|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-695 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1426.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYL 80
Cdd:CHL00025 9 WIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFVTLCALLLFAGAVAKSAQFPLHV 240
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:CHL00025 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGI 400
Cdd:CHL00025 329 YMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNIHFQNYGGKHKNPFYSISLWGKNG---VK 477
Cdd:CHL00025 409 PPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEEskkIN 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 478 KNSCLLTMNNNESTYFFSKTKYPIDKNGRKMTRPFMTigHFEHKAVSSYPYESDNTMLFPIFVLGLFTLFVGAIGIPFNQ 557
Cdd:CHL00025 489 KLLLLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFIT--IFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQ 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 558 EGVNLDILSKWLAPSINLLHPNSNNSMDWNEFLKDAVLSVSIAYFGIVIASFLYKPIYSSLKNLEFINSFVKKGPKRILW 637
Cdd:CHL00025 567 EGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFL 646
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 27463520 638 DKILNGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFFDRRVIDGMTNGVGVISFIV 695
Cdd:CHL00025 647 DKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFV 704
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-692 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 700.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYL 80
Cdd:PRK07376 9 WLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFVTLCALLLFAGAVAKSAQFPLHV 240
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK07376 249 WLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGI 400
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnihfqnyggkhknpfysiSLWGKNGVKKNS 480
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG--------------------EFRGNDKELQKE 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 481 CLLTMNNNESTYFFSKtkypidkngrkmtrpfmtiGHFEHKAVSSYPYESDNTMLFPIFVLGLFTLFVGAIGIPFNQEGV 560
Cdd:PRK07376 469 LLAAADAPGHHEGHHE-------------------EHGEHHHHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPWNNRFE 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 561 NLdilskwlapsinLLHPNSNNSM----DWNEFLKDAVLSVSIAYFGIVIASFLYkpiyssLKNLEFINSFVKKGPKril 636
Cdd:PRK07376 530 AF------------LHAPGEALEAaahfEWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFPP--- 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463520 637 wdkilngIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFFDRRVIDGMTNGVGVIS 692
Cdd:PRK07376 589 -------LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVT 637
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-692 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 565.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIPFIPLpvpmligAGLILFPTATKSFRRMWAFQ-SVLLLSIVMIFSIYLsIQQINSSSFYQYVWSWIINNDFSLDFGY 79
Cdd:COG1009 5 WLIPLLPL-------LGALLAGLLGRRLGRRAAGWlAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGLDFGF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 80 LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:COG1009 77 RLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNLLFVTLCALLLFAGAVAKSAQFPLH 239
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 240 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 320 GYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 400 IPPLACFWSKDEILNDSW---LYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnihfqnyggkhknpfysislwgkngv 476
Cdd:COG1009 383 IPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG---------------------------- 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 477 kknsclltmnnnestyffsktkypidkngrkmTRPFMTIGHfehkavssyPYESDNTMLFPIFVLGLFTLFVGAIGIPFn 556
Cdd:COG1009 435 --------------------------------KPRPKTPKH---------PHESPWLMTLPLVVLAVLSLVLGLLLPGL- 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 557 qegvnldiLSKWLAP-SINLLHPNSNNSMDWNeflkdaVLSVSIAYFGIVIASFLYkpiysslknlefinsfvKKGPKRI 635
Cdd:COG1009 473 --------LEGLLAPaAVLGGELHLAHGLLLN------ALPLLLSLLGIALGYLLY-----------------LKRPLPA 521
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 27463520 636 LWDKiLNGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFThFFDRRVIDGMTNGVGVIS 692
Cdd:COG1009 522 LAER-LKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLT 576
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-691 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 560.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIPFIPLpvpmlIGAGLILFptatksFRRMW-----AFQSVLLLSIVMIFSIYLSIQQINSS--SFYQYVWSWIINNDF 73
Cdd:PRK06590 6 WLIVLLPL-----IGALILGL------FGRRIgekwaHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 74 SLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 154 IGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfEIFNNLIYNNEVNLLFVTLCALLLFAGAVAKS 233
Cdd:PRK06590 155 IGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 234 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 314 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLG 393
Cdd:PRK06590 312 STMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYATFLIG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 394 TLSLCGIPPLACFWSKDEILNDSWLYSPIFA-IIAWATAGLTAFYMFRIYLLTFEghlnihfqnygGKHKnpfysislwg 472
Cdd:PRK06590 384 TLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFH-----------GKEK---------- 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 473 kngvkknsclltmnnnestyffsktkypidkngrkmtrpfmtiGHFEHkavssyPYESDNTMLFPIFVLGLFTLFVGAIG 552
Cdd:PRK06590 443 -------------------------------------------EKIHH------PHESPAVMTLPLIVLAVLSVFAGALI 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 553 IPFnqegvnldiLSKWLAPSINLLHPNSNNSmdwnEFLKDAVLSVSIAYFGIVIASFLYkpiyssLKNLEFINSFVKKGP 632
Cdd:PRK06590 474 VPP---------FLGVLPLTTELAHGEAEHH----LPVWVALLPLVVALAGIALAWLLY------LKKPTLPTSIAAPGR 534
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 633 krilwdkilnGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFT-HFFDRRVIDGMTNGVGVI 691
Cdd:PRK06590 535 ----------FLYTLLRNKYYFDELYEKVFVKPGLALARLLwKDGDDGIIDGLVPNSARL 584
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-695 |
3.16e-165 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 487.94 E-value: 3.16e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIPFIPLpvpmlIGAgLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSS---FYQYVWSWIINNDFSLDF 77
Cdd:TIGR01974 4 FLIVFLPL-----IGF-LIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 78 GYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 157
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 158 FTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNnevnllFVTLCALLLFAGAVAKSAQFP 237
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 238 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMS 317
Cdd:TIGR01974 232 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 318 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSL 397
Cdd:TIGR01974 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 398 CGIPPLACFWSKDEILNDSW--LYSPIFAIIAWATAGLTAFYMFRIYLLTfeghlnihfqnyggkhknpfysislwgkng 475
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMV------------------------------ 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 476 vkknsclltmnnnestyFFSKTKYPIDKNgrkmtrpfmtighfehkavssyPYESDNTMLFPIFVLGLFTLFVGAIGIPF 555
Cdd:TIGR01974 434 -----------------FHGKERHEADAH----------------------PHESPLVMLLPLIVLAVGSVFAGFFIVPL 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 556 NQegvnldilskWLAPSINLLHPNSNNSMDWNEFLKDAVLSVSIAyfGIVIASFLYkpiyssLKNLEFINSFVKKGpkri 635
Cdd:TIGR01974 475 FE----------FLKGVLPTSAEPALEHHHVPALEIWSPTAVAIL--GILLAYLLY------LGNPTLPAKIAQRH---- 532
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463520 636 lwdkilNGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFF-DRRVIDGMTNGVGVISFIV 695
Cdd:TIGR01974 533 ------SGLYRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARLVGAI 587
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
440-677 |
1.74e-148 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 431.27 E-value: 1.74e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 440 RIYLLTFEGHLNIHFQNYGGKHKNPFYSISLWGKNG---VKKNSC---LLTMNNNESTYFFSKTKYPIDKNGRKMTRPFM 513
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGsklINKNFRtllLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 514 TIGHFEHKAVSSYPYESDNTMLFPIFVLGLFTLFVGAIGIPFNQEGVNLDILSKWLAPSINLLHPNSNNSMDWNEFLKDA 593
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 594 VLSVSIAYFGIVIASFLYKPIYSSLKNLEFINSFVKKGPKRILWDKILNGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFT 673
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 27463520 674 HFFD 677
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
55-466 |
3.83e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 353.93 E-value: 3.83e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 55 INSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVn 214
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 215 llfvTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITV 294
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 295 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMG 374
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 375 LMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IAWATAGLTAFYMFRIYLLTFEGHLNI 452
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 27463520 453 HFQNYGGKHKNPFY 466
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
38-446 |
2.31e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 351.69 E-value: 2.31e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 38 LLLSIVMIFSIYLSI-----QQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQG 112
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 113 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWIT 192
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 193 GSFEFRDLFEIFNNLIYNNevnllfVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 272
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 273 LPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 352
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 353 GSIIHSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IAWAT 430
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 27463520 431 AGLTAFYMFRIYLLTF 446
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
12-449 |
1.96e-92 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 299.17 E-value: 1.96e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 12 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFsIYLSiQQINSSSFYqyvWSWIINNDFSLDFGYLIDPLTSIMSIL 91
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL-IFLD-QGLETILTN---WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 92 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 171
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 172 VTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliynneVNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTP 251
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 252 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 331
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 332 RSALFHLITHAYSKALLFLGSGSIIHSMETIvgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDE 411
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGLNNE--------QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 27463520 412 IL---NDSWLYSPIFAIIAWATaGLTAFYMFRIYLLTFEGH 449
Cdd:MTH00211 389 ILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGY 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-432 |
1.74e-85 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 270.72 E-value: 1.74e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 133 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNE 212
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 213 VNLLFvtlcaLLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIG 290
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgysp 367
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463520 368 aKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAG 432
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
55-413 |
