|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-694 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1428.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYL 80
Cdd:CHL00025 9 WIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINNDFSLEFGYL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:CHL00025 89 IDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHV 240
Cdd:CHL00025 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:CHL00025 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGI 400
Cdd:CHL00025 329 YMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNYGGKHKTPFYSISLWGKNG---VK 477
Cdd:CHL00025 409 PPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWGKEEskkIN 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 478 KNSCLLTMNNNESTYFLSKTKYPIDKNGRKMTRPFMTiaHFEHKAVSSYPYESDNTMLFPIFVLGLFTLFVGAIGIPFNQ 557
Cdd:CHL00025 489 KLLLLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFIT--IFGNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQ 566
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 558 EGVNLDILSKWLAPSINLLHPKSNNSQDWNEFLKDAVVSVSIAYFGIFIASFLYKPIYSSLKNLEFINSFVKKGPKRILW 637
Cdd:CHL00025 567 EGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSFVKGGPKRIFL 646
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 27463486 638 DKIINGIYDWSYNRAYIDAFYTRFFVGGIRGLAEFTHFFDRRVIDGMTNGVGVISFI 694
Cdd:CHL00025 647 DKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFF 703
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-692 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 700.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYL 80
Cdd:PRK07376 9 WLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGDFHLPMGYV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK07376 89 IDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHV 240
Cdd:PRK07376 169 KGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAKSAQFPLHV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK07376 249 WLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGI 400
Cdd:PRK07376 329 YMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGI 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkhktpfysiSLWGKNGVKKNS 480
Cdd:PRK07376 409 PPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG--------------------EFRGNDKELQKE 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 481 CLLTMNNNESTYFLSKtkypidkngrkmtrpfmtiAHFEHKAVSSYPYESDNTMLFPIFVLGLFTLFVGAIGIPFNQEGV 560
Cdd:PRK07376 469 LLAAADAPGHHEGHHE-------------------EHGEHHHHSGSPHESPWTMTLPLVVLAVPSVLIGLLGTPWNNRFE 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 561 NLdilskWLAPSINLLHPKSNnsqDWNEFLKDAVVSVSIAYFGIFIASFLYkpiyssLKNLEFINSFVKKGPKrilwdki 640
Cdd:PRK07376 530 AF-----LHAPGEALEAAAHF---EWGEFLILAGASVGIALIGITLASLMY------LLKKIDPAAIAERFPP------- 588
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|..
gi 27463486 641 ingIYDWSYNRAYIDAFYTRFFVGGIRGLAEFTHFFDRRVIDGMTNGVGVIS 692
Cdd:PRK07376 589 ---LYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVT 637
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-692 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 567.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIPFIPLpvpmligAGLILFPTATKSFRRMWAFQ-SVLLLSIVMIFSIYLsIQQINSSSVYQYVWSWIINNDFSLDFGY 79
Cdd:COG1009 5 WLIPLLPL-------LGALLAGLLGRRLGRRAAGWlAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGLDFGF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 80 LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:COG1009 77 RLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIynnevNFLFVTLCAVLLFAGAVAKSAQFPLH 239
Cdd:COG1009 157 KPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 240 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:COG1009 232 FWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 320 GYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:COG1009 312 GYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 400 IPPLACFWSKDEILNDSW---LYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkhktpfysislwgkngv 476
Cdd:COG1009 383 IPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG---------------------------- 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 477 kknsclltmnnnestyflsktkypidkngrkmTRPFMTIAHfehkavssyPYESDNTMLFPIFVLGLFTLFVGAIGIPFn 556
Cdd:COG1009 435 --------------------------------KPRPKTPKH---------PHESPWLMTLPLVVLAVLSLVLGLLLPGL- 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 557 qegvnldiLSKWLAPSiNLLHPKSNNSQDWneFLKDAVVSVSIAyfGIFIASFLYkpiysslknlefinsfvKKGPKRIL 636
Cdd:COG1009 473 --------LEGLLAPA-AVLGGELHLAHGL--LLNALPLLLSLL--GIALGYLLY-----------------LKRPLPAL 522
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463486 637 WDKiINGIYDWSYNRAYIDAFYTRFFVGGIRGLAEFThFFDRRVIDGMTNGVGVIS 692
Cdd:COG1009 523 AER-LKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLT 576
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-691 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 560.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIPFIPLpvpmlIGAGLILFptatksFRRMW-----AFQSVLLLSIVMIFSIYLSIQQINSS--SVYQYVWSWIINNDF 73
Cdd:PRK06590 6 WLIVLLPL-----IGALILGL------FGRRIgekwaHLVGTGLVGLSALLSLVVFFDFLLGGgrAFSQTLWTWISVGDF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 74 SLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK06590 75 DVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 154 IGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKS 233
Cdd:PRK06590 155 IGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFIGAMGKS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 234 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 314 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLG 393
Cdd:PRK06590 312 STMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYATFLIG 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 394 TLSLCGIPPLACFWSKDEILNDSWLYSPIFA-IIAWATAGLTAFYMFRIYLLTFEghlnvhfqnygGKHKtpfysislwg 472
Cdd:PRK06590 384 TLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFH-----------GKEK---------- 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 473 kngvkknsclltmnnnestyflsktkypidkngrkmtrpfmtiAHFEHkavssyPYESDNTMLFPIFVLGLFTLFVGAIG 552
