-288 |
3.78e-12 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 72.02 E-value: 3.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 131 NSPVDTTPKHPSQSTVCQKGTPNSASktkdkVNKRNERGETRLHRAAIRG-DARRIKELISEGADVNVKDFAGWTALHEA 209
Cdd:PHA02876 274 NTPLHHASQAPSLSRLVPKLLERGAD-----VNAKNIKGETPLYLMAKNGyDTENIRTLIMLGADVNAADRLYITPLHQA 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 210 CNRGYY-DVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA----NSPTMVNLL 284
Cdd:PHA02876 349 STLDRNkDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAlcgtNPYMSVKTL 428
|
....
gi 38638917 285 LGKG 288
Cdd:PHA02876 429 IDRG 432
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1797-2355 |
8.03e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 71.51 E-value: 8.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1797 RRTPEEEFSVGDKLFRQQSVPAASSYDSPMPPSMEDRAPLP------PVPAEKFACLS--PGYYSPDYGLPSPKVDALHC 1868
Cdd:PHA03247 2481 RRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdepvgePVHPRMLTWIRglEELASDDAGDPPPPLPPAAP 2560
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1869 PPAAVVTVTPS------PEGVFSSLQAKPSPSP-----------RAELLVPSLEGALPPDlDTSEDQQATAaiipPEPSY 1931
Cdd:PHA03247 2561 PAAPDRSVPPPrpaprpSEPAVTSRARRPDAPPqsarprapvddRGDPRGPAPPSPLPPD-THAPDPPPPS----PSPAA 2635
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1932 LEPLDEGPFSAVITEEPVEWAHPSE-----QALASSLIGGTSENPVSW-------PVGSDLLLKSPQRFPESPKRfcPAD 1999
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGRvsrprRARRLGRAAQASSPPQRPrrraarpTVGSLTSLADPPPPPPTPEP--APH 2713
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2000 PLHSAAPGPFSASEAPYPAPPASPAPYALPVAEPGLEDVKDGVDAVPAAIST--SEAAPYAPPSGlesffsnckslpeaP 2077
Cdd:PHA03247 2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGppAPAPPAAPAAG--------------P 2779
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2078 LDVAPEPACVAAVAQVEALgPLENSFLDGSRGLShlgqvEPVPWADAFAGPEDDLDLGPFSLPELPLQTKdaadgeaEPV 2157
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESL-PSPWDPADPPAAVL-----APAAALPPAASPAGPLPPPTSAQPTAPPPPP-------GPP 2846
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2158 EESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPD 2237
Cdd:PHA03247 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP 2926
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2238 SSVEPAPVPPEQRPlgsgdqgaeaegPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPggiQPEAAE 2317
Cdd:PHA03247 2927 PQPQPPPPPPPRPQ------------PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPS---REAPAS 2991
|
570 580 590
....*....|....*....|....*....|....*...
gi 38638917 2318 PKPTAEAPKAPRVEeipqrmtrNRAQMLANQSKQGPPP 2355
Cdd:PHA03247 2992 STPPLTGHSLSRVS--------SWASSLALHEETDPPP 3021
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2149-2393 |
3.10e-11 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 69.11 E-value: 3.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2149 AADGEAEPVEESLAP-PEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKldvaleaAVEAETV 2227
Cdd:PRK07003 367 APGGGVPARVAGAVPaPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAP-------PATADRG 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2228 PEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGP 2307
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAP--ASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2308 PGGIQPEAAEPKPTAeAPKAPRVEEIPQRMT-------------------RNRAQMLANQSKQGPPPSEKECAPTPA--- 2365
Cdd:PRK07003 518 REDAPAAAAPPAPEA-RPPTPAAAAPAARAGgaaaaldvlrnagmrvssdRGARAAAAAKPAAAPAAAPKPAAPRVAvqv 596
|
250 260
....*....|....*....|....*...
gi 38638917 2366 PVTRAKARGSEDDDAQAQHPRKRRFQRS 2393
Cdd:PRK07003 597 PTPRARAATGDAPPNGAARAEQAAESRG 624
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
107-288 |
3.77e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 68.94 E-value: 3.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 107 RAGYplsERQQVALLMQMTAEESANSPVDTTPKHPSQSTVCQKGTPNSASKTKDKVNKRNERGETRLHRAAIRGDARRIK 186
Cdd:PHA02876 316 KNGY---DTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIIN 392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 187 ELISEGADVNVKDFAGWTALHEA-CNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAA-NNGHYKVVKLLLRYGGNPQQS 264
Cdd:PHA02876 393 TLLDYGADIEALSQKIGTALHFAlCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACkKNCKLDVIEMLLDNGADVNAI 472
|
170 180
....*....|....*....|....*
gi 38638917 265 NRKGETPLKVA-NSPTMVNLLLGKG 288
Cdd:PHA02876 473 NIQNQYPLLIAlEYHGIVNILLHYG 497
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
184-260 |
4.41e-11 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 67.77 E-value: 4.41e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38638917 184 RIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGN 260
Cdd:PHA03100 174 RVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
181-288 |
5.67e-11 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 67.74 E-value: 5.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 181 DARRIKELISEGADVNVKDFAGWTALHEACNRG---YYDVAKQLLAAGAEVNTKGLDDDTPLHD-AANNGHYKVVKLLLR 256
Cdd:PHA03095 26 TVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSsekVKDIVRLLLEAGADVNAPERCGFTPLHLyLYNATTLDVIKLLIK 105
|
90 100 110
....*....|....*....|....*....|....*..
gi 38638917 257 YGGNPQQSNRKGETPLKV-----ANSPTMVNLLLGKG 288
Cdd:PHA03095 106 AGADVNAKDKVGRTPLHVylsgfNINPKVIRLLLRKG 142
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1897-2385 |
5.81e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 68.81 E-value: 5.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1897 AELLVPSLEGALP-PDLDTSEDQQAtaaiiPPEPSYLEPldegpfsAVITEEPV-EWAHPSEQALASSLiggtsENPVSW 1974
Cdd:PHA03247 2484 AEARFPFAAGAAPdPGGGGPPDPDA-----PPAPSRLAP-------AILPDEPVgEPVHPRMLTWIRGL-----EELASD 2546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1975 PVGSDLLLKSPQRFPESPKRFCPADPLHSAAPGPFSASEAPYPAPPASPAPYALPVAEPGledvKDGVDAVPAAISTSEA 2054
Cdd:PHA03247 2547 DAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRG----DPRGPAPPSPLPPDTH 2622
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2055 APYAPPSGLESFFSNCKSLPEAPLDVAPEPACVAAVAQV--------EALGPLENSFLDGSRGLSHLGQVEPVP-WADAF 2125
Cdd:PHA03247 2623 APDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrprrarrLGRAAQASSPPQRPRRRAARPTVGSLTsLADPP 2702
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2126 AGPEDDLDLGPFSLPELPLQTKDAADGEAEPVeeslAPPEEMPPGAP-GVINGGDVSTVVAEEPPALPPDQASTRLPAEl 2204
Cdd:PHA03247 2703 PPPPTPEPAPHALVSATPLPPGPAAARQASPA----LPAAPAPPAVPaGPATPGGPARPARPPTTAGPPAPAPPAAPAA- 2777
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2205 EPEPSGEPKLDVALEAAVEAETVPeerargdPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASLCAPDGPAPntvaqaq 2284
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSP-------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP------- 2843
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2285 aadgAGPEDDTEASRAAAPaeGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQ----RMTRNRAQMLANQSKQGPPPSEKEC 2360
Cdd:PHA03247 2844 ----GPPPPSLPLGGSVAP--GGDVRRRPPSRSPAAKPAAPARPPVRRLARpavsRSTESFALPPDQPERPPQPQAPPPP 2917
|
490 500
....*....|....*....|....*
gi 38638917 2361 APTPAPVTRAKARGSEDDDAQAQHP 2385
Cdd:PHA03247 2918 QPQPQPPPPPQPQPPPPPPPRPQPP 2942
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
177-257 |
5.57e-10 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 64.92 E-value: 5.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 177 AIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLR 256
Cdd:PTZ00322 90 AASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSR 169
|
.