2.14e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 282.62 E-value: 2.14e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 55 INSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FEIFNNLI 208
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 209 YNNEVNLL----FVTLcALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMY 284
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 285 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMETiv 363
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 27463520 364 gyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-693 |
2.24e-83 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 275.64 E-value: 2.24e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIPFIPLpvpmlIGAGLILfPTATKSFRRMW----AFQSVLLLSIVMIFSIyLSIQQINSSSFYQYVWSWIINNDFSLD 76
Cdd:PRK07390 10 WLIPLYGL-----IGALLSL-PWSPGIIRRTGprpaAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADLDLS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 77 FGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:PRK07390 83 LSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 157 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliyNNEVNLLFVTLCALLLFAGAVAKSAQF 236
Cdd:PRK07390 163 WYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 237 PLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:PRK07390 239 PLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 317 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIhsMETIvgyspakSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:PRK07390 318 AYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII--LTTI-------TQDLTELGGLWSRMPATTLAFLVGSAG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFeghlnihfqnyGGKHKNpfysislwgkngv 476
Cdd:PRK07390 389 LVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF-----------LGKPQQ------------- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 477 kknsclltmnnnestyffsktkypidkngrkMTR--PfmtighfehkavssypyESDNTMLFPIFVLGLFTLFVgaigiP 554
Cdd:PRK07390 445 -------------------------------KTRrsP-----------------EVLWPMALPMVILAGFTLHL-----P 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 555 FnqegvnldILSKWlapsiNLLhpnsnnsMDWNEFLKDAVLSVSIA-YFGIVIASFLYkpiysslknlefinsfVKKGPK 633
Cdd:PRK07390 472 L--------LLQQW-----GLL-------PSWEALNLWAAPLLVASgLLGVLLGAWIY----------------LNKAWS 515
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 634 RILWdKILNGIYDWSYNRAYIDAFYTRFLVGGIRGLAEFTHFFDRRVIDGMTNGVGVISF 693
Cdd:PRK07390 516 RPIQ-LPLRFLQDLLAYDFYTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATL 574
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
36-446 |
6.53e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 272.23 E-value: 6.53e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 36 SVLLLSIVMIFSIYLSIQQINSSSFYqyvwsWIINNDFSLDFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAHDQ 111
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINISLSN-----WLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 112 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWI 191
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 192 TGSFefrDLFEIFnnLIYNNEVNLLFVTLCALLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 271
Cdd:MTH00208 216 FNSW---NLNEIL--SLNNSNSFLINILLFGILL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 272 LLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 351
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 352 SGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAII 426
Cdd:MTH00208 369 SGSIIHSLN--------NEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALI 440
|
410 420
....*....|....*....|
gi 27463520 427 AwatAGLTAFYMFRIYLLTF 446
Cdd:MTH00208 441 A---TLLTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
42-449 |
9.82e-82 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 270.88 E-value: 9.82e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 42 IVMIFSIYLSIQQINSSsfyqyvWSWIINNDFSLDFGYLIDPLtSIMSI---LITTVGIMVliYSDNYMAHDQGYLRFFA 118
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 119 YMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 198
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 199 DLFeifnnliYNNEVNllfvTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRV 278
Cdd:MTH00004 200 QLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 279 IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHS 358
Cdd:MTH00004 269 NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHN 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 359 MetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWATAgLTA 435
Cdd:MTH00004 349 L--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTA 419
|
410
....*....|....
gi 27463520 436 FYMFRIYLLTFEGH 449
Cdd:MTH00004 420 AYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
65-441 |
1.35e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 265.23 E-value: 1.35e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 65 WSWIINNDFSLDFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIY 140
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 141 IFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEvnllfvTL 220
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNS------TL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 221 CALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATL 300
Cdd:MTH00066 209 PLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 301 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMGLMGGLR 380
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27463520 381 KHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSPIFAIIAWATAgLTAFYMFRI 441
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLNSWALILTLIATS-FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-444 |
5.21e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 267.56 E-value: 5.21e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 65 WSWIinNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 144
Cdd:PRK12647 48 YAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 145 LVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEiFNNLIYNNEVNLLFVtlcaLL 224
Cdd:PRK12647 126 LTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHPLYLAIL----LL 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 225 LFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQ 304
Cdd:PRK12647 201 VLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 305 KDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRK 381
Cdd:PRK12647 281 TDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE---------TGTRDITKLGGLRR 351
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 27463520 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIAWATAGLTAFYMFRIYLL 444
Cdd:PRK12647 352 AMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-442 |
2.54e-78 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 256.61 E-value: 2.54e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 3 IPFIPLPVPMLIGAGLILFPtatKSFRRMWAFqSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIinndFSLDFGYLID 82
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 83 PLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPv 162
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 163 AANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliynNEVNLLFVTLCALLLFAGAVAKSAQFPLHVWL 242
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 243 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLF---RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQ 318
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 319 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTL 395
Cdd:COG0651 308 IGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 27463520 396 SLCGIPPLACFWSKDEILNDSW-LYSPIFAIIAWATAGLTAFYMFRIY 442
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
65-441 |
8.16e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 247.44 E-value: 8.16e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 65 WSWI------INNDFSLDFgYlidpltsimSILITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00137 70 WNWMntltfdINISFKFDH-Y---------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTAN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLllgILGFYWI---TGSFEFRDLFEIFNNLiynn 211
Cdd:MTH00137 140 NMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKDF---- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 212 evNLlfvTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGI 291
Cdd:MTH00137 213 --DL---TLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 292 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQ 371
Cdd:MTH00137 288 LTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLN--------DEQ 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463520 372 NMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYspifaiiAWATA------GLTAFYMFRI 441
Cdd:MTH00137 360 DIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLN-------AWALTltliatSFTAVYSLRV 431
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
2-449 |
2.30e-72 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 250.23 E-value: 2.30e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPMLIgaglilfPTATKSFRRMWAFQSVLLLSIVmIFSIYLS-IQQINSSSFYQYVWSWIINndFSLDFGYL 80
Cdd:PRK12645 6 IAILLPFIFALLI-------PFLYKYFKRIHTGWFVLPVPVV-LFIYFLSlIPTTMSGNTVMKTLPWIPS--LGINFTLY 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynneVNLLFVTLCALLLFAGAVAKSAQFPLH 239
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 240 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 320 GYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHV 383
Cdd:PRK12645 311 GLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIM 381
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463520 384 PITKITFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLYspIFAIIAWATAGLTAFYMFRIYLLTFEGH 449
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
31-449 |
2.04e-71 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 243.22 E-value: 2.04e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 31 MWAFQSVLLLSIVM-IFSIYLSIQQINSSSFY-QYV-----------------------------WSWIINNDFSLDFGY 79
Cdd:MTH00108 1 MNLFTSSTLLTLLIlTLPIIMTLTNPYKTNNYpLYVkttisyafiisliptmmfihsgqemiisnWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 80 LIDpLTSIMSI---LITTVGIMVliYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:MTH00108 81 KLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 157 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNLlfvTLCALLLfaGAVAKSAQF 236
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIF-----MLNPNNSNL---PLMGLLL--AATGKSAQF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:MTH00108 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 317 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:MTH00108 308 SQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLN--------DEQDIRKMGGLFKTLPFTSTALIIGSLA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463520 397 LCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWATAgLTAFYMFRIYLLTFEGH 449
Cdd:MTH00108 380 LTGMPFLTGFYSKDliiEAANTSYTNAWALLITLIATS-LTAAYSTRIIFFALLGQ 434
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-426 |
2.51e-71 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 239.88 E-value: 2.51e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 13 LIGAGLILFptatkSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNdfSLDFGYLIDPLTSIMSILI 92
Cdd:PRK06525 12 FIGALVVFF-----LPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD--VALFGLVIDPVSVLIGFVV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 93 TTVGIMVLIYSDNYMA-------HDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAAN 165
Cdd:PRK06525 85 VLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYnnevnLLFvtlcALLLFAgAVAKSAQFPLHVWLPDA 245
Cdd:PRK06525 164 SALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY-----LVF----LGILFA-AWGKSAQLPFYSWLPDA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 246 MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPY-IMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 324
Cdd:PRK06525 234 MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 325 ALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLC 398
Cdd:PRK06525 314 GLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
410 420
....*....|....*....|....*...