Cdd:PRK06590 443 -------------------------------------------EKIHH------PHESPAVMTLPLIVLAVLSVFAGALI 473
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 553 IPFnqegvnldiLSKWLAPSINLLHPKSNNSqdwnEFLKDAVVSVSIAYFGIFIASFLYkpiyssLKNLEFINSFVKKGP 632
Cdd:PRK06590 474 VPP---------FLGVLPLTTELAHGEAEHH----LPVWVALLPLVVALAGIALAWLLY------LKKPTLPTSIAAPGR 534
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 633 krilwdkiinGIYDWSYNRAYIDAFYTRFFVGGIRGLAEFT-HFFDRRVIDGMTNGVGVI 691
Cdd:PRK06590 535 ----------FLYTLLRNKYYFDELYEKVFVKPGLALARLLwKDGDDGIIDGLVPNSARL 584
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-694 |
5.49e-165 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 487.56 E-value: 5.49e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIPFIPLpvpmlIGAgLILFPTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSS---VYQYVWSWIINNDFSLDF 77
Cdd:TIGR01974 4 FLIVFLPL-----IGF-LIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEgeaFTQSLFPWISVGGFQVDF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 78 GYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 157
Cdd:TIGR01974 78 GLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 158 FTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNnevnflFVTLCAVLLFAGAVAKSAQFP 237
Cdd:TIGR01974 158 YKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 238 LHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMS 317
Cdd:TIGR01974 232 LHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 318 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSL 397
Cdd:TIGR01974 312 QLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 398 CGIPPLACFWSKDEILNDSW--LYSPIFAIIAWATAGLTAFYMFRIYLLTFEGhlnvhfqnyggkhktpfysislwgkng 475
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG--------------------------- 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 476 vkknsclltmnnnestyflsKTKYPIDKNgrkmtrpfmtiahfehkavssyPYESDNTMLFPIFVLGLFTLFVGAIGIPF 555
Cdd:TIGR01974 437 --------------------KERHEADAH----------------------PHESPLVMLLPLIVLAVGSVFAGFFIVPL 474
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 556 NQegvnldilskWLAPSinLLHPKSNNSQDWNEFLKDAVVSVSIAYFGIFIASFLYkpiyssLKNLEFINSFVKKGpkri 635
Cdd:TIGR01974 475 FE----------FLKGV--LPTSAEPALEHHHVPALEIWSPTAVAILGILLAYLLY------LGNPTLPAKIAQRH---- 532
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 636 lwdkiiNGIYDWSYNRAYIDAFYTRFFVGGIRGLAEFTHFF-DRRVIDGMTNGVGVISFI 694
Cdd:TIGR01974 533 ------SGLYRLLLNKWYFDELYDKVFVKPYLFLGKLLWKDpDDKIIDGFGPGIARLVGA 586
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
440-677 |
9.90e-149 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 432.04 E-value: 9.90e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 440 RIYLLTFEGHLNVHFQNYGGKHKTPFYSISLWGKNG---VKKNSC---LLTMNNNESTYFLSKTKYPIDKNGRKMTRPFM 513
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGsklINKNFRtllLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 514 TIAHFEHKAVSSYPYESDNTMLFPIFVLGLFTLFVGAIGIPFNQEGVNLDILSKWLAPSINLLHPKSNNSQDWNEFLKDA 593
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 594 VVSVSIAYFGIFIASFLYKPIYSSLKNLEFINSFVKKGPKRILWDKIINGIYDWSYNRAYIDAFYTRFFVGGIRGLAEFT 673
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 27463486 674 HFFD 677
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
55-466 |
2.68e-113 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 354.31 E-value: 2.68e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 55 INSSSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVn 214
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 215 flfvTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITV 294
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 295 LLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMG 374
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 375 LMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IAWATAGLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 27463486 453 HFQNYGGKHKTPFY 466
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
38-446 |
1.02e-112 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 352.46 E-value: 1.02e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 38 LLLSIVMIFSIYLSI-----QQINSSSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQG 112
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 113 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWIT 192
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 193 GSFEFRDLFEIFNNLIYNNevnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 272
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 273 LPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 352
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 353 GSIIHSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IAWAT 430
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 27463486 431 AGLTAFYMFRIYLLTF 446
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
12-452 |
3.59e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 301.10 E-value: 3.59e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 12 MLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFsIYLSiQQINSSSVYqyvWSWIINNDFSLDFGYLIDPLTSIMSIL 91
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL-IFLD-QGLETILTN---WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 92 ITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAF 171
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 172 VTNRVGDFGLLLGILGFYWITGSFEFrdlfeifnNLIYNNEVNFLFVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTP 251
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEI--------SQLFILNLDLTLFLLGLLL---AAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 252 ISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 331
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 332 RSALFHLITHAYSKALLFLGSGSIIHSMETIvgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDE 411
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGLNNE--------QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 27463486 412 IL---NDSWLYSPIFAIIAWATaGLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00211 389 ILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