gi 38638917 257 Y 257
Cdd:PTZ00322 170 H 170
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
162-288 |
1.08e-09 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 63.75 E-value: 1.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNE-RGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLH 240
Cdd:PHA02878 160 INMKDRhKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLH 239
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 38638917 241 DAANN-GHYKVVKLLLRYGGNPQ-QSNRKGETPLKVA-NSPTMVNLLLGKG 288
Cdd:PHA02878 240 ISVGYcKDYDILKLLLEHGVDVNaKSYILGLTALHSSiKSERKLKLLLEYG 290
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2162-2364 |
3.54e-09 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 62.56 E-value: 3.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2162 APPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVE 2241
Cdd:PRK07003 420 ATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAP 499
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2242 PAPVPPEQrplgsgdqgAEAEGPPAASlcAPDGPAPNTvAQAQAADGAGPEDDTEASRA--AAPA--------------E 2305
Cdd:PRK07003 500 SAATPAAV---------PDARAPAAAS--REDAPAAAA-PPAPEARPPTPAAAAPAARAggAAAAldvlrnagmrvssdR 567
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38638917 2306 GPPGGIQPEAAEPKPTAEAPKAPRVE-EIPQ-RMTRNRAQMLANQSKQGPPPSEKECAPTP 2364
Cdd:PRK07003 568 GARAAAAAKPAAAPAAAPKPAAPRVAvQVPTpRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
677-1549 |
4.51e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 4.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 677 NDLSTENKLKVLKHDRDHFKKEEKLskmKLEEKEWLFKDEKSLKRIKDTNKDISRSFREEKDRSNKAEKERSLKEKSPKE 756
Cdd:PTZ00121 1048 IDEDIDGNHEGKAEAKAHVGQDEGL---KPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKA 1124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 757 EKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQFLENEDTKFSLSD 836
Cdd:PTZ00121 1125 EDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEA 1204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 837 DQRDRWFSDLSDSSfdfKGEDSwdspvtdyrdMKSDSVAKLilETVKEDSKERRRDSRAREKRDYRE----PFFRKKDRD 912
Cdd:PTZ00121 1205 ARKAEEERKAEEAR---KAEDA----------KKAEAVKKA--EEAKKDAEEAKKAEEERNNEEIRKfeeaRMAHFARRQ 1269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 913 YLDKNSEKRKEQT-----EKHKSVPGYLSEKDKKRRESAEAGRDRKDALESCKERRDGRAKPEEVHR--EELKECGCESG 985
Cdd:PTZ00121 1270 AAIKAEEARKADElkkaeEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKkaEEAKKAAEAAK 1349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 986 FKDKSDGDFGKglepwerhhpAREKEKKDGPDKERKEKTKPERYKEKSSDKDKSEKsILEKCQKDKEFDKCFKEKKDTKE 1065
Cdd:PTZ00121 1350 AEAEAAADEAE----------AAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE-AKKKAEEDKKKADELKKAAAAKK 1418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1066 KHKDTHGKDKERKASlDQGKEKKEKAFPgiisedfsekkddkkgkekswyiADIFTDESEDDRdscmgsgfkmgEASDLP 1145
Cdd:PTZ00121 1419 KADEAKKKAEEKKKA-DEAKKKAEEAKK-----------------------ADEAKKKAEEAK-----------KAEEAK 1463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1146 RtdglqEKEEGREAyaSDRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKVFEKHKEKKDKESTEKYKDRKDRA 1225
Cdd:PTZ00121 1464 K-----KAEEAKKA--DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA 1536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1226 SVDSTQDKKNKQKLPEKAEKKHAAEDKAKSkhkEKSDKEHSKERKSSRSADAEKSLLEKLEEEALHEYREDSNDKISEVS 1305
Cdd:PTZ00121 1537 DEAKKAEEKKKADELKKAEELKKAEEKKKA---EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAK 1613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1306 SDSfTDRGQEPGLTAFLEVSFTEPPGDDKPRESACLPEKLKEKERHRHSSSSSKKSHDRERAKKEKAEKKEKGEDYKEGG 1385
Cdd:PTZ00121 1614 KAE-EAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1386 SRKDSGQYEKDFLEadaygvsynMKADIEDELDKTIELFSTEKKDKNDSErEPSKKIEKELKPygSSAINILKEKKKREK 1465
Cdd:PTZ00121 1693 ALKKEAEEAKKAEE---------LKKKEAEEKKKAEELKKAEEENKIKAE-EAKKEAEEDKKK--AEEAKKDEEEKKKIA 1760
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1466 HREKWRDEKERHRDRHADGLLRHHRDELLRHHRDEQKPATRDKDSPPRVLKDKSRDEGPRLGDAKLKEkfkDGAEKEKGD 1545
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEME---DSAIKEVAD 1837
|
....
gi 38638917 1546 PVKM 1549
Cdd:PTZ00121 1838 SKNM 1841
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
202-255 |
5.17e-09 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 54.20 E-value: 5.17e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 38638917 202 GWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLL 255
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PHA02878 |
PHA02878 |
ankyrin repeat protein; Provisional |
161-275 |
1.59e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222939 [Multi-domain] Cd Length: 477 Bit Score: 59.89 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 161 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGY-YDVAKQLLAAGAEVNTK----GLdd 235
Cdd:PHA02878 193 NVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKdYDILKLLLEHGVDVNAKsyilGL-- 270
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 38638917 236 dTPLHDAANNGhyKVVKLLLRYGGNPQQSNRKGETPLKVA 275
Cdd:PHA02878 271 -TALHSSIKSE--RKLKLLLEYGADINSLNSYKLTPLSSA 307
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
185-272 |
1.76e-08 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 59.59 E-value: 1.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 185 IKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQS 264
Cdd:PHA02874 107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186
|
....*...
gi 38638917 265 NRKGETPL 272
Cdd:PHA02874 187 DNNGESPL 194
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
218-286 |
2.26e-08 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 59.91 E-value: 2.26e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 38638917 218 AKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLG 286
Cdd:PTZ00322 98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAeenGFREVVQLLSR 169
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2152-2372 |
4.96e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 58.73 E-value: 4.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2152 GEAEPVEESLAPPEEMPPGAPgvinggdVSTVVAEEPPALPPDQASTRLPAELEPEPSGEP-KLDVALEAAVEAETVPEE 2230
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAA-------APAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPaRRSPAPEALAAARQASAR 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2231 RARGDPDSSVEPAPVP-PEQRPlgsgdQGAEAEGPPAASLCAPDGPAPntvaqaqaadgagpeddtEASRAAAPAEGPPG 2309
Cdd:PRK12323 443 GPGGAPAPAPAPAAAPaAAARP-----AAAGPRPVAAAAAAAPARAAP------------------AAAPAPADDDPPPW 499
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38638917 2310 GIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKA 2372
Cdd:PRK12323 500 EELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVA 562
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
162-275 |
1.22e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 56.90 E-value: 1.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEAC--NRGyydvAKQLLAAGAEVNTKGLDDDTPL 239
Cdd:PHA02874 183 ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIihNRS----AIELLINNASINDQDIDGSTPL 258
|
90 100 110
....*....|....*....|....*....|....*..
gi 38638917 240 HDAANNGHYK-VVKLLLRYGGNPQQSNRKGETPLKVA 275
Cdd:PHA02874 259 HHAINPPCDIdIIDILLYHKADISIKDNKGENPIDTA 295
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
171-222 |
1.50e-07 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 49.97 E-value: 1.50e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 38638917 171 TRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLL 222
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
162-261 |
2.57e-07 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 55.80 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARR-IKELISEGADVNVKDFAGWTALHeACNRGY---YDVAKQLLAAGAEVNTKGLDDDT 237
Cdd:PHA03095 76 VNAPERCGFTPLHLYLYNATTLDvIKLLIKAGADVNAKDKVGRTPLH-VYLSGFninPKVIRLLLRKGADVNALDLYGMT 154
|
90 100
....*....|....*....|....*.
gi 38638917 238 PLHD--AANNGHYKVVKLLLRYGGNP 261
Cdd:PHA03095 155 PLAVllKSRNANVELLRLLIDAGADV 180
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2149-2389 |
5.06e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 5.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2149 AADGEAEPVEESLAPPEEMP-PGAPGvinggdvstvvAEEPPALPPDQASTRLPAELEPEPSGEPKldvALEAAVEAETV 2227
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAArPAAPA-----------APAAPAAPAPAGAAAAPAEASAAPAPGVA---APEHHPKHVAV 659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2228 PEERARGD--PDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcapdgPAPNTVAQAQAADGAGPEDDTEASRAAAPAE 2305
Cdd:PRK07764 660 PDASDGGDgwPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPA------PAPAATPPAGQADDPAAQPPQAAQGASAPSP 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2306 GPPGGIqPEAAEPKPTAEAPKAPRVEEIPQrmtrnraqmlanqskqgPPPSEKECAPTPAPVTRAKARGSEDDDAQAQHP 2385
Cdd:PRK07764 734 AADDPV-PLPPEPDDPPDPAGAPAQPPPPP-----------------APAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDD 795
|
....
gi 38638917 2386 RKRR 2389
Cdd:PRK07764 796 EDRR 799
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
185-288 |
7.76e-07 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 54.29 E-value: 7.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 185 IKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHY-----KVVKLLLRYGG 259
Cdd:PHA03100 18 IKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNltdvkEIVKLLLEYGA 97
|
90 100 110
....*....|....*....|....*....|....
gi 38638917 260 NPQQSNRKGETPLKVA-----NSPTMVNLLLGKG 288
Cdd:PHA03100 98 NVNAPDNNGITPLLYAiskksNSYSIVEYLLDNG 131
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
648-1274 |
7.91e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.98 E-value: 7.91e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 648 SISQELKLKSFTYEYEDSKQkSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKD--EKSLKRIKDT 725
Cdd:pfam02463 163 AGSRLKRKKKEALKKLIEET-ENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLdyLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 726 NKDISRSFREEKDRSNK------AEKERSLKEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISK-------EK 792
Cdd:pfam02463 242 LQELLRDEQEEIESSKQeiekeeEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDeeklkesEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 793 EKIFKEDKEKLKKEKVYREDSAFDE-------YCNKNQFLENEDTKFSLSDDQRDRWFSDLSDssfDFKGEDSWDSPVTD 865
Cdd:pfam02463 322 EKKKAEKELKKEKEEIEELEKELKEleikreaEEEEEEELEKLQEKLEQLEEELLAKKKLESE---RLSSAAKLKEEELE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 866 YRDMKSDSVAKLI-LETVKEDSKERRRDSRAREKRDYREPFFRKKDRDYLDKNSEKRKEQTEKHKSVPGYLSEKDKKRRE 944
Cdd:pfam02463 399 LKSEEEKEAQLLLeLARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQ 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 945 SAEAGRDRKDALESCKERRDGRAKPEEVHREELKECGCESGFKDKSDGDFGKGlepwERHHPAREKEKKDGPDKERKEKT 1024
Cdd:pfam02463 479 LVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRL----GDLGVAVENYKVAISTAVIVEVS 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1025 KPERYKEKSSDKDKSEKSILEKCQKDKEFDKCFK--EKKDTKEKHKDTHGKDKERKASLD-QGKEKKEKAFPGIISEDFS 1101
Cdd:pfam02463 555 ATADEVEERQKLVRALTELPLGARKLRLLIPKLKlpLKSIAVLEIDPILNLAQLDKATLEaDEDDKRAKVVEGILKDTEL 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1102 EKKDDKKGKEKSWYIADIFTDESEDDRDSCMGSGFKMgeASDLPRTDGLQEKEEGREAYASDRHRKSSDKQHPERQKDKE 1181
Cdd:pfam02463 635 TKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSEL--TKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEEL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1182 PRDrrkdrgaadagRDKKEKVFEKHKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKS 1261
Cdd:pfam02463 713 KKL-----------KLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEERE 781
|
650
....*....|...