gi 27463520 399 GIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
19-448 |
5.00e-71 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 246.68 E-value: 5.00e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 19 ILFPTATKSFRRMWAFQSVLLLSIVmIFSIYLSIQQINSS-SFYQYVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGI 97
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLV-CFLYTLGLYPYTASgGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVG 177
Cdd:TIGR00940 90 LVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 178 DFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 257
Cdd:TIGR00940 170 GLAMLGGLILLGKITGSFSIDAVIASADAIR-----NSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 258 AATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------- 330
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 331 ---------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 402 PLACFWSKDEILN-------------DSWLYspIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:TIGR00940 396 PFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-440 |
1.33e-70 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 247.91 E-value: 1.33e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 63 YVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 141
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 142 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliyNNEVNLLFVTLC 221
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 222 ALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLA 301
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 302 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGG 378
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27463520 379 LRKHVPITKITFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAG--LTAFYMFR 440
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-440 |
4.94e-69 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 243.17 E-value: 4.94e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLpvpmlIGAgliLFPTATKSFRRM---WAFQSVLLLSIVMIFSIYlsiQQINSSSFYQYVWSWIinNDFSLDFG 78
Cdd:PRK12648 5 LLVLLPF-----LGA---LLAALLPRNARNaeaWLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWL--PALGLNLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK12648 72 LRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWH 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFefrDLFEIFNN--LIYNNEvnlLFVTlcALLLFA-GAVAKSAQ 235
Cdd:PRK12648 152 HRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLAAgdLIRAHP---LYPP--ALVLILlGAFTKSAQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 236 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK12648 224 FPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYST 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 316 MSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHsmETivgyspaKSQNMGLMGGLRKHVPITKITFLL 392
Cdd:PRK12648 304 ISHLGLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMV 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463520 393 GTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAG--LTAFYMFR 440
Cdd:PRK12648 375 AAAAMAGVPLLNGFLSKemffAETLDTHLLGSLDWLLPVAATLAgaFSVAYSLR 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-444 |
2.91e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 233.18 E-value: 2.91e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 75 LDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 154
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 155 GFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLF---EIFNNLiynNEVNLLFVTLcaLLLFAGAVA 231
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILqdsELIENI---KGHPLFLITL--ILIFIGAAA 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 232 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGL 311
Cdd:PRK12649 227 KSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 312 AYSTMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVP 384
Cdd:PRK12649 307 AYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHE---------AATRDIRKLGGLRKEMP 377
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 27463520 385 ITKITFLLGTLSLCGIPPLACFWSKDEILNDSW----LYSPIFAII--AWATAGLTAFYMFRIYLL 444
Cdd:PRK12649 378 ITFIVASIAALAMAGIPPLNGFLSKEMFYETSVemgaLIGGPFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
18-452 |
1.89e-65 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 231.18 E-value: 1.89e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 18 LILFPTATKSFRRMWAFQSVLLLSIVMIFSIYlSIQQINSSSFYQYVWSWIINNDFSLDFgyLIDPLTSIMSILITTVGI 97
Cdd:PRK12646 16 MILLTSKRRALAKYAGYIALVAPIISSIYFLI-QIPSVAKLQYLSTSIPWMKTLDINLDL--RLDGLSLMFSLIISLIGI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 98 MVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 176
Cdd:PRK12646 93 AVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 177 GDFGLLLGILGFYWITGSFEFRDLFEIFNNLiyNNEVNLLFVTLCALLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALI 256
Cdd:PRK12646 173 GGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL---GAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 257 HAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG------- 329
Cdd:PRK12646 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhq 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 330 ----------SYRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK12646 328 qdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE---------AGTRDIRILSGMRQLFPKMNLVMTIAALSMAG 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 27463520 400 IPPLACFWSKD----------EILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNI 452
Cdd:PRK12646 399 VPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDS 461
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
34-452 |
3.99e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 211.92 E-value: 3.99e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 34 FQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGFYWITG 193
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 194 SFEFrdlfEIFNNLIYNNEVNLLFVtlcaLLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:MTH00165 163 SWNF----IFYLDFMKNSFEMLLIG----LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 274 PLFrVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 353
Cdd:MTH00165 235 NLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 354 SIIHSMETivgyspakSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWAT 430
Cdd:MTH00165 314 SIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420
....*....|....*....|..
gi 27463520 431 aGLTAFYMFRIYLLTFEGHLNI 452
Cdd:MTH00165 386 -GLTVSYSFRLIYYSMSGDFNL 406
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
37-452 |
9.28e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 210.66 E-value: 9.28e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 37 VLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYWItGSFe 196
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWMLMH-GNW- 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 197 frdlfeifnNLIYNNEVNLLFVTLCALLLFAgAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 276
Cdd:MTH00209 163 ---------NIFYLNFNSNLGSVISVLIVLA-AMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 277 RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 356
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 357 HSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILnDSWLYSP---IFAIIAWATAGL 433
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNmpiMTLILMFLSTSL 383
|
410
....*....|....*....
gi 27463520 434 TAFYMFRIYLLTFEGHLNI 452
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNSS 402
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-451 |
4.18e-58 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 204.16 E-value: 4.18e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 1 WIIpFIPLpvpmlIGAGLILF-PTATKSFRRMWAFqsvLLLSIVMIFSIYLSIQQINSSSFYQYV--WSWIinNDFSLDF 77
Cdd:COG1008 8 LLI-LLPL-----LGALLLLLlPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVesYPWI--PSLGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 78 GYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 157
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 158 --FTRPVAANacqKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNLLFvtlcALLLFAGAVaKSAQ 235
Cdd:COG1008 155 ggERRIYAAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLF----LAFFIAFAV-KVPM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 236 FPLHVWLPDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFrviP----YIMYLISVIGIITVLLGATLALAQKDIKR 309
Cdd:COG1008 226 FPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKR 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 310 GLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMetivgyspaKSQNMGLMGGLRKHVPIT 386
Cdd:COG1008 302 LIAYSSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVL 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463520 387 KITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:COG1008 373 AALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
36-451 |
6.64e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 200.07 E-value: 6.64e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 36 SVLLLSIVMIFSIYLSIQQINSSSfyqYVWSWIINNDFSLDFGY--LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFvTNRVGDFGLLLGILGFYwITG 193
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV-LLG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 194 SFefrdlfeifnNLIYNNEVNLLFvtLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:MTH00151 163 HW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 274 PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 353
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 354 SIIHSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAIIAWAT 430
Cdd:MTH00151 311 SIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV 382
|
410 420
....*....|....*....|.