55-413 |
3.92e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 284.54 E-value: 3.92e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 55 INSSSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00032 52 INDAVVHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FEIFNNLI 208
Cdd:MTH00032 132 NYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGY 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 209 YNNEVNFL----FVTLcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMY 284
Cdd:MTH00032 212 YGGGAYESplapFAII-GILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 285 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMETiv 363
Cdd:MTH00032 291 IITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-- 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 27463486 364 gyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00032 369 -----DEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-432 |
4.29e-86 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 272.26 E-value: 4.29e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 133 SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNE 212
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 213 VNFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIG 290
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgysp 367
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463486 368 aKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAG 432
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
1-693 |
1.24e-81 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 271.01 E-value: 1.24e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIPFIPLpvpmlIGAGLILfPTATKSFRRMW----AFQSVLLLSIVMIFSIyLSIQQINSSSVYQYVWSWIINNDFSLD 76
Cdd:PRK07390 10 WLIPLYGL-----IGALLSL-PWSPGIIRRTGprpaAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADLDLS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 77 FGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:PRK07390 83 LSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 157 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliyNNEVNFLFVTLCAVLLFAGAVAKSAQF 236
Cdd:PRK07390 163 WYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAA----TANLDPLTATLLGLALIAGPTGKCAQF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 237 PLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:PRK07390 239 PLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 317 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIhsMETIvgyspakSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:PRK07390 318 AYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSII--LTTI-------TQDLTELGGLWSRMPATTLAFLVGSAG 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 397 LCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFeghlnvhfqnyGGKHKtpfysislwgkngv 476
Cdd:PRK07390 389 LVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVF-----------LGKPQ-------------- 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 477 kknsclltmnnnestyflsktkypidkngrKMTR--PfmtiahfehkavssypyESDNTMLFPIFVLGLFTLFVgaigiP 554
Cdd:PRK07390 444 ------------------------------QKTRrsP-----------------EVLWPMALPMVILAGFTLHL-----P 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 555 FnqegvnldILSKWlapsiNLLhpksnnsQDWNEFLKDAVVSVSIA-YFGIFIASFLY------KPIYSSLKNLEfinsf 627
Cdd:PRK07390 472 L--------LLQQW-----GLL-------PSWEALNLWAAPLLVASgLLGVLLGAWIYlnkawsRPIQLPLRFLQ----- 526
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 27463486 628 vkkgpkrilwdkiingiyDWSYNRAYIDAFYTRFFVGGIRGLAEFTHFFDRRVIDGMTNGVGVISF 693
Cdd:PRK07390 527 ------------------DLLAYDFYTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATL 574
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
36-446 |
1.29e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 271.46 E-value: 1.29e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 36 SVLLLSIVMIFSIYLSIQQINSSsvyqyVWSWIINNDFSLDFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAHDQ 111
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 112 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWI 191
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 192 TGSFefrDLFEIFnnliYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 271
Cdd:MTH00208 216 FNSW---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 272 LLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 351
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 352 SGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAII 426
Cdd:MTH00208 369 SGSIIHSLN--------NEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALI 440
|
410 420
....*....|....*....|
gi 27463486 427 AwatAGLTAFYMFRIYLLTF 446
Cdd:MTH00208 441 A---TLLTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
42-449 |
1.91e-81 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 270.11 E-value: 1.91e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 42 IVMIFSIYLSIQQINSSsvyqyvWSWIINNDFSLDFGYLIDPLtSIMSI---LITTVGIMVliYSDNYMAHDQGYLRFFA 118
Cdd:MTH00004 49 IPLTLFLNSGTESITTN------WPWIFTTTFNIPISFKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFK 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 119 YMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFR 198
Cdd:MTH00004 120 YLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQ 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 199 DLFeifnnliYNNEVNflfvTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRV 278
Cdd:MTH00004 200 QLF-------SPTQTP----TLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQN 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 279 IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHS 358
Cdd:MTH00004 269 NQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHN 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 359 MetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWATAgLTA 435
Cdd:MTH00004 349 L--------NNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTA 419
|
410
....*....|....