gi 38638917 1262 DKEHSKERKSSRS 1274
Cdd:pfam02463 782 KTEKLKVEEEKEE 794
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1903-2279 |
8.27e-07 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 54.58 E-value: 8.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1903 SLEGALPPDLDTSEDQQATAAIIPPEPSylePLDEGPFSAVITEEPVEWAHPSEQALAS--SLIGGTSENPVSwpvgsdl 1980
Cdd:pfam17823 43 SGDAVPRADNKSSEQ*NFCAATAAPAPV---TLTKGTSAAHLNSTEVTAEHTPHGTDLSepATREGAADGAAS------- 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1981 llkspqRFPESPKRFCP---ADPLHSAAPGPFSaseapypappaspapyaLPVAEPGLEDVKDGVDAVPAAISTSEAAPY 2057
Cdd:pfam17823 113 ------RALAAAASSSPssaAQSLPAAIAALPS-----------------EAFSAPRAAACRANASAAPRAAIAAASAPH 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2058 -APPSGLESFFSNCKSLPEAPLDVAPEPACVAAVAQVEALGPLENSFL-----DGSRGLSHLGQVEPVP-WADAFAGPED 2130
Cdd:pfam17823 170 aASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATatghpAAGTALAAVGNSSPAAgTVTAAVGTVT 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2131 DLDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMP-------PGAP-GVINGGDVSTVVAEEP-----PALPPDQAS 2197
Cdd:pfam17823 250 PAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPsdtmarnPAAPmGAQAQGPIIQVSTDQPvhntaGEPTPSPSN 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2198 TRLPAElEPEPSGEPKLDVALEAAVE-----AETVPEERARGDPD-----SSVEPAPVPPEQRPLGSGD-QGAEAEGPPA 2266
Cdd:pfam17823 330 TTLEPN-TPKSVASTNLAVVTTTKAQakepsASPVPVLHTSMIPEveatsPTTQPSPLLPTQGAAGPGIlLAPEQVATEA 408
|
410
....*....|...
gi 38638917 2267 ASLCAPDGPAPNT 2279
Cdd:pfam17823 409 TAGTASAGPTPRS 421
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
221-275 |
1.26e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 47.34 E-value: 1.26e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 38638917 221 LLAAG-AEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA 275
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2124-2341 |
1.67e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 53.73 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2124 AFAGPEDDLDLGPFSLPELPL-QTKDAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPA 2202
Cdd:PRK12323 362 AFRPGQSGGGAGPATAAAAPVaQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASA 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2203 ELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRplgsgdqGAEAEGPPAASLCAPDGPAPNTVAQ 2282
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP-------APADDDPPPWEELPPEFASPAPAQP 514
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 38638917 2283 AQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAePKPTAEAPKAPRVEEIPQRMTRNR 2341
Cdd:PRK12323 515 DAAPAGWVAESIPDPATADPDDAFETLAPAPAAA-PAPRAAAATEPVVAPRPPRASASG 572
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
176-288 |
1.67e-06 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 53.72 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 176 AAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKV----- 250
Cdd:PLN03192 532 VASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIfrily 611
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38638917 251 --------------------------VKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKG 288
Cdd:PLN03192 612 hfasisdphaagdllctaakrndltaMKELLKQGLNVDSEDHQGATALQVAmaeDHVDMVRLLIMNG 678
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1627-2245 |
2.03e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.79 E-value: 2.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1627 PADDGRKKGLDIPAK----KPPGlDPPFKDKKLKESTPIPPAAENKLHPASGADSKDWLAGPHMKEVLPASPRPDQ-SRP 1701
Cdd:PHA03247 2580 PAVTSRARRPDAPPQsarpRAPV-DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDdPAP 2658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1702 TGVPTPTSVLSCPSYEEVMHTPRTPS-CSADDYADLVFDCADSQHSTPVPTAPTSACSPSFFDRFSVASSGLSENASQAP 1780
Cdd:PHA03247 2659 GRVSRPRRARRLGRAAQASSPPQRPRrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAA 2738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1781 ARPLSTNLYRSVSVDIRRTPeeefsvgdklfrqqSVPAASSYDSPMPPSMEDRAPLPPVPAEKFACLSPGYYSpdygLPS 1860
Cdd:PHA03247 2739 PAPPAVPAGPATPGGPARPA--------------RPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRES----LPS 2800
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1861 PKVDAlhcPPAAVVTvTPSPEGVFSSLQAKPSPSPRAELLVPSlegALPPdldtsedqqataaiiPPEPSYLEPldEGpf 1940
Cdd:PHA03247 2801 PWDPA---DPPAAVL-APAAALPPAASPAGPLPPPTSAQPTAP---PPPP---------------GPPPPSLPL--GG-- 2854
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1941 sAVITEEPVEWAHPSEQALASSligGTSENPVSWPVGSDLLLKSPQRFPESPKRfcPADPlhsaaPGPFSASEAPYPAPP 2020
Cdd:PHA03247 2855 -SVAPGGDVRRRPPSRSPAAKP---AAPARPPVRRLARPAVSRSTESFALPPDQ--PERP-----PQPQAPPPPQPQPQP 2923
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2021 ASPAPYALPVAEPGLEDvkdgvdavPAAISTSEAAPYAPPSGLESFFSNCKSLP---EAPLDVAPEPAcvaavAQVEALG 2097
Cdd:PHA03247 2924 PPPPQPQPPPPPPPRPQ--------PPLAPTTDPAGAGEPSGAVPQPWLGALVPgrvAVPRFRVPQPA-----PSREAPA 2990
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2098 PLENSfldgsrgLSHLGQVEPVPWADAFAGPEDDlDLGPFSLpelpLQTkdaadgeaepveesLAPPEEMPPGAPGVING 2177
Cdd:PHA03247 2991 SSTPP-------LTGHSLSRVSSWASSLALHEET-DPPPVSL----KQT--------------LWPPDDTEDSDADSLFD 3044
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 38638917 2178 GDVSTVVAEEPPALPPDQAStrlPAELEPEPSgepkldvaleaaveaetVPEERARGDPDSSVEPAPV 2245
Cdd:PHA03247 3045 SDSERSDLEALDPLPPEPHD---PFAHEPDPA-----------------TPEAGARESPSSQFGPPPL 3092
|
|
| PHA02876 |
PHA02876 |
ankyrin repeat protein; Provisional |
160-285 |
2.27e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165207 [Multi-domain] Cd Length: 682 Bit Score: 53.14 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 160 DKVNKRNERgeTRLHRAAIRGDARRIKE-LISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTP 238
Cdd:PHA02876 137 DKINESIEY--MKLIKERIQQDELLIAEmLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSV 214
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 38638917 239 LHDAANNGHYKVVKLLLrygGNPQQSNRKGETPLK-VANSPTMVNLLL 285
Cdd:PHA02876 215 LECAVDSKNIDTIKAII---DNRSNINKNDLSLLKaIRNEDLETSLLL 259
|
|
| PHA02875 |
PHA02875 |
ankyrin repeat protein; Provisional |
170-288 |
3.00e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165206 [Multi-domain] Cd Length: 413 Bit Score: 52.30 E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 170 ETRLHRAAIRGDARRIKELISEGA---DVNVKDfaGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNG 246
Cdd:PHA02875 69 ESELHDAVEEGDVKAVEELLDLGKfadDVFYKD--GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMG 146
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 38638917 247 HYKVVKLLLRY---------------------------------GGNPQQSNRKGETPLKVA----NSPTMVNLLLGKG 288
Cdd:PHA02875 147 DIKGIELLIDHkacldiedccgctpliiamakgdiaickmlldsGANIDYFGKNGCVAALCYaienNKIDIVRLFIKRG 225
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2238-2378 |
3.62e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.41 E-value: 3.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2238 SSVEPAPVPPEQRPLGSGDQGAEAEGPPAAslcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQ---PE 2314
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQ---AAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPaaaPA 443
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38638917 2315 AAEPKPTAEAPKAPRVEEIPQRMTrnraqmlanqskQGPPPSEKECAPTPAPVTRAKARGSEDD 2378
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVRVA------------PEPAVASAAPAPAAAPAAARLTPTEEGD 495
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
165-287 |
3.69e-06 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 52.33 E-value: 3.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 165 RNERGETRLHRAA--IRGDARRIKELISEGADVNVKDFAGWTALHEA-----CNRGYYDvakQLLAAGAEVNTKGLDDDT 237
Cdd:PHA03095 183 VDDRFRSLLHHHLqsFKPRARIVRELIRAGCDPAATDMLGNTPLHSMatgssCKRSLVL---PLLIAGISINARNRYGQT 259
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 38638917 238 PLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGK 287
Cdd:PHA03095 260 PLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMvrnNNGRAVRAALAK 312
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
161-239 |
5.24e-06 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 50.72 E-value: 5.24e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 38638917 161 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPL 239
Cdd:COG0666 211 DVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
|
|
| PHA02874 |
PHA02874 |
ankyrin repeat protein; Provisional |
177-290 |
5.67e-06 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 165205 [Multi-domain] Cd Length: 434 Bit Score: 51.50 E-value: 5.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 177 AIR-GDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQL-----------------------LAAGAEVNTKG 232
Cdd:PHA02874 42 AIRsGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLidngvdtsilpipciekdmiktiLDCGIDVNIKD 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38638917 233 LDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLLGKGTY 290
Cdd:PHA02874 122 AELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAikhNFFDIIKLLLEKGAY 182
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2158-2389 |
6.01e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.80 E-value: 6.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2158 EESLAPPE---------EMPPGAPGVINGGdvstvVAEEPPALPPDqaSTRLPAELEPEPSGEPKLDVALEAAVEAETVP 2228
Cdd:PRK12323 342 ELALAPDEyagftmtllRMLAFRPGQSGGG-----AGPATAAAAPV--AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAA 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2229 EERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASLCAPDGPAPNtvaqaqaadgagpeddteasrAAAPAEGPP 2308
Cdd:PRK12323 415 AARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARP---------------------AAAGPRPVA 473
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2309 GGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGS-EDDDAQAQHPRK 2387
Cdd:PRK12323 474 AAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETlAPAPAAAPAPRA 553
|
..