gi 27463520 431 aGLTAFYMFRIYLLTFEGHLN 451
Cdd:MTH00151 383 -GLTALYSARLSFCLVWGSMK 402
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
18-443 |
2.88e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 198.45 E-value: 2.88e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 18 LILFPTATKSFRRMWAFqsvlllsIVMIFSIYLSIQQINSSSFYQyvWSWIINNDFSLDFGYLIDPLTSIMSILITTVGI 97
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVG 177
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 178 DFGLLLGIlGF-----YWITGSFEFRDlfeiFNNLIynnevnllfvtlcALLLFAGAVAKSAQFPLHVWLPDAMEGPTPI 252
Cdd:MTH00207 151 DVMLLLSI-GWtlnqgHWSITNMWQTD----MNNYI-------------ALSIMIAAMTKSAQMPFSSWLPAAMAAPTPV 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 253 SALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 332
Cdd:MTH00207 213 SALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPK 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 333 SALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI 412
Cdd:MTH00207 293 LALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLI 364
|
410 420 430
....*....|....*....|....*....|....
gi 27463520 413 LNDSWLY---SPIFAIIAWATaGLTAFYMFRIYL 443
Cdd:MTH00207 365 LESSLFYphnSLMILMIFLAT-ALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
67-439 |
2.08e-53 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 198.34 E-value: 2.08e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 67 WI---INNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFW 143
Cdd:PRK12650 60 WIpdlLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAW 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 144 ELVGLCSYLLIGFwfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNevNLLFVTLCAL 223
Cdd:PRK12650 140 ELVSLASFFLIAR--SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAE--KPGLTTVVAV 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 224 LLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALA 303
Cdd:PRK12650 213 LIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 304 QKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLR 380
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ---------AGTRDIRRLGSLW 363
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27463520 381 KHVPITKITFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPIFAIIAW---ATAGLTAFYMF 439
Cdd:PRK12650 364 RRMPFTFVSVTIAALSMAAVPPLFGFVSKEGML-TAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-441 |
7.50e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 187.01 E-value: 7.50e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPmLIGAGLILFPTATKSFRRMWAFqsvlLLSIVMIFSIYLSIQQINSSSFYQYV---WSWIInndfslDFG 78
Cdd:PRK08375 4 HLLPLLVAVP-LLAAALIVLLPKRRRLRWALAL----LVAALTFALAISLLPQVLDGGVIAYVvggWPPGI------GIE 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 159 TRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliynnEVNLLFVTLcALLLFAGAVaKSAQFPL 238
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 239 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 314 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITF 390
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAF 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463520 391 LLGTLSLCGIPPLACFWSKDEIL---NDSWLYSPIFAIIawATAGLTAFYMFRI 441
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLL--ASSLLALLYFLRI 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-448 |
9.63e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 187.49 E-value: 9.63e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPMLIGAGLILfptaTKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSwiinnDFSLDFG--Y 79
Cdd:PRK12667 8 LTPILLVLFAFLLPLLSIL----LKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 80 LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEV----NLLFVTLCALLLFAGAVA-KSA 234
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKAA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 235 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFRVIPYIMYLISVIGIITVLLGATLALAQK 305
Cdd:PRK12667 239 IFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 306 DIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKH 382
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA---------AGTRDIDELAGLGRK 388
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27463520 383 VPITKITFLLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK12667 389 MPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-448 |
3.25e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 186.07 E-value: 3.25e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrdlfeiFNNLIYNNEVNLLFVTLCALLLFAGAVA-KSAQFPLH 239
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 240 VWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLFRV---IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYS 314
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYGPainLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 315 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGL 379
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGGL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463520 380 RKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
2-441 |
4.52e-44 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 164.90 E-value: 4.52e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQyvwswiinndfsldfGYLI 81
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLALGGGTGTAFGG---------------MFVV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 82 DPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:COG1007 69 DGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 161 PVAANACQKAFVTnrvGDFG---LLLGILGFYWITGSFefrDLFEIFNNLIYNNEVNLLFVTlcALLLFAGAVA-KSAQF 236
Cdd:COG1007 149 RRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLLL--GLVLVLAGLAfKLSAV 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 237 PLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:COG1007 221 PFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 314 STMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeTIVGYSPAKSQNMGLMGGLRKHVPITKITF 390
Cdd:COG1007 300 SSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAM 371
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463520 391 LLGTLSLCGIPPLACFWSKDEILNDSW---LYspIFAIIAWATAGLTAFYMFRI 441
Cdd:COG1007 372 TIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-441 |
2.06e-42 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 160.37 E-value: 2.06e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLpVPMLI---GAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQyvwswiinndfsldfG 78
Cdd:PRK05777 5 SLNLILL-LPELIllgAAVVLLLIDAFVRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGG---------------M 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAhDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 159 TRPVAANACQKAFVtnrVGDFG---LLLGILGFYWITGSFEFRDlfeIFNNLIYNNEVNLLFVTLCALLLfAGAVAKSAQ 235
Cdd:PRK05777 148 DRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAG---IAKALADGSGNSLLLLFGLVFLL-VGLAFKLSA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 236 FPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLA 312
Cdd:PRK05777 221 VPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLA 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 313 YSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMETIVGYspakSQNMGLMGGLRKHVPITKIT 389
Cdd:PRK05777 300 YSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGE----AESISDFAGLSKRSPLLAAV 371
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 27463520 390 FLLGTLSLCGIPPLACFWSKDEIL------NDSWLyspifAIIAWATAGLTAFYMFRI 441
Cdd:PRK05777 372 MTIFMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
2-356 |
3.79e-42 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 160.25 E-value: 3.79e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPlPVPMLIGAGLILF-PTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSfyqyvwSWIINndfsldfgyl 80
Cdd:PRK08168 5 VCALLP-AVLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV---------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 iDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfnnliYNNEVNLLFVTLCALLLFAGAVAKSAQFPLHV 240
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 241 WLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 27463520 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 356
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
81-448 |
3.75e-41 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 159.67 E-value: 3.75e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 IDPLTSIMSILITTVGIMVLIYSDNYM--AHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynNEVNL--LFVTLCALLLFAGAVAKSAQF 236
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLspFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 237 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFRVIP--YIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwWWGVLVLALGAISAVLGVLYALAEHDLKRLLAY 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 314 STMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGL 379
Cdd:PRK06521 307 STIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 380 RKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK06521 378 IRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
66-409 |
1.66e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 157.08 E-value: 1.66e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 66 SWIINNDFSLDFGYLIdpLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 145
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 146 VGLCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlFEIFNNLIynNEVNLLFVTLCALLL 225
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF---ADISQGLI--NDTSTGFALIVFLFL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 226 FAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---------LFRVIPYIMYLISVIGIIT 293
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtklfsefgTYRGVPLFNYILAWLGNIS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaks 370
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT--------- 353
|
330 340 350
....*....|....*....|....*....|....*....