gi 27463486 436 FYMFRIYLLTFEGH 449
Cdd:MTH00004 420 AYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
65-441 |
2.25e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 264.46 E-value: 2.25e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 65 WSWIINNDFSLDFGYLIDpltsIMSILITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIY 140
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 141 IFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNFLFVTL 220
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIF-----LLNDNSTLPLLGLI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 221 CAvllfagAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATL 300
Cdd:MTH00066 215 LA------AAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 301 ALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMetivgyspAKSQNMGLMGGLR 380
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27463486 381 KHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYSPIFAIIAWATAgLTAFYMFRI 441
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLNSWALILTLIATS-FTAVYSFRI 423
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
19-444 |
4.24e-79 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 267.94 E-value: 4.24e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 19 ILFPTATKSFRRMWAFQSVLL-LSIVMIFSIYLSiqQINSSSVYQYVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGI 97
Cdd:PRK12647 3 LAAPWLHRLFGRNAGWLLALLpLALFLYFLSFIP--EIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVG 177
Cdd:PRK12647 79 LIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 178 DFGLLLGILGFYWITGSFEFRDLFEiFNNLIYNNEvnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 257
Cdd:PRK12647 159 GLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLH 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 258 AATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSA 334
Cdd:PRK12647 234 SATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 335 LFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILn 414
Cdd:PRK12647 314 VLFLVAHSLYKGALFMVAGIIDHE---------TGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY- 383
|
410 420 430
....*....|....*....|....*....|
gi 27463486 415 DSWLYSPIFAIIAWATAGLTAFYMFRIYLL 444
Cdd:PRK12647 384 EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
3-442 |
1.34e-78 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 257.38 E-value: 1.34e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 3 IPFIPLPVPMLIGAGLILFPtatKSFRRMWAFqSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIinndFSLDFGYLID 82
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 83 PLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPv 162
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 163 AANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliynNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWL 242
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 243 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLF---RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQ 318
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 319 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTL 395
Cdd:COG0651 308 IGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 27463486 396 SLCGIPPLACFWSKDEILNDSW-LYSPIFAIIAWATAGLTAFYMFRIY 442
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
2-449 |
1.26e-73 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 253.69 E-value: 1.26e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPMLIgaglilfPTATKSFRRMWAFQSVLLLSIVmIFSIYLS-IQQINSSSVYQYVWSWIINndFSLDFGYL 80
Cdd:PRK12645 6 IAILLPFIFALLI-------PFLYKYFKRIHTGWFVLPVPVV-LFIYFLSlIPTTMSGNTVMKTLPWIPS--LGINFTLY 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLiynneVNFLFVTLCAVLLFAGAVAKSAQFPLH 239
Cdd:PRK12645 156 REASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 240 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 320 GYMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHV 383
Cdd:PRK12645 311 GLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIM 381
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463486 384 PITKITFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLYspIFAIIAWATAGLTAFYMFRIYLLTFEGH 449
Cdd:PRK12645 382 PITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
19-448 |
1.33e-72 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 250.92 E-value: 1.33e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 19 ILFPTATKSFRRMWAFQSVLLLSIVmIFSIYLSIQQINSS-SVYQYVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGI 97
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLV-CFLYTLGLYPYTASgGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVG 177
Cdd:TIGR00940 90 LVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 178 DFGLLLGILGFYWITGSFEFRDLFEIFNNLIynNEVNFLFVTlcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIH 257
Cdd:TIGR00940 170 GLAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAM---VLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 258 AATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------- 330
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 331 ---------YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 402 PLACFWSKDEILN-------------DSWLYspIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:TIGR00940 396 PFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
65-441 |
2.26e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 245.90 E-value: 2.26e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 65 WSWI------INNDFSLDFgYlidpltsimSILITTVGIMV----LIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSS 134
Cdd:MTH00137 70 WNWMntltfdINISFKFDH-Y---------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTAN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLllgILGFYWI---TGSFEFRDLFEIFNNLIynn 211
Cdd:MTH00137 140 NMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMatnLNSWEIQQIFALSKDFD--- 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 212 evnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGI 291