gi 38638917 2388 RR 2389
Cdd:PRK12323 554 AA 555
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
162-209 |
8.08e-06 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 45.42 E-value: 8.08e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEA 209
Cdd:pfam13857 9 LNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2115-2337 |
1.14e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.14 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2115 QVEPVPWADAFAGPEDDLDLGPFS-LPELPLQTKDAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPP 2193
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEeAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2194 DQ--ASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARgdpdssvEPAPVPPEQRPLGSGDQGAEAEGPPAASLCA 2271
Cdd:PRK07764 667 DGwpAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAAT-------PPAGQADDPAAQPPQAAQGASAPSPAADDPV 739
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 38638917 2272 PDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGiQPEAAEPKPTAEAPKAPRVEEIPQRM 2337
Cdd:PRK07764 740 PLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSP-PSEEEEMAEDDAPSMDDEDRRDAEEV 804
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
2157-2372 |
1.18e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 51.24 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2157 VEESLAPPEEMPPGAPGVINGgdvSTVVAEEPPALPPdQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEER--ARG 2234
Cdd:PRK10263 349 VDVPPAQPTVAWQPVPGPQTG---EPVIAPAPEGYPQ-QSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPyyAPA 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2235 DPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAAslcapdgPAPntvaqaqaadGAGPEDDTEASRAAAPAEGPPGGI-QP 2313
Cdd:PRK10263 425 PEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFA-------PQS----------TYQTEQTYQQPAAQEPLYQQPQPVeQQ 487
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38638917 2314 EAAEPKPTAEAPKAPR-----VEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKA 2372
Cdd:PRK10263 488 PVVEPEPVVEETKPARpplyyFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAA 551
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2140-2384 |
1.21e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.94 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2140 PELPLQTKDAADGEAEPVEESLA----PPEEMPPGAPGVINGGDVStvvAEEPPALPPDQASTRLPAELEPEPSGEPKLD 2215
Cdd:PHA03307 153 PAAGASPAAVASDAASSRQAALPlsspEETARAPSSPPAEPPPSTP---PAAASPRPPRRSSPISASASSPAPAPGRSAA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2216 VALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASLCA-----------------PDGPAPN 2278
Cdd:PHA03307 230 DDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAsssssprerspspspssPGSGPAP 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2279 TVAQAQAADGAGPEDDT-------EASRAAAPAEGPPGGIQPEAAEPKPtAEAPKAPRVEEIPQRMTRNRAQmlanqskq 2351
Cdd:PHA03307 310 SSPRASSSSSSSRESSSsstssssESSRGAAVSPGPSPSRSPSPSRPPP-PADPSSPRKRPRPSRAPSSPAA-------- 380
|
250 260 270
....*....|....*....|....*....|...
gi 38638917 2352 gpppsekecapTPAPVTRAKARGSEDDDAQAQH 2384
Cdd:PHA03307 381 -----------SAGRPTRRRARAAVAGRARRRD 402
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
1721-1990 |
1.48e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 50.34 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1721 HTPRTPSCSADDYADLVFDCADSQhstpVPTAPTSACSPSFFDRFSVASSGL-------------SENASQAPARPLSTN 1787
Cdd:pfam17823 90 HTPHGTDLSEPATREGAADGAASR----ALAAAASSSPSSAAQSLPAAIAALpseafsapraaacRANASAAPRAAIAAA 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1788 LYRSVSVDIRRTPEEEFSVGDKLFRQQSVPAASSYDSP---MPPSMEDRAPLPPV-PAEKFACLSPGYYSPDYGLPSPKV 1863
Cdd:pfam17823 166 SAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPatlTPARGISTAATATGhPAAGTALAAVGNSSPAAGTVTAAV 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1864 DALhcPPAAVVTVTPSPEGVFSSLQAKPSPSPRAELLVPSleGALPPDldtsedqqaTAAIIPPEPSylEPLDEGPFSAV 1943
Cdd:pfam17823 246 GTV--TPAALATLAAAAGTVASAAGTINMGDPHARRLSPA--KHMPSD---------TMARNPAAPM--GAQAQGPIIQV 310
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38638917 1944 ITEEPV----------------EWAHPSEQALASSLIGGTSENPVSWPVGSDLLLKSPQRFPE 1990
Cdd:pfam17823 311 STDQPVhntageptpspsnttlEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPE 373
|
|
| ANK |
smart00248 |
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ... |
234-261 |
1.61e-05 |
|
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Pssm-ID: 197603 [Multi-domain] Cd Length: 30 Bit Score: 43.73 E-value: 1.61e-05
10 20
....*....|....*....|....*...
gi 38638917 234 DDDTPLHDAANNGHYKVVKLLLRYGGNP 261
Cdd:smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
|
|
| PLN03192 |
PLN03192 |
Voltage-dependent potassium channel; Provisional |
176-236 |
2.12e-05 |
|
Voltage-dependent potassium channel; Provisional
Pssm-ID: 215625 [Multi-domain] Cd Length: 823 Bit Score: 50.25 E-value: 2.12e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 38638917 176 AAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDD 236
Cdd:PLN03192 629 AAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDD 689
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2116-2349 |
2.42e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 49.87 E-value: 2.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2116 VEPVPWADAFAGPEDDLDLGPFSLPELPLQTkdAADGEAEPVEESLAPPEEMPPGAPGVinggdvstvVAEEPPALPPDQ 2195
Cdd:PRK12323 390 AAPAAAAPAPAAPPAAPAAAPAAAAAARAVA--AAPARRSPAPEALAAARQASARGPGG---------APAPAPAPAAAP 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2196 ASTRLPAELEPEPsgepkldvaleAAVEAETVPEERARGDPDSSVEPAPVPPEQRPlgsgdqGAEAEGPPAASLCAPDGP 2275
Cdd:PRK12323 459 AAAARPAAAGPRP-----------VAAAAAAAPARAAPAAAPAPADDDPPPWEELP------PEFASPAPAQPDAAPAGW 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2276 APNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRV--EEIPQRMT----RNRAQMLANQS 2349
Cdd:PRK12323 522 VAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMfdGDWPALAArlpvRGLAQQLARQS 601
|
|
| PHA02741 |
PHA02741 |
hypothetical protein; Provisional |
162-257 |
2.73e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 165108 [Multi-domain] Cd Length: 169 Bit Score: 46.96 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDA----RRIKELISEGADVNVKD-FAGWTALHEACNRGYYDVAKQLL-AAGAEVNTKGLDD 235
Cdd:PHA02741 53 LNATDDAGQMCIHIAAEKHEAqlaaEIIDHLIELGADINAQEmLEGDTALHLAAHRRDHDLAEWLCcQPGIDLHFCNADN 132
|
90 100
....*....|....*....|..