gi 27463520 371 QNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-457 |
3.97e-40 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 153.94 E-value: 3.97e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 13 LIGAGLILFPTATKSFRRMWAFQSVLLLsiVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILI 92
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALA--TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 93 TTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKAFV 172
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 173 TNRVGDFGLLLGILGFYWITG-SFefrDLFEIFNNLIYNNEVNLLFvtlcaLLLFAGAVAKSAQFPLHVWLPDAM-EGPT 250
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLF-----LAFFIAFAVKVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 251 PISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 329
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 330 SYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACF 406
Cdd:TIGR01972 316 NELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 27463520 407 WSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNIHFQNY 457
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-451 |
5.38e-40 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 153.82 E-value: 5.38e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLpvpmlIGAGLILFptATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLI 81
Cdd:PRK05846 8 LLIFLPL-----IGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 82 DPLTSIMSILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FT 159
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 160 RPVAANacqKAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLFeifNNLIYNNEVNLLFVTLcallLFAGAVaKSAQ 235
Cdd:PRK05846 159 RIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFLAF----FIAFAV-KMPM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 236 FPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFRVIP-YIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 314 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITF 390
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVL---------YDRLHTRDIADYGGLAKVMPVLAAFF 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463520 391 LLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-441 |
2.05e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 143.42 E-value: 2.05e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 67 WIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHD--QGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE 144
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 145 LVGLCSYLLIGFWFTRPVAAnacqkafvtnrvgdfgLLLGILGFYWITGSFefrdLFEIFNNLIYNNEVNLLFV------ 218
Cdd:PRK06589 147 LLTISTAFLIGHTRNNISLS----------------GGYKYLKILMISALL----LFLPAVILIYTKTGNLDFVsgglfs 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 219 ---TLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLIS------VI 289
Cdd:PRK06589 207 knqSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefnwliFI 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 290 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmetivgYS 366
Cdd:PRK06589 287 PIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YS 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 367 PAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAWATAGLTAFYMFRI 441
Cdd:PRK06589 358 LKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-409 |
4.56e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 144.49 E-value: 4.56e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 12 MLIGAGLILFPTATK---SFRRMWAFQSVL-LLSIVMIFSIYLSIQQINSSSFYQYVWSWIInndfSLDFGYLIDPLTSI 87
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 88 MSILITTVGIMVLIYSDNYMAHDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAA 164
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 165 NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynnEVNLLFVTLCALLLFAGAVAKSAQFPLHVWLPD 244
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 245 AMEG-PTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMM 323
Cdd:PRK08667 231 AHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 324 LALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKIT 389
Cdd:PRK08667 311 MGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTSAL 381
|
410 420
....*....|....*....|
gi 27463520 390 FLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASE 401
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
34-446 |
1.40e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 138.51 E-value: 1.40e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 34 FQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFsldfgylidpLTSIMSILITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYF----------NSLLFSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrpvaANACQKA---FVTNRVGDFGLLLGILGFyw 190
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGF-- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 191 itgsfefrdlfeIFNNLIYNNEvnLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 270
Cdd:MTH00095 150 ------------IFSSYYFFSF--SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLM 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 271 RLLPLFRVIPYIMyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 350
Cdd:MTH00095 216 NFSYLILNMNVMK-IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFM 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 351 GSGSIIHSMetivgYSPAKSQNMGLMGGLRKHVpitKITFLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIAW 428
Cdd:MTH00095 295 QVGYLIHSN-----FGQQDGRNYSNNGNLPMFI---QLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFF 366
|
410
....*....|....*...
gi 27463520 429 ATAGLTAFYMFRIYLLTF 446
Cdd:MTH00095 367 FSVFLTFGYSYRLWKSFF 384
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-408 |
1.33e-32 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 131.98 E-value: 1.33e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPMLIGAGLILFPtatksFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFyqyvwswiinndFSLDFGYLI 81
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEI------------FAAGLWFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 82 DPLTSIMSILITTVGIMVLIYSDNYMAHDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 154 IGFWFTRpVAANACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFEIFNNLI-YNNEVNLLFVTLCALLLFAGAVA 231
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGFGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 232 KSAQFPLHVWLPDA-MEGPTPISALIhaatmvaAGIFLVARLLPLFRVipYIM-----------YLISVIGIITVLLGAT 299
Cdd:PRK06458 227 KVGLFPMHAWLPDAhSEAPSPVSALL-------SGVLLNVALYAVLRY--YILidaaigsdfpgRLLLIFGLLSVLVAAF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 300 LALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLM 376
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT---------RDINVI 368
|
410 420 430
....*....|....*....|....*....|..
gi 27463520 377 GGLRKHVPITKITFLLGTLSLCGIPPLACFWS 408
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-448 |
2.20e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 131.23 E-value: 2.20e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 11 PMLIGAGLILFPTATKSFRRMWAfqsvlLLSIVMIFSIYLSiqqinsssfyQYVWSWIINNDFSLDFgyLIDPLTSIMSI 90
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMA-----IVSAVYALGLVAS----------MVPLELTLLDNFGVTL--RADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 91 LITTVGIMVLIYSdnyMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKA 170
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 171 FVTNRVGDFgLLLGILGFYWITGSFEFRDLFEIfnnliynnevnllfVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPT 250
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 251 PISALIHAATMVAAGIFLVARLLPLfrvIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGs 330
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 331 yrsALFHLiTHAYSKALLFLGSGsIIHSmETIVGYspaKSQnmglMGGLRKHVPITkitflLGTLSLCGIPPLACFWSKD 410
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAG-ALPS-RNFTEL---ISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 27463520 411 EILndsWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-441 |
1.05e-31 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 128.91 E-value: 1.05e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPMLIGAGLILFPTATKSFRRMwAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLdfgyli 81
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 82 dpltSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 161
Cdd:TIGR01770 74 ----LIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 162 VAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNevNLLFvtLCALLLFAGAVAKSAQFPLHVW 241
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLL--LGIVLILVGLLFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 242 LPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:TIGR01770 226 VPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 320 GYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSIIHSMETivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:TIGR01770 306 GYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFS 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 27463520 397 LCGIPPLACFWSKDEIL-----NDSWLYSPIFAIiawaTAGLTAFYMFRI 441
Cdd:TIGR01770 379 LAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRV 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
129-448 |
9.09e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 126.80 E-value: 9.09e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 129 GLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNli 208
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 209 ynneVNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFRVIP---YIMY 284
Cdd:PRK08377 200 ----IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 285 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmet 361
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGIT--- 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 362 ivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL--NDSWLYSPIFAIIAWATAGLTAFYMF 439
Cdd:PRK08377 352 ------LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIlaGLSAGYTWPVALVLGASVVEAVYYFR 425
|
....*....
gi 27463520 440 RIYLLTFEG 448
Cdd:PRK08377 426 LIHTMWFKG 434
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-448 |
3.94e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 124.68 E-value: 3.94e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 6 IPLPVPMLIGAGLILFPTATKSFRrmwaFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWiiNNDFSLDFgyLIDPLT 85
Cdd:PRK07691 8 LPILIPVITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 86 SIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAAN 165
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFVTLCALLLFAgavAKSAQFPLHVWLPDA 245
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAILFLFVFA---TKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 246 MEGP-TPISALIhAATMVAAGIFLVARLLPLFRV--IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 322
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 323 MLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 27463520 400 IPPLACFWSKDEILNDSWLY-SPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
81-378 |
5.61e-30 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 124.38 E-value: 5.61e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeifNNLIYNNEVNL--LFVTLCALLLFAGAVAKSAQF 236
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFR-VIPYIMYLIsvIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 27463520 316 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtIVGYSPAKSQNMGLMGG 378
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
2-409 |
4.12e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 119.61 E-value: 4.12e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 2 IIPFIPLPVPMLIGAGLILFPtatksFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYqyvwswiinnDFSLDFgYLI 81
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFL-----PGRARKALLLLAPVLAVLAVLTVPEGTYLTVTFL----------GFDLVL-GRV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 82 DPLTSIMSILITTVGIMVLIYSdnymAHDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGLCSYLLIgfWFTR- 160
Cdd:PRK12668 66 DKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARGt 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNnliynnevnllfvTLCALLLFAGAVAKSAQFPLHV 240
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLHA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 241 WLPDAMEGPTpisalihaatmVAAGIFLVA-----RLLPLFRVIPYIMYLIsVIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK12668 205 WLPDAYPEAT-----------VTGSVFLSAfttktAVYALARAFPGTELLI-YIGAAMAVYGVFFALLENDLRRLLSYHI 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 316 MSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSpaksqnmglMGGLRKHVPITKITFLL 392
Cdd:PRK12668 273 VSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTE---------LGGLYRSMPLTALFCLV 343
|
410
....*....|....*..
gi 27463520 393 GTLSLCGIPPLACFWSK 409
Cdd:PRK12668 344 GALSISAFPLFSGFVSK 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
3-446 |
5.67e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 115.43 E-value: 5.67e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 3 IPFIPLPVPMLIGAGLILFptatKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINsssfyqyvwswiiNNDFSLDFG---- 78
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQR-------------HGPITLDFGgwlp 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 -----YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK12663 68 pfgiqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 154 IGFWFTRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnllfVTLCALLLFAGAVaKS 233
Cdd:PRK12663 148 ITLGQER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 234 AQFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFRVIPYIMY-LISVIGIITVLLGATLALAQKDIKRG 310
Cdd:PRK12663 222 ALFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRI 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 311 LAYSTMSQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITK 387
Cdd:PRK12663 300 AGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFG 370
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27463520 388 ITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIAWATAGLTAFYMFRIYLLTF 446
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
36-356 |
7.70e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 111.89 E-value: 7.70e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 36 SVLLLSIVMIFSIYLSIqqiNSSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLR 115
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLF---LVGVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLgILGFYWITGSf 195
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGS- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 196 efrdlfeifnnliynnevNLLFVTLCALLLFAgavAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00063 155 ------------------GSFLCCLFFFLIVF---TKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 276 FRVIPYImYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 355
Cdd:MTH00063 214 LGFSWLS-IFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 27463520 356 I 356
Cdd:MTH00063 293 M 293
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-457 |
9.53e-23 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 102.48 E-value: 9.53e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 13 LIGAGLI-LFPTATKSFRrmWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIDPLtSIMSIL 91
Cdd:PRK07363 10 ILGAIIIgFFPGNLPSAR--LRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL-SLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 92 ITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAF 171
Cdd:PRK07363 87 LNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 172 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLfvtlcaLLLFAGAVAKSAQFPLHVWLPDAMEGPTP 251
Cdd:PRK07363 164 IYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 252 ISALIHAATMVAAGIFLVARL-LPLFrviPYIMYLIS----VIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 326
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 327 GMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmETIVGYSPAKSQNmGLMGGLRKhVPITKITFLLGTLSLCGIPPL 403
Cdd:PRK07363 315 AAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLN-GLMNPIRG-LPLTSALLVLAGMASAGIPGL 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463520 404 ACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNIHFQNY 457
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-441 |
9.64e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 102.12 E-value: 9.64e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 29 RRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDfgylIDPLTSIMSILITTVGIMVLIYS---DN 105
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATMLVLVNFIAVMSVLYGiypNR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 106 YMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGI 185
Cdd:PRK12662 102 KEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGI 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 186 LGFYWITGSFEFRDLFEIFNNLIYNNEVNLlfvtlCALLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAA 264
Cdd:PRK12662 181 GFLYAITGTLNMGDMFLIIQDLPTNRAIQI-----GVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKV 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 265 GIFLVARLL------PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SAL 335
Cdd:PRK12662 255 MIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAV 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 336 FHLITHAYSKALLFLGSGSIIHSMETIvgyspaksqNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILND 415
Cdd:PRK12662 335 AYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
410 420
....*....|....*....|....*..
gi 27463520 416 SWLYSPIFAIIAWAT-AGLTAFYMFRI 441
Cdd:PRK12662 406 FIKSNAWIGLVVLLVgSGLSVIYVWKI 432
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-456 |
3.36e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 94.38 E-value: 3.36e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 13 LIGAGLILFPTATKSFRRMWAFqSVLLLSIVMIFSIYLSIQQINSSSFYQYVWS--WIinNDFSLDFGYLIDPLtSIMSI 90
Cdd:PRK06473 10 LLGAILIGFWPSGINGKLARSV-ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFipWI--DSLGLSYHLGVDGL-SLPLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 91 LITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKA 170
Cdd:PRK06473 86 VLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 171 FVTNRVGDFGLLLGILGFYWITGSFEFRdlfeiFNNLIYNN-EVNLLFVTLCALLLfaGAVAKSAQFPLHVWLPDA-MEG 248
Cdd:PRK06473 163 LLYTAISGILILVSFLGLVWLSGASSFD-----YEPLRSHTlPLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 249 PTPISALIhAATMVAAGIFLVARL-LPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 326
Cdd:PRK06473 236 STPVSVLL-AGVLLKLGTYGLLRFgVGLFpEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 327 GMG---SYRSALFHLITHAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGL---RKHVPITKITFLLGTLSLCGI 400
Cdd:PRK06473 315 AAAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463520 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNIHFQN 456
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
37-457 |
8.02e-20 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 93.14 E-value: 8.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 37 VLLLSIVMIFSIYLSIQQINSSSFYQY------------VWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSD 104
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPWLYFIsstslvmsitalLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 105 NYMAHDQGYLRFFayMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFwFTRPVAANACQKAFvtnrvgdfgL 181
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------L 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 182 LLG-----IL--GFYWITG-SFEFRDLFEIFNNLIYNNEVNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEG-PTPI 252
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 253 SALIhAATMVAAGIFLVARLLPLfrVIPYIM----YLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 328
Cdd:CHL00049 249 VAFL-SVTSKVAASALATRIFDI--PFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 329 GSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGyspakSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWS 408
Cdd:CHL00049 326 GDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 27463520 409 KDEILNDSW---LYSPIFaiIAWATAGLTAFYMFRIYLLTFEGH---LNIHFQNY 457
Cdd:CHL00049 401 KLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNY 453
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
219-446 |
3.21e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.57 E-value: 3.21e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 219 TLCALLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLG 297
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 298 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMG 374
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLIERQ---------AGSSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463520 375 LMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLyspIFAIIAWA--TAGLTAFYMFRIYLLTF 446
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-438 |
5.55e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.50 E-value: 5.55e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 YLIDPLtSIMSILITTVG-IMVLIYSDNYMAH-------DQGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWEL 145
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 146 VGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLlGILGFYWIT------GSFEFRDLfeifnnLIYNNEVNLLFVT 219
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLG 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 220 LCALLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFR---VIPYIMYLISVIGIITVL 295
Cdd:PRK08676 207 ASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 296 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMetivgyspAKSQN 372
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDR 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463520 373 MGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDS-----WLYSPIFAIIAWATAGLTAFYM 438
Cdd:PRK08676 357 FDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
131-448 |
6.81e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 87.58 E-value: 6.81e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 131 VTSSNLIQIYIFWELVGLCSYLLIGfwftrpvaanaCQKA----FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNN 206
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 207 LIYNNEVNLLFVTLCALLlfAGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFRVIp 280
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLL--AGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 281 yimyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 346
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 347 LLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI------LNDSWLY- 419
Cdd:PRK08042 323 VLFLGAGSVWFR---------TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 27463520 420 ----SPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
116-445 |
1.28e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 86.24 E-value: 1.28e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 194 SFEFrDLFEifnnlIYNNEVNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLVARL 272
Cdd:PRK12561 166 TFTF-DLAE-----LGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKMGG 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 273 LPLFR----VIP----YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLI 339
Cdd:PRK12561 233 YALIRfnvqMLPdahvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 340 THAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDS 416
Cdd:PRK12561 311 SHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSS 381
|
330 340 350
....*....|....*....|....*....|.