gi 38638917 236 DTPLHDAANNGHYKVVKLLLRY 257
Cdd:PHA02741 133 KSPFELAIDNEDVAMMQILREI 154
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
1948-2370 |
3.13e-05 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 49.29 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1948 PVEWAH----PSEQALASSLIGGTSEnPVSWPVGSDLLLKSPQRFPESPKRFCPADPLHSAAPGPFSASEAPYPAPPASP 2023
Cdd:COG5180 28 PELWAAanndAVSQGDRSALASSPTR-PYARKIFEPLDIKLALGKPQLPSVAEPEAYLDPAPPKSSPDTPEEQLGAPAGD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2024 APYALPVAEPGLEDVKDGVDAVPAAI---STSEAAPYAPPSGLESFFSNCKSLPEAPLDVAPEPACVAAvaqvealgple 2100
Cdd:COG5180 107 LLVLPAAKTPELAAGALPAPAAAAALpkaKVTREATSASAGVALAAALLQRSDPILAKDPDGDSASTLP----------- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2101 nsfldgsRGLSHLGQVEPVPWADAFAGPEDDLDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMPPGAPGVINGgdv 2180
Cdd:COG5180 176 -------PPAEKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAQEEPPDLTGGADHPRPEAASSPKVDPPSTSEARSR--- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2181 STVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLgsgdQGAE 2260
Cdd:COG5180 246 PATVDAQPEMRPPADAKERRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARPIDVKGVASAPPATRPV----RPPG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2261 AEGPPAASLCAPDGPAPNTVaqaqaadgagPEddteasrAAAPAEGPPGGIQPeAAEPKPTAEAPK-APRveeiPQRMTR 2339
Cdd:COG5180 322 GARDPGTPRPGQPTERPAGV----------PE-------AASDAGQPPSAYPP-AEEAVPGKPLEQgAPR----PGSSGG 379
|
410 420 430
....*....|....*....|....*....|.
gi 38638917 2340 NRAqmlANQSKQGPPPSEKECAPTPAPVTRA 2370
Cdd:COG5180 380 DGA---PFQPPNGAPQPGLGRRGAPGPPMGA 407
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
2110-2382 |
3.27e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 49.32 E-value: 3.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2110 LSHLGQVEPVPWADAFAGPEDDL--DLGPFSLPE-LPLQTKDAADGEAEPveeSLAPPE---------EMPPGAPGVING 2177
Cdd:PRK08691 289 LQQLALIQAVPSALAHDDPDSDIlhRLAQTISGEqIQLYYQIAVHGKRDL---SLAPDEyagfmmtllRMLAFAPLAAAS 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2178 GDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPkldvalEAAVEAETVPEERArgdpdssvepapVPPEQRPLGSGDQ 2257
Cdd:PRK08691 366 CDANAVIENTELQSPSAQTAEKETAAKKPQPRPEA------ETAQTPVQTASAAA------------MPSEGKTAGPVSN 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2258 GAEAEGPP------AASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAePKPTAEAPKAPRVE 2331
Cdd:PRK08691 428 QENNDVPPwedapdEAQTAAGTAQTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSEN-PIQATPNDEAVETE 506
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 38638917 2332 EIPQRMTRNRAQMLANQSKQGPPPSEKECAPTP--APVTRAKARGSEDDDAQA 2382
Cdd:PRK08691 507 TFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDweHAAPADTAGGGADEEAEA 559
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
162-275 |
3.53e-05 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 48.87 E-value: 3.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDA--RRIKELISEGADVNVKDFAGWTALHEACN--RGYYDVAKQLLAAGAEVNTKGLDDDT 237
Cdd:PHA03095 145 VNALDLYGMTPLAVLLKSRNAnvELLRLLIDAGADVYAVDDRFRSLLHHHLQsfKPRARIVRELIRAGCDPAATDMLGNT 224
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 38638917 238 PLHDAANNGHYK--VVKLLLRYGGNPQQSNRKGETPLKVA 275
Cdd:PHA03095 225 PLHSMATGSSCKrsLVLPLLIAGISINARNRYGQTPLHYA 264
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2189-2325 |
5.14e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 5.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2189 PALPPDQASTRLPAElEPEPSGEPkldVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLgSGDQGAEAEGPPAAS 2268
Cdd:PRK14951 371 EAAAPAEKKTPARPE-AAAPAAAP---VAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPA-AAAPAAAPAAAPAAV 445
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 38638917 2269 LCAPDGPAPNTVAQAQAADGAGPEDDTeASRAAAPAEGPPggiqpeAAEPKPTAEAP 2325
Cdd:PRK14951 446 ALAPAPPAQAAPETVAIPVRVAPEPAV-ASAAPAPAAAPA------AARLTPTEEGD 495
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2148-2327 |
6.82e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 6.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2148 DAADGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALP-PDQASTRLPAELEPEPSGEpklDVALEAAVeaeT 2226
Cdd:PHA03247 266 DRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAALAGAPLALPaPPDPPPPAPAGDAEEEDDE---DGAMEVVS---P 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2227 VPEERAR------------GDPDSSVEP----------APVPPEQR--------PLGSGDQGAEAEGP----PAASLCAP 2272
Cdd:PHA03247 340 LPRPRQHyplgfpkrrrptWTPPSSLEDlsagrhhpkrASLPTRKRrsarhaatPFARGPGGDDQTRPaapvPASVPTPA 419
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 38638917 2273 DGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPeAAEPKPTAEAPKA 2327
Cdd:PHA03247 420 PTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATE-PAPDDPDDATRKA 473
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2219-2389 |
7.92e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 7.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2219 EAAVEAETVPEERARGDPDSSVEPAPVPPEQRPlgsgdqgaeAEGPPAAslcAPDGPAPNTVAQAQAADGAGPEDDTEAS 2298
Cdd:PRK07764 371 ERGLLARLERLERRLGVAGGAGAPAAAAPSAAA---------AAPAAAP---APAAAAPAAAAAPAPAAAPQPAPAPAPA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2299 RAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDD 2378
Cdd:PRK07764 439 PAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPE 518
|
170
....*....|.
gi 38638917 2379 DAQAQHPRKRR 2389
Cdd:PRK07764 519 ILAAVPKRSRK 529
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
666-795 |
7.94e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.09 E-value: 7.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 666 KQKSDKAILLENDLST-ENKLKVLkhDRDHFKKEE-------KLSKMKLEEKEWLFKDEKSLKRIKDTNKDISRSFREEK 737
Cdd:TIGR04523 36 KQLEKKLKTIKNELKNkEKELKNL--DKNLNKDEEkinnsnnKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIK 113
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38638917 738 -DRSNKAEKERSL----KEKSPKEEKLRLYKEERKKKSKDRPSKLEKKNDLKEDKISKEKEKI 795
Cdd:TIGR04523 114 nDKEQKNKLEVELnkleKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELN 176
|
|
| PHA03100 |
PHA03100 |
ankyrin repeat protein; Provisional |
161-230 |
9.37e-05 |
|
ankyrin repeat protein; Provisional
Pssm-ID: 222984 [Multi-domain] Cd Length: 422 Bit Score: 47.74 E-value: 9.37e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 161 KVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNT 230
Cdd:PHA03100 184 PINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKT 253
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
170-259 |
1.04e-04 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 47.70 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 170 ETRLHRAAIRGDARRIKELI-SEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAE-VNTKGLDD----DTPLHDAA 243
Cdd:cd22192 18 ESPLLLAAKENDVQAIKKLLkCPSCDLFQRGALGETALHVAALYDNLEAAVVLMEAAPElVNEPMTSDlyqgETALHIAV 97
|
90
....*....|....*.
gi 38638917 244 NNGHYKVVKLLLRYGG 259
Cdd:cd22192 98 VNQNLNLVRELIARGA 113
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
234-266 |
1.07e-04 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 41.51 E-value: 1.07e-04
10 20 30
....*....|....*....|....*....|....
gi 38638917 234 DDDTPLHDAA-NNGHYKVVKLLLRYGGNPQQSNR 266
Cdd:pfam00023 1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARDK 34
|
|
| PHA03321 |
PHA03321 |
tegument protein VP11/12; Provisional |
2168-2386 |
1.27e-04 |
|
tegument protein VP11/12; Provisional
Pssm-ID: 223041 [Multi-domain] Cd Length: 694 Bit Score: 47.65 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2168 PPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVE----PA 2243
Cdd:PHA03321 430 PPGAPAPRRDNDPPPPPRARPGSTPACARRARAQRARDAGPEYVDPLGALRRLPAGAAPPPEPAAAPSPATYYTrmggGP 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2244 PVPP-------EQRPLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGP----EDDTEASRAAAPAEGP----- 2307
Cdd:PHA03321 510 PRLPprnrateTLRPDWGPPAAAPPEQMEDPYLEPDDDRFDRRDGAAAAATSHPReapaPDDDPIYEGVSDSEEPvyeei 589
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2308 --------PGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKAR-GSEDD 2378
Cdd:PHA03321 590 ptprvyqnPLPRPMEGAGEPPDLDAPTSPWVEEENPIYGWGDSPLFSPPPAARFPPPDPALSPEPPALPAHRPRpGALAP 669
|
....*...
gi 38638917 2379 DAQAQHPR 2386
Cdd:PHA03321 670 DGPANLAA 677
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2151-2267 |
1.33e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 46.68 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2151 DGEAEPVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDQASTRLPAELEP---------EPSGEPKLDVALEAA 2221
Cdd:NF040712 189 DPDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASarrrragveQPEDEPVGPGAAPAA 268
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 38638917 2222 VEAE--------TVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAA 2267
Cdd:NF040712 269 EPDEatrdagepPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAP 322
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
237-285 |
1.39e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 41.88 E-value: 1.39e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 38638917 237 TPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA---NSPTMVNLLL 285
Cdd:pfam13637 3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAasnGNVEVLKLLL 54
|
|
| Ank |
pfam00023 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
202-229 |
1.84e-04 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.
Pssm-ID: 459634 [Multi-domain] Cd Length: 34 Bit Score: 40.74 E-value: 1.84e-04
10 20
....*....|....*....|....*....
gi 38638917 202 GWTALHEACNR-GYYDVAKQLLAAGAEVN 229
Cdd:pfam00023 2 GNTPLHLAAGRrGNLEIVKLLLSKGADVN 30
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2148-2393 |
2.62e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.70 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2148 DAADGEAEPVEESLAPPEEMPP----GAPGVINggdVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAV- 2222
Cdd:PHA03307 12 EAAAEGGEFFPRPPATPGDAADdllsGSQGQLV---SDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTp 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2223 -------EAETVPEERARGDPDSSVEPAPVPPEQR--------PLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAAD 2287
Cdd:PHA03307 89 twslstlAPASPAREGSPTPPGPSSPDPPPPTPPPaspppspaPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAAS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2288 GAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMT------RNRAQMLANQSKQGPPPSEKECA 2361
Cdd:PHA03307 169 SRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSpapapgRSAADDAGASSSDSSSSESSGCG 248
|
250 260 270
....*....|....*....|....*....|....*..
gi 38638917 2362 P-----TPAPVTRAKARGSEDDDAQAQHPRKRRFQRS 2393
Cdd:PHA03307 249 WgpeneCPLPRPAPITLPTRIWEASGWNGPSSRPGPA 285
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
2230-2337 |
3.32e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2230 ERARGDPDSsvepapVPPEQRPLgSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGP----EDDTEASRAAAPAE 2305
Cdd:PRK12270 16 QQYLADPNS------VDPSWREF-FADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPapapPAAAAPAAPPKPAA 88
|
90 100 110
....*....|....*....|....*....|..
gi 38638917 2306 GPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRM 2337
Cdd:PRK12270 89 AAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPL 120
|
|
| ANK |
smart00248 |
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ... |
202-229 |
3.87e-04 |
|
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Pssm-ID: 197603 [Multi-domain] Cd Length: 30 Bit Score: 39.88 E-value: 3.87e-04
10 20
....*....|....*....|....*...
gi 38638917 202 GWTALHEACNRGYYDVAKQLLAAGAEVN 229
Cdd:smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2120-2501 |
4.17e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.08 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2120 PWADAFAGPEDDLD-------LG-PFSLPELplqTKDAADGEaePVEESlaPPEEMPPGAPGvinGGDVSTVVAEEPPAL 2191
Cdd:PHA03247 2439 PGGDVLAGLAADGDpffartiLGaPFSLSLL---LGELFPGA--PVYRR--PAEARFPFAAG---AAPDPGGGGPPDPDA 2508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2192 PPdQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERArGDPdssvePAPVPPEQRPlgsgdqgaeaegPPAASLCA 2271
Cdd:PHA03247 2509 PP-APSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASDDA-GDP-----PPPLPPAAPP------------AAPDRSVP 2569
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2272 PDGPAPNTVAQAQAADGAGPEDDTEASRAAAPaeGPPGGIQPEAAEPKPTAEAPKAPRveeipqrmtrnraqmlanqskq 2351
Cdd:PHA03247 2570 PPRPAPRPSEPAVTSRARRPDAPPQSARPRAP--VDDRGDPRGPAPPSPLPPDTHAPD---------------------- 2625
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2352 gPPPSEKECAPTPAPVTR-AKARGSEDDDAQAQHPRKRRFQRSTQQLQQQLNTSTQQ--TREVIQQTLAAIVDAIKLDAI 2428
Cdd:PHA03247 2626 -PPPPSPSPAANEPDPHPpPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQrpRRRAARPTVGSLTSLADPPPP 2704
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38638917 2429 EPYHSDRANPYFEYLQIRKKIEEKRKilccITPQAPQCYAEYVTYTGSyLLDGKPLSKLHIPVIAPPPSLAEP 2501
Cdd:PHA03247 2705 PPTPEPAPHALVSATPLPPGPAAARQ----ASPALPAAPAPPAVPAGP-ATPGGPARPARPPTTAGPPAPAPP 2772
|
|
| PHA03095 |
PHA03095 |
ankyrin-like protein; Provisional |
162-258 |
4.21e-04 |
|
ankyrin-like protein; Provisional
Pssm-ID: 222980 [Multi-domain] Cd Length: 471 Bit Score: 45.40 E-value: 4.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 162 VNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLA----AGAEVNTkgldddt 237
Cdd:PHA03095 250 INARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAknpsAETVAAT------- 322
|
90 100
....*....|....*....|....*....
gi 38638917 238 pLHDAANNGHY--------KVVKLLLRYG 258
Cdd:PHA03095 323 -LNTASVAGGDipsdatrlCVAKVVLRGA 350
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
651-944 |
4.51e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 45.73 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 651 QELKLKSFTYEYEDSKQKSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEWLFKDEKSLKRIKDTNKDIS 730
Cdd:pfam02463 743 QKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQL 822
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 731 RSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKS-KDRPSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVY 809
Cdd:pfam02463 823 LIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEiTKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKEL 902
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 810 REDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDFKGEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKER 889
Cdd:pfam02463 903 EEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEE 982
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 38638917 890 rrdsrarekrdyrepfFRKKDRDYLDKNSEKRKEQTEKhKSVPGYLSEKDKKRRE 944
Cdd:pfam02463 983 ----------------FEEKEERYNKDELEKERLEEEK-KKLIRAIIEETCQRLK 1020
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
188-240 |
4.63e-04 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 40.41 E-value: 4.63e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 38638917 188 LISEG-ADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLH 240
Cdd:pfam13857 1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALD 54
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2218-2380 |
4.68e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.75 E-value: 4.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2218 LEAAVEAETVPEERARGDPDSSVEPAPVPPEQ--RPLGSGDQGAEAEGPPAASLCAPDGPAPNTVAQAQ-AADGAGPEDD 2294
Cdd:PRK07764 580 GDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEaaRPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAaPEHHPKHVAV 659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2295 TEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPpsekecAPTPAPVTRAKARG 2374
Cdd:PRK07764 660 PDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAA------QPPQAAQGASAPSP 733
|
....*.
gi 38638917 2375 SEDDDA 2380
Cdd:PRK07764 734 AADDPV 739
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2189-2333 |
6.37e-04 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 44.76 E-value: 6.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2189 PALPPDQASTRLPAELEPEPSGEPkldVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAAS 2268
Cdd:NF040712 197 RPLATVPRLAREPADARPEEVEPA---PAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEA 273
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38638917 2269 LcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKA--PRVEEI 2333
Cdd:NF040712 274 T-RDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAsvPSWDDV 339
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
2174-2367 |
6.63e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.46 E-value: 6.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2174 VINGGDVSTVVAEEPPALPPDQASTRLPAELEPEPSgEPKLDVAL-EAAVEAETVPEERArgdPDSSVEPAPVPPEQRPL 2252
Cdd:PRK10263 310 LLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPP-VASVDVPPaQPTVAWQPVPGPQT---GEPVIAPAPEGYPQQSQ 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2253 GSGDQGAEAEG-----PPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAA--EPKPTAEaP 2325
Cdd:PRK10263 386 YAQPAVQYNEPlqqpvQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQStfAPQSTYQ-T 464
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 38638917 2326 KAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPV 2367
Cdd:PRK10263 465 EQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPL 506
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1721-2062 |
8.51e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 8.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1721 HTPRTPSCSADDYADLVFDcADSQHSTP--VPTAPTSACSPSFFDRFSVASSGLSENASQAPARPLSTNLYRSVSVDIRR 1798
Cdd:PHA03307 20 FFPRPPATPGDAADDLLSG-SQGQLVSDsaELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1799 TPEEEFSVGdklfrqqsvPAASSYDSPMPPSMEDRAPLPPVPAEKFACLSPGYYSPDYGLPSPKVDALHCPPAAVVTVTP 1878
Cdd:PHA03307 99 SPAREGSPT---------PPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1879 SPEGVFSSL--QAKPSPSPRAELLVPSLEGALPPDLDTSEDQQATAAIIPPEPSylePLDEGPFSAVITEEPvewAHPSE 1956
Cdd:PHA03307 170 RQAALPLSSpeETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPA---PGRSAADDAGASSSD---SSSSE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1957 QALASSliGGTSENPVswPVGSDLLLKSPQRFPESPKrfcPADPLHSAAPGPFSASEAPYPAPPASPAPYALPVAEPGLE 2036
Cdd:PHA03307 244 SSGCGW--GPENECPL--PRPAPITLPTRIWEASGWN---GPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASS 316
|
330 340
....*....|....*....|....*.
gi 38638917 2037 DVKDGVDAVPAAISTSEAAPYAPPSG 2062
Cdd:PHA03307 317 SSSSSRESSSSSTSSSSESSRGAAVS 342
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2231-2385 |
8.98e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 8.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2231 RARGDPDSSVEPAPVPPEQRPLGSGDQGAE-----AEGPPAASLcAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAE 2305
Cdd:PRK07764 585 EAVVGPAPGAAGGEGPPAPASSGPPEEAARpaapaAPAAPAAPA-PAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2306 GPPGGIQPEAAEPKPTAEAPkAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDDDAQAQHP 2385
Cdd:PRK07764 664 DGGDGWPAKAGGAAPAAPPP-APAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
|
| TRPV5-6 |
cd22192 |
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ... |
169-272 |
9.30e-04 |
|
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.