gi 27463520 417 WLYSPIFAIIawaTAGLTA--FYMFRIYLLT 445
Cdd:PRK12561 382 DVYSSTFRTI---TILLAAvgLILTPIYLLS 409
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
79-409 |
1.46e-17 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 86.24 E-value: 1.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGLCSyllIGFWF 158
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 159 TRPVAaNACQKAFVTNRVGDFG---LLLGILGFYWITGSFEFRDLfeifNNLIYNNEVNLLFVTLCALLLFaGAVAKSAQ 235
Cdd:PRK06277 142 ASGTE-EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 236 FPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGL 311
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 312 AYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKI 388
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 27463520 389 TFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
126-409 |
2.95e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 83.93 E-value: 2.95e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 126 SMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFN 205
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 206 NLIYNNEVnllFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFRVIPYIMY 284
Cdd:MTH00196 85 SGQSFSSV---SVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 285 LIsVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMET 361
Cdd:MTH00196 155 LL-IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFSIILALNVYKNL 233
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 27463520 362 IVGYSpaksqnmglmgGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:MTH00196 234 IIEFS-----------GLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
35-413 |
3.31e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 84.68 E-value: 3.31e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 35 QSVLLLSIVMIFsIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYLIdpltsIMSILITTVGIMVLIYSDNYMAHDQGYL 114
Cdd:MTH00199 24 LSTLKLSIGVLL-LIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 115 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 194
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 195 FEFRDlfeifNNLIYNNEVNLLFVTLCalLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarll 273
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVFSI---- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 274 pLFRVIPyIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIThayskallflgsg 353
Cdd:MTH00199 240 -LVQIGP-VTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIY------------- 304
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463520 354 SIIHSMETIVGYSPAKSQNMGL-----MGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00199 305 MIIYVIMSICSFSIILSLKLTKgliveVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
119-409 |
1.68e-16 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 82.79 E-value: 1.68e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 119 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:PRK02504 112 FAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 196 EfrDLFEIFNNLIynneVNLLFVTLCALLLFAGAVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLL 273
Cdd:PRK02504 192 T--QLSAIALALI----TSPSLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 274 PLfrVIPYI----MYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayska 346
Cdd:PRK02504 265 VT--AFPSFdeqwKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY----- 337
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463520 347 lLFLGSGS----IIHSMET----IVGYSpaksqnmglmgGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK02504 338 -LFMNLGAfacvILFSLRTgtdqISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
3.81e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 69.76 E-value: 3.81e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 27463520 67 WIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
140-349 |
5.00e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 65.50 E-value: 5.00e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 140 YIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGIL--GFYWITGSFEFRDLfeifnnliYNNEVNL 215
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTAL--------AAKDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 216 LFVTLC-ALLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLVARLLPLFR----VIP----YIMYLI 286
Cdd:PRK02546 210 GFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKMGGYALLRmnagMLPdahaQFAPLL 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27463520 287 SVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLF 349
Cdd:PRK02546 283 IVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLF 348
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
216-441 |
6.40e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 65.65 E-value: 6.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 216 LFVTLCALLLFAGAvaksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfrvipyIMYLISVIGIITV 294
Cdd:MTH00198 303 LFITVAILFKLAAA-------PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIISL 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 295 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMG 374
Cdd:MTH00198 368 VVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDG 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 375 LMGG---LRKHVPIT-------KITFLLGT--LSLCGIPPLACFWSKDEILNDS----WLYS-PIF---AIIAWATAGLT 434
Cdd:MTH00198 447 SFGNynlVRRLVDLTilsrgqpYIAFSLAIvfLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCIS 526
|
....*..
gi 27463520 435 AFYMFRI 441
Cdd:MTH00198 527 AFYYIRI 533
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
86-403 |
7.29e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 65.20 E-value: 7.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 86 SIMSILITTVGIMVLIYSDNYmAHDQGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWftrpvaAN 165
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 166 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFRDLFEIfnnliynneVNLLFVTLcalllfaGAVAKSAQFPLHV-- 240
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFSYLPSP---------VPLILASF-------GFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP--YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQ 318
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 319 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSIihSMETIvGYSPAKSQNMGLMGGlrkhvpi 385
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330
....*....|....*...
gi 27463520 386 tkitfLLGTLSLCGIPPL 403
Cdd:PRK06459 332 -----TLLASSLSGLLPN 344
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
135-439 |
1.08e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 64.56 E-value: 1.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfNNLIYNNEVN 214
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 215 LLFvtlcaLLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRV-IPYIMYLISVIGII 292
Cdd:MTH00226 231 WIF-----LGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 293 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsMETIVgYSPAK 369
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 370 SQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMF 439
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
66-401 |
8.59e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 61.62 E-value: 8.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 66 SWIINNDFSLDFGYLIDPLTSI------MSILITTVGIMVLIYSDNYMAHDqgylrFFAYMSFFSTSMLGLVTSSNLIQI 139
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKE-----FLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 140 YIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfnNLIYNNEVNLLfvt 219
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI--KLPLSIQKWLL--- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 220 lcaLLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP-YIMYLISVIGIITVLLG 297
Cdd:MTH00204 213 ---VGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 298 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSIIHSMET-IVGYspaksqnm 373
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTrLIKY-------- 361
|
330 340
....*....|....*....|....*...
gi 27463520 374 glMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:MTH00204 362 --YRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
12-456 |
2.40e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.95 E-value: 2.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 12 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSFYQyvwswiinndfsldFGYLIDPLTSIMSIL 91
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 92 ITTVGIMVLIYSDNYMaHDQGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQ 168
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 169 KAFVTNRVGDFGLLLGILGFYWITGSFefrdLFEIFNNLIYNNEVNLLFVTLCALllfaGAVAKSAQFPLHVWLPDA-ME 247
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSL----SLYILYFSKLTTWNNNLWWLACIL----AFLVKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 248 GPTpisalihAATMVAAGIFL------VARLLPLFRVIPYIM-YLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSsYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 321 YMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNIHFQN 456
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLS 421
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
216-437 |
1.07e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 58.32 E-value: 1.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 216 LFVTLCALLLFAGAVaKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLFR----------VIPYIMY 284
Cdd:PRK12666 208 LLEAGAALLLVVFLI-KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFgpeagasagfGQDWLLP 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 285 LisviGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL----------- 350
Cdd:PRK12666 285 G----GLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrga 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 351 GSGSIIHSMETivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN---------DSWLY-- 419
Cdd:PRK12666 361 AADRLAVTPEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwa 437
|
250 260
....*....|....*....|..
gi 27463520 420 ----SPIFAIIAWATAGLTAFY 437
Cdd:PRK12666 438 lvllSGLAALIALTRAGIRLFW 459
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
214-445 |
1.83e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 56.82 E-value: 1.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 214 NLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMylisVIGIIT 293
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27463520 374 GLMGGLrkhvpitkitfllgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTA--FYMFRIYLLT 445
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF 293
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
87-345 |
2.21e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.98 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 87 IMSILITTVGIMVLIYSDNYMAHDqgylrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANA 166
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 167 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnNLIYNNEV-NLLFvtlcaLLLFAGAVAKSAQFPLHVWLPDA 245
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----CLKIEKELqYFIF-----LGFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 246 -MEGPTPISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG--- 320
Cdd:MTH00217 233 hVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvt 312
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 27463520 321 ---------------YMMLALGMGSyrSALFHLITHAYSK 345
Cdd:MTH00217 313 lgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
219-415 |
3.16e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 55.98 E-value: 3.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 219 TLCALLLFAGAVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfrvipyiMYLISVIGIITVL 295
Cdd:MTH00112 93 TSCTLLTLALAM-KLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN--------PTLLLTLAILSTL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 296 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMETivgyspAKSQNMGL 375
Cdd:MTH00112 164 IGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMT 232
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 27463520 376 MgglRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILND 415
Cdd:MTH00112 233 S---WTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
80-453 |
3.36e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 56.46 E-value: 3.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 80 LIDPLTSIMSILITTVGIMVLIYSDNYMA-----HDQGYLrffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 154
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 155 GFWFTRPVAANACQK-AFVTnRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNLLFVTLCaLLLFagaVAKS 233
Cdd:MTH00068 134 TRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAF---MVKM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 234 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFR-VIPYIMYLISVIGIITVLLGATLALAQK 305
Cdd:MTH00068 208 PLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLTpLSKELSYPFIILALWGVLMTSLICLRQT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 306 DIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSGSiihsmetivgYSPAKSQNMGLMGGLRK 381
Cdd:MTH00068 281 DLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRGAQT 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27463520 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNIH 453
Cdd:MTH00068 351 ILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
128-397 |
6.74e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 55.72 E-value: 6.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 128 LGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTnRVGDFGLLLGIL--GFYwitGSFEFRDLFEIFN 205
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 206 NLIYNNEVNLLFVtLCALLLFAgavAKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVARLLPLFRV----IP 280
Cdd:CHL00011 202 NQSYPVALEILFY-IGFLIAYA---VKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRInmelLP 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 281 YIMYLIS----VIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLFLG 351
Cdd:CHL00011 271 HAHSIFSpwlvIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFFL 348
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 27463520 352 SGSIIHSMETIVgyspaksqnMGLMGGLRkhVPITKITFLLGTLSL 397
Cdd:CHL00011 349 AGTSYDRIRLVY---------LDEMGGIA--IPMPKIFTMFSSFSM 383
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
38-436 |
6.86e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 55.52 E-value: 6.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 38 LLLSIVMIFSIYLSIQQINSSSFYQYVWSWIINNDFSLDFGYL-IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFE 196
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 197 FrdlfeifnnLIYNNEVNLLFVT-LCALLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------ 268
Cdd:MTH00014 173 M---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggyg 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 269 VARLLPLFrviPYIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITH 341
Cdd:MTH00014 237 LLRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 342 AYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK----DEILNDSW 417
Cdd:MTH00014 314 GLCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSL 384
|
410
....*....|....*....
gi 27463520 418 LYSPIFAIIAWATAGLTAF 436
Cdd:MTH00014 385 STAILLAITSFLAAAYSLF 403
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
116-425 |
1.12e-07 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 54.55 E-value: 1.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 196 EFrdlfeifnnLIYNNEVNLLFVTLcALLLfagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPL 275
Cdd:MTH00041 85 SI---------NGPLNTLSSIIITL-ALAL------KLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 276 FRVIPYI-MYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSgs 354
Cdd:MTH00041 143 ISISNLLnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN-- 220
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 27463520 355 iIHSMETIvgyspaksqnmGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK-----DEILNDSWLYSPIFAI 425
Cdd:MTH00041 221 -NFSLSTL-----------SHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
119-439 |
1.97e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.43 E-value: 1.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 119 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 196 EFRDLFEIFNnliynnevnlLFVTLCALLLfagavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00200 85 GISEMLGPLS----------ETLILLALAL------KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 276 FRVIpyimyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsi 355
Cdd:MTH00200 149 LNSN-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 356 ihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTA 435
Cdd:MTH00200 219 ---------LNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLS 289
|
....
gi 27463520 436 FYMF 439
Cdd:MTH00200 290 LFFY 293
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
114-456 |
3.62e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 53.04 E-value: 3.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 114 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 194 SFEFRDLfEIFNNLIYNNEVNLLFVTLCaLLLFagaVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGC-LLAF---LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 274 ----PLFRVIPYIMYLISVIGIItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKA 346
Cdd:MTH00127 249 vmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 347 LLFLGSGSiihsmetivGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:MTH00127 326 ALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|
gi 27463520 427 AWATAGLTAFYMFRIYLLTFEGHLNIHFQN 456
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-324 |
7.79e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 52.09 E-value: 7.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 79 YLIDPLTSIMSILITTVGIMVLIYSDN--------YMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCS 150
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 151 YLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliyNNEVNLLFVTLCALLLFAGAV 230
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 231 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFRVIPY------IMYLISVIGIITVLLGATLALAQ 304
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 27463520 305 KDIKRGLAYSTMSQLGYMML 324
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
60-448 |
4.71e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 49.45 E-value: 4.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 60 FYQYVWSWIINNDFsldfgYLIDPLTSIMSILITTVGIMVLIYSdnymahdQGYLRFFAYMSFFSTSMLGLV-------T 132
Cdd:MTH00150 6 LYSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafS 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 133 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfeIFNNLIYNNE 212
Cdd:MTH00150 74 VSSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 213 VNLLFVTLCALLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFRVIPYIMY- 284
Cdd:MTH00150 149 SSMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSi 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 285 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAY-SKALLFLGSGSiihsme 360
Cdd:MTH00150 219 FLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT------ 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 361 tivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFR 440
Cdd:MTH00150 293 ----YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLY 368
|
....*...
gi 27463520 441 IYLLTFEG 448
Cdd:MTH00150 369 LYTSIQHG 376
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
214-470 |
7.83e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 48.52 E-value: 7.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 214 NLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFrvipyimYLISVIGIIT 293
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 374 glmgglrkhvpitkITFLLGTLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIAWATAgLTAFYMFRIYLLTFeghLN 451
Cdd:MTH00197 227 --------------VFLGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSLYYYLSLAYKSL---IL 288
|
250
....*....|....*....
gi 27463520 452 IHFQNYGGKHKNPFYSISL 470
Cdd:MTH00197 289 SNWMINFLMKINLLYSGLF 307
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-426 |
1.03e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.57 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 213 VNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIflvarLLPLFRVIPYIMYLisviG 290
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALV-----LLLFFSGEEILLFL----G 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMETIvgy 365
Cdd:PRK12664 209 IITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF--- 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463520 366 spaksqNMGLMGGLRKhVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK12664 286 ------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
34-343 |
2.72e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 47.28 E-value: 2.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 34 FQSVLLLSIVMIFSIYLSIQQINSSSFYqyvwSWIInndfsldFGYLIDPLTSIMSILITTVGIMVLIYSDNYMahdqgY 113
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMT----SFIS-------SSFSFDSLSLPLIMLSFWISLLMVLASYKVF-----K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 114 LRFFAYMSFFSTSMLGLVT-----SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGF 188
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 189 YWITGSFEFRDLFEIFNNLIYNNevnllfvTLCALLLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIF 267
Cdd:MTH00205 163 NSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 268 LVA---RLLPLFRVIPYIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----M 322
Cdd:MTH00205 228 LKLggyGLIRITSMLYKLNSNFSELFFSISLWGGVMTgmicLRQVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiM 307
|
330 340
....*....|....*....|.
gi 27463520 323 MLALGMGSyrSALFHLITHAY 343
Cdd:MTH00205 308 MVAHGLCS--SGMFALANVNY 326
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
222-414 |
1.28e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 41.69 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 222 ALLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfrvipYIMYLISVIGIITVLLGATLA 301
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 302 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMETIVGYSPAKSQNMglMGGLRK 381
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190
....*....|....*....|....*....|...
gi 27463520 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
34-356 |
1.56e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 41.68 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 34 FQSVLLLSIVMIFSIYLSIQQIN-SSSFYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQG 112
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLfLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 113 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWIT 192
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 193 GSFefrdlfeIFNNLIYNNEVNLLFVTLcalLLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVAR 271
Cdd:MTH00163 166 GSL-------SFFLLNFFGSLNFLWYLS---MILAFLV-KMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 272 LLPLFRVIPYIMYLISVIGIITV---LLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----MMLAL 326
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWIsisLVGGVIVslicLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIGH 307
|
330 340 350
....*....|....*....|....*....|
gi 27463520 327 GMGSyrSALFHLITHAYSKallfLGSGSII 356
Cdd:MTH00163 308 GLCS--SGLFCLANIIYER----LGSRSLL 331
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
237-413 |
5.94e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 5.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 237 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfrvipyimYLISVIGIITVLLGATLALAQKDIKRGL 311
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS--------NLLIIMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 312 AYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMETivgyspaksqNMGLMGGLRKHVPITKITFL 391
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLNST----------NINKLSSSWSKNPTLTSMMM 245
|
170 180
....*....|....*....|..
gi 27463520 392 LGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
36-445 |
6.66e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 39.57 E-value: 6.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 36 SVLLLSIVMIFSIYLSIQQ------INSSSFYQYVWSWIINNDFSLDFGYL-----IDPLTSIMSILITTVGIMVLIYSD 104
Cdd:MTH00044 3 TLILLSLGIAITSWIVPKNklwpisISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 105 NYMAHDQGYLR--FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLL 182
Cdd:MTH00044 83 NHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 183 LGILGFYWITGSfefrdLFEIFNNLIYNNEVNLLFVTLCALLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATM 261
Cdd:MTH00044 163 ISLIAIYSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 262 VAAGIFLVARLLPLFRVIpyIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---A 334
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGingA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 335 LFHLITHAYSKALLFlgsgsiihSMETIVgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00044 315 LILMIAHGLVSSALF--------CLANIL-YERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIIS 385
|
410 420 430
....*....|....*....|....*....|.
gi 27463520 415 DSWLYSPIFAIIAWATAGLTAFYMFRIYLLT 445
Cdd:MTH00044 386 SIISWSILSFPIIGLATVFGAIYSLLIYQLT 416
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
200-414 |
8.80e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.04 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 200 LFEIFNNLIYNNEVNLLFVTLCALLLFAgavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFrVI 279
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLLL----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLI-LL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463520 280 PYIMY--LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiih 357
Cdd:MTH00160 138 SYLINnnFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI------- 207
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 27463520 358 smetIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00160 208 ----ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQ 260
|
|
| |