Pssm-ID: 411976 [Multi-domain] Cd Length: 609 Bit Score: 44.62 E-value: 9.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 169 GETRLHRAAIRgDARRIKELISEGADVNVKD------FAGWTALHEACNRGYYDVAKQLLAAGAEVNT---------KGL 233
Cdd:cd22192 51 GETALHVAALY-DNLEAAVVLMEAAPELVNEpmtsdlYQGETALHIAVVNQNLNLVRELIARGADVVSpratgtffrPGP 129
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 38638917 234 DD-----DTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPL 272
Cdd:cd22192 130 KNliyygEHPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVL 173
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
696-943 |
1.36e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 44.27 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 696 KKEEKLSKMKLEEKEW--LFKDEKSLKRIKDTNKdisrsFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSKDR 773
Cdd:PTZ00108 1103 KVEKLNAELEKKEKELekLKNTTPKDMWLEDLDK-----FEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKK 1177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 774 PSKLEKKNDLKEDKISKEKEKIFKEDKEKLKKEKVYREDSAFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDF 853
Cdd:PTZ00108 1178 EKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDN 1257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 854 KGEDSWDSPVTDYRD---MKSDSVAKLILETVKEDSKERRRDSRARE-------KRDYREPFFRKKDRDYLDKNSEKRKE 923
Cdd:PTZ00108 1258 DEFSSDDLSKEGKPKnapKRVSAVQYSPPPPSKRPDGESNGGSKPSSptkkkvkKRLEGSLAALKKKKKSEKKTARKKKS 1337
|
250 260
....*....|....*....|
gi 38638917 924 QTEKHKSVPGYLSEKDKKRR 943
Cdd:PTZ00108 1338 KTRVKQASASQSSRLLRRPR 1357
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2204-2344 |
1.39e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 43.60 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2204 LEPEPSGEP-KLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGdqGAEAEGPPAASLCAPDGPAPNTVAQ 2282
Cdd:NF040712 199 LATVPRLARePADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAG--VEQPEDEPVGPGAAPAAEPDEATRD 276
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 38638917 2283 AQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPrveeiPQRMTRNRAQM 2344
Cdd:NF040712 277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAP-----KPKRRRRRASV 333
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2189-2342 |
1.87e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.82 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2189 PALPPDQAStrLPAELEPEPSGEPkldVALEAAVEAETVPeeRARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAAS 2268
Cdd:PRK07764 365 PSASDDERG--LLARLERLERRLG---VAGGAGAPAAAAP--SAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAP 437
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 38638917 2269 LCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIPQRMTRNRA 2342
Cdd:PRK07764 438 APAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAAT 511
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2177-2365 |
1.94e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 43.66 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2177 GGDVSTVVAEEPPALPPDQASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGD--PDS---------SVEPAPV 2245
Cdd:PRK14086 79 GRPIRIAITVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDqlPTArpaypayqqRPEPGAW 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2246 PPEQRPLgsGDQGAEAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDT--EASRAAAPAEGPPGGIQPEAAEPKPTA- 2322
Cdd:PRK14086 159 PRAADDY--GWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQrrRDYDHPRPDWDRPRRDRTDRPEPPPGAg 236
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 38638917 2323 ----EAPKAPRVEEIPQRMTRNRAqmlanqskQGPPPSEKECAPTPA 2365
Cdd:PRK14086 237 hvhrGGPGPPERDDAPVVPIRPSA--------PGPLAAQPAPAPGPG 275
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
2104-2369 |
2.33e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 43.51 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2104 LDGSRGLSHLGQVEPV--PWADAFAGPEDDLDLGPFSLPElPLQTKDAADGeaePVEESlappEEMPPGApgvinggdvs 2181
Cdd:PHA03379 405 LEKASEPTYGTPRPPVekPRPEVPQSLETATSHGSAQVPE-PPPVHDLEPG---PLHDQ----HSMAPCP---------- 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2182 tvVAEEPPALPPDQAstrlPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPlgsgdqgAEA 2261
Cdd:PHA03379 467 --VAQLPPGPLQDLE----PGDQLPGVVQDGRPACAPVPAPAGPIVRPWEASLSQVPGVAFAPVMPQPMP-------VEP 533
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2262 EGPPAASLCAPDGPAPntvaqaqaadgagpeddteaSRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPR-VEEIPQR--MT 2338
Cdd:PHA03379 534 VPVPTVALERPVCPAP--------------------PLIAMQGPGETSGIVRVRERWRPAPWTPNPPRsPSQMSVRdrLA 593
|
250 260 270
....*....|....*....|....*....|.
gi 38638917 2339 RNRAQMLANQSKQGPPPSEKECAPTPAPVTR 2369
Cdd:PHA03379 594 RLRAEAQPYQASVEVQPPQLTQVSPQQPMEY 624
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
740-1271 |
2.63e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.42 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 740 SNKAEKERS--LKEKSPKEEKLRLYKEERKKKSKdRPSKLEKKNDLKEDKIS----KEKEKIFKEDKEKLKKEKVYREDS 813
Cdd:pfam02463 148 AMMKPERRLeiEEEAAGSRLKRKKKEALKKLIEE-TENLAELIIDLEELKLQelklKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 814 AFDEYCNKNQFLENEDTKFSLSDDQRDRWFSDLSDSSFDF----KGEDSWDSPVTDYRDMKSDSVAKLILETVKEDSKER 889
Cdd:pfam02463 227 LYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKlaqvLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLE 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 890 RRDSRAREKRDYREPFFRKKDRDYLDKN---SEKRKEQTEKHKSVPGYLSEKDKKRRESAEAGRDRKDALESCKERRDGR 966
Cdd:pfam02463 307 RRKVDDEEKLKESEKEKKKAEKELKKEKeeiEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERL 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 967 AKpEEVHREELKECGCESGFKDKSDGDFGKGLEPWERhhpAREKEKKDGPDKERKEKTKPERYKEKSSDKDKSEKSILEK 1046
Cdd:pfam02463 387 SS-AAKLKEEELELKSEEEKEAQLLLELARQLEDLLK---EEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1047 cqKDKEFDKCFKEKKDTKEKHKDTHGKDKERKASLDQGKEKKEKAFPGIISEDFSEKKDDKKGKEKswYIADIFTDESED 1126
Cdd:pfam02463 463 --DELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIIS--AHGRLGDLGVAV 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1127 DRDSCMGSGFKMGEASDLPRTDGLQEKEEGREA----YASDRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKV 1202
Cdd:pfam02463 539 ENYKVAISTAVIVEVSATADEVEERQKLVRALTelplGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADED 618
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 38638917 1203 FEKHKEKKDKESTEKYKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERKS 1271
Cdd:pfam02463 619 DKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAES 687
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
2240-2394 |
3.27e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.45 E-value: 3.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2240 VEPAPVPPEqRPLGSGDQGA-----EAEGPPAASLCAPDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEGPPGGIQPE 2314
Cdd:NF040712 188 IDPDFGRPL-RPLATVPRLArepadARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAP 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2315 AAEPKPTAEAPKAPRVEEIPQRMTRNRAqmlanqskqgPPPSEKECAPTPAPVTRAKARgsedDDAQAQHPRKRRFQRST 2394
Cdd:NF040712 267 AAEPDEATRDAGEPPAPGAAETPEAAEP----------PAPAPAAPAAPAAPEAEEPAR----PEPPPAPKPKRRRRRAS 332
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2152-2330 |
3.88e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2152 GEAEPVEESLAPPEE-----MPPGAPGVINGGDVSTVVAEEPPALPPdqastrlPAELEPEPSGEPkldvalEAAVEAET 2226
Cdd:PRK07764 365 PSASDDERGLLARLErlerrLGVAGGAGAPAAAAPSAAAAAPAAAPA-------PAAAAPAAAAAP------APAAAPQP 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2227 VPEERARGDPdssvEPAPVPPEQRPLGSGDQGAEAEGPPAAslcaPDGPAPNTVAQAQAADGAGPEDDTE--ASRAAAPA 2304
Cdd:PRK07764 432 APAPAPAPAP----PSPAGNAPAGGAPSPPPAAAPSAQPAP----APAAAPEPTAAPAPAPPAAPAPAAApaAPAAPAAP 503
|
170 180
....*....|....*....|....*.
gi 38638917 2305 EGPPGGIQPEAAEPKPTAEAPKAPRV 2330
Cdd:PRK07764 504 AGADDAATLRERWPEILAAVPKRSRK 529
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
1817-1965 |
5.11e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1817 PAASSYDSPMPPSMEDRAPLPPVPAEKFACLSPgyysPDYGLPSPKvdalhcPPAAVVTVTPSPEGVFSSLQAKPSPSPR 1896
Cdd:PRK14951 385 EAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAP----PAAAPPAPV------AAPAAAAPAAAPAAAPAAVALAPAPPAQ 454
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38638917 1897 AellvpSLEGALPPDLDTSEDQQATAAIIP---PEPSYLEPLDEGPF-----SAVITEEPVEwAHPSEQALASSLIG 1965
Cdd:PRK14951 455 A-----APETVAIPVRVAPEPAVASAAPAPaaaPAAARLTPTEEGDVwhatvQQLAAAEAIT-ALARELALQSELVA 525
|
|
| Ank_3 |
pfam13606 |
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ... |
202-230 |
5.84e-03 |
|
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.
Pssm-ID: 463933 [Multi-domain] Cd Length: 30 Bit Score: 36.47 E-value: 5.84e-03
10 20
....*....|....*....|....*....
gi 38638917 202 GWTALHEACNRGYYDVAKQLLAAGAEVNT 230
Cdd:pfam13606 2 GNTPLHLAARNGRLEIVKLLLENGADINA 30
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2149-2272 |
6.32e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.01 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2149 AADGEAEPVEESLAPPEEMPPGAPGVinggdVSTVVAEEPPALPP--DQASTRLPAELEPEPSGEPkldvALEAAVEAET 2226
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPV-----AQAAAAPAPAAAPAaaASAPAAPPAAAPPAPVAAP----AAAAPAAAPA 439
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 38638917 2227 VPEERARGDPDSSVEPAP----VPPEQRP-LGSGDQGAEAEGPPAASLCAP 2272
Cdd:PRK14951 440 AAPAAVALAPAPPAQAAPetvaIPVRVAPePAVASAAPAPAAAPAAARLTP 490
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2169-2383 |
7.47e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.85 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2169 PGAPGVINGGDVSTVVAEEPPALPPDQastrlPAELEPEPSGEPKLDV---ALEAAVEAETVPEERARGDPDSSVE---- 2241
Cdd:PHA03247 255 PAPPPVVGEGADRAPETARGATGPPPP-----PEAAAPNGAAAPPDGVwgaALAGAPLALPAPPDPPPPAPAGDAEeedd 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2242 ---------PAPVPPEQRPLGSGDQGAEAEGPPAA--SLCAPDGPAPNTVAQAQAADGagpeddteASRAAAP-AEGPPG 2309
Cdd:PHA03247 330 edgamevvsPLPRPRQHYPLGFPKRRRPTWTPPSSleDLSAGRHHPKRASLPTRKRRS--------ARHAATPfARGPGG 401
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 38638917 2310 GIQPEAAEPKP-TAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPApvtrAKARGSEDDDAQAQ 2383
Cdd:PHA03247 402 DDQTRPAAPVPaSVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPA----TEPAPDDPDDATRK 472
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2035-2334 |
7.76e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 7.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2035 LEDVKDGVDAVPAAISTSEAAPyAPPSGLESFFSNCKSLPEAPLDVAPEPACVAAVAQVEALGPLENSFLDGSRGLSHLG 2114
Cdd:PRK07764 574 LAEELGGDWQVEAVVGPAPGAA-GGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEH 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2115 QVEPVPWADAFAGPEDdldlgpfslpelplqtKDAADGEAEPVEESLAPPEEMPPGApgvinggdvstvvAEEPPALPPD 2194
Cdd:PRK07764 653 HPKHVAVPDASDGGDG----------------WPAKAGGAAPAAPPPAPAPAAPAAP-------------AGAAPAQPAP 703
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2195 QASTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcapdg 2274
Cdd:PRK07764 704 APAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPS------ 777
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2275 papntvaqaqaadgaGPEDDTEASRAAAPAEGPPGGIQPEAAEPKPTAEAPKAPRVEEIP 2334
Cdd:PRK07764 778 ---------------PPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEEELGAKKIEEFA 822
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2074-2334 |
7.88e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 41.76 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2074 PEAPLDVAPEPACVAAVAQVEALGPlensfldGSRGLSHLGQVEPVPWADAFAGPEddLDLGPFSLPElPLQTKDAADGE 2153
Cdd:PRK07003 373 PARVAGAVPAPGARAAAAVGASAVP-------AVTAVTGAAGAALAPKAAAAAAAT--RAEAPPAAPA-PPATADRGDDA 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2154 AePVEESLAPPEEMPPGAPGVINGGDVSTVVAEEPPALPPDqaSTRLPAELEPEPSGEPKLDVALEAAVEAETVPEERAR 2233
Cdd:PRK07003 443 A-DGDAPVPAKANARASADSRCDERDAQPPADSGSASAPAS--DAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASRE 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2234 GDPDSSVEPAPVPPEQRPlgSGDQGAEAEGPPAASL---------------CAPDGPAPNTVAQAQAADGAGPeddteas 2298
Cdd:PRK07003 520 DAPAAAAPPAPEARPPTP--AAAAPAARAGGAAAALdvlrnagmrvssdrgARAAAAAKPAAAPAAAPKPAAP------- 590
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 38638917 2299 RAAAPAEGPPGGIQPEAAEPKPTAEAPKA-------PRVEEIP 2334
Cdd:PRK07003 591 RVAVQVPTPRARAATGDAPPNGAARAEQAaesrgapPPWEDIP 633
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
584-790 |
7.90e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 41.96 E-value: 7.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 584 GSSVESLKPVRKRQEHRKRASLSEKKSpflSSAEGAVPKLDKEGKVVKKHKTKHKHKNKEKGQCSISQELKLKSFTYEYE 663
Cdd:PTZ00108 1164 GKASKLRKPKLKKKEKKKKKSSADKSK---KASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSV 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 664 DSKQKSDKAILLENDLSTENKLKVLKHDRDHFKKEEKLSKMKLEEKEW-------LFKDEKSLKRIKDTNKDISRSFREE 736
Cdd:PTZ00108 1241 KRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPskrpdgeSNGGSKPSSPTKKKVKKRLEGSLAA 1320
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 38638917 737 KDRSNKAEKERSLKEKSPKEEKLRLYKEERKKKSkdRPSKLEKKNDLKEDKISK 790
Cdd:PTZ00108 1321 LKKKKKSEKKTARKKKSKTRVKQASASQSSRLLR--RPRKKKSDSSSEDDDDSE 1372
|
|
| CAF-1_p150 |
pfam11600 |
Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide ... |
688-794 |
8.07e-03 |
|
Chromatin assembly factor 1 complex p150 subunit, N-terminal; CAF-1_p150 is a polypeptide subunit of CAF-1, which functions in depositing newly synthesized and acetylated histones H3/H4 into chromatin during DNA replication and repair. CAF-1_p150 includes the HP1 interaction site, the PEST, KER and ED interacting sites. CAF-1_p150 interacts directly with newly synthesized and acetylated histones through the acidic KER and ED domains. The PEST domain is associated with proteins that undergo rapid proteolysis.
Pssm-ID: 402959 [Multi-domain] Cd Length: 164 Bit Score: 39.67 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 688 LKHDRDHFKKEEKLSKMKlEEKEWLFKDEKSLKRikDTNKDISRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYKEERK 767
Cdd:pfam11600 18 LEKDKERLRRQLKLEAEK-EEKERLKEEAKAEKE--RAKEEARRKKEEEKELKEKERREKKEKDEKEKAEKLRLKEEKRK 94
|
90 100
....*....|....*....|....*..
gi 38638917 768 KKSKDRPSKLEKKNDLKEDKISKEKEK 794
Cdd:pfam11600 95 EKQEALEAKLEEKRKKEEEKRLKEEEK 121
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1865-2250 |
8.76e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.68 E-value: 8.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1865 ALHCPPAAVVTVTPSPEGVFSSLQAKPSPSPRAELLVPSLEGALPPDLDTSEDQ-----QATAAIIP---PEP-SYLEPL 1935
Cdd:pfam03154 173 VLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAphtliQQTPTLHPqrlPSPhPPLQPM 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 1936 DEGPFSAVITEEPVEWA--HPSEQALASSLIGGTSENPVSWPvgsdlllksPQRFPESPKRFCPADPLHSAAPGPFSASE 2013
Cdd:pfam03154 253 TQPPPPSQVSPQPLPQPslHGQMPPMPHSLQTGPSHMQHPVP---------PQPFPLTPQSSQSQVPPGPSPAAPGQSQQ 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2014 APYPAPPASPAPYALPVAEPGLEdvkdgvdavPAAISTSEAAPyaPPSGLESFFSNCKSLPEAPLDVAPEPACVAA-VAQ 2092
Cdd:pfam03154 324 RIHTPPSQSQLQSQQPPREQPLP---------PAPLSMPHIKP--PPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSnLPP 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2093 VEALGPLEnsfldgSRGLSHLGQVEPVPWAdaFAGPEDDLDLGPFSLPELPLQTKDAADGEAEPVEESLAPPEEMPPGAP 2172
Cdd:pfam03154 393 PPALKPLS------SLSTHHPPSAHPPPLQ--LMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQ 464
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 38638917 2173 GVINGGDVSTVVaeePPALPPDQASTRLPAeLEPEPSGEPKLDVALEAAVEAETVPEERARGDPDSSVEPAPVPPEQR 2250
Cdd:pfam03154 465 HPFVPGGPPPIT---PPSGPPTSTSSAMPG-IQPPSSASVSSSGPVPAAVSCPLPPVQIKEEALDEAEEPESPPPPPR 538
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2236-2424 |
9.58e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 9.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2236 PDSSVEPAPVPPEQRPLGSGDQGAEAEGPPAASlcAPDGPApntvaqaqaadgagpeddteASRAAAPAEGPPGGIQPEA 2315
Cdd:PRK07764 365 PSASDDERGLLARLERLERRLGVAGGAGAPAAA--APSAAA--------------------AAPAAAPAPAAAAPAAAAA 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38638917 2316 AEPKPTAEAPKAPRVEEIPQRMTRNRAQMLANQSKQGPPPSEKECAPTPAPVTRAKARGSEDDDAQAQHPRKRRFQRSTQ 2395
Cdd:PRK07764 423 PAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
|
170 180
....*....|....*....|....*....
gi 38638917 2396 QlqqqlntSTQQTREVIQQTLAAIVDAIK 2424
Cdd:PRK07764 503 P-------AGADDAATLRERWPEILAAVP 524
|
|
| |