Cdd:MTH00137 214 ------LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 292 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQ 371
Cdd:MTH00137 288 LTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLN--------DEQ 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463486 372 NMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LNDSWLYspifaiiAWATA------GLTAFYMFRI 441
Cdd:MTH00137 360 DIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLN-------AWALTltliatSFTAVYSLRV 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
13-426 |
1.31e-71 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 240.26 E-value: 1.31e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 13 LIGAGLILFptatkSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNdfSLDFGYLIDPLTSIMSILI 92
Cdd:PRK06525 12 FIGALVVFF-----LPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNLGD--VALFGLVIDPVSVLIGFVV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 93 TTVGIMVLIYSDNYMA-------HDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAAN 165
Cdd:PRK06525 85 VLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYnneVNFLFvtlcavLLFAgAVAKSAQFPLHVWLPDA 245
Cdd:PRK06525 164 SALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---LVFLG------ILFA-AWGKSAQLPFYSWLPDA 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 246 MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPY-IMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 324
Cdd:PRK06525 234 MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHvIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFF 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 325 ALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLC 398
Cdd:PRK06525 314 GLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGT---------RLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
410 420
....*....|....*....|....*...
gi 27463486 399 GIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-440 |
1.98e-71 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 250.23 E-value: 1.98e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 63 YVWSWIinNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 141
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 142 FWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnliyNNEVNFLFVTLC 221
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 222 AVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLA 301
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 302 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGG 378
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27463486 379 LRKHVPITKITFLLGTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAG--LTAFYMFR 440
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
2-440 |
1.59e-70 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 247.41 E-value: 1.59e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLpvpmlIGAgliLFPTATKSFRRM---WAFQSVLLLSIVMIFSIYlsiQQINSSSVYQYVWSWIinNDFSLDFG 78
Cdd:PRK12648 5 LLVLLPF-----LGA---LLAALLPRNARNaeaWLAGLVALAALVLLALLY---PAVAAGEVIRAEIEWL--PALGLNLS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK12648 72 LRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWH 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFefrDLFEIFNN--LIYNNEvnfLFV-TLCAVLLfaGAVAKSAQ 235
Cdd:PRK12648 152 HRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSY---DLDVVLAAgdLIRAHP---LYPpALVLILL--GAFTKSAQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 236 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK12648 224 FPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYST 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 316 MSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHsmETivgyspaKSQNMGLMGGLRKHVPITKITFLL 392
Cdd:PRK12648 304 ISHLGLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMV 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463486 393 GTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWATAG--LTAFYMFR 440
Cdd:PRK12648 375 AAAAMAGVPLLNGFLSKemffAETLDTHLLGSLDWLLPVAATLAgaFSVAYSLR 428
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
31-449 |
2.55e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 240.14 E-value: 2.55e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 31 MWAFQSVLLLSIVM-IFSIYLSIQQINSSSVY-QYV-----------------------------WSWIINNDFSLDFGY 79
Cdd:MTH00108 1 MNLFTSSTLLTLLIlTLPIIMTLTNPYKTNNYpLYVkttisyafiisliptmmfihsgqemiisnWHWMTIQTLKLSLSF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 80 LIDpLTSIMSI---LITTVGIMVliYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:MTH00108 81 KLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 157 WFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnnLIYNNEVNFlfvTLCAVLLfaGAVAKSAQF 236
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIF-----MLNPNNSNL---PLMGLLL--AATGKSAQF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTM 316
Cdd:MTH00108 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 317 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:MTH00108 308 SQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLN--------DEQDIRKMGGLFKTLPFTSTALIIGSLA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463486 397 LCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWATAgLTAFYMFRIYLLTFEGH 449
Cdd:MTH00108 380 LTGMPFLTGFYSKDliiEAANTSYTNAWALLITLIATS-LTAAYSTRIIFFALLGQ 434
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
19-444 |
1.00e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 234.72 E-value: 1.00e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 19 ILFPTATKSFRRM--WAFQSVLLLSIVMIFSIylsIQQINSSSVYQYVWSWIINNDFSLDFgyLIDPLTSIMSILITTVG 96
Cdd:PRK12649 19 WTVPVLEKVLKQRigWFAAAIAFTSFALIAQV---APEVIHGTIITGSISWLPSAGVEFSI--YADGLAVLIGLIASGIG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 97 IMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 176
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 177 GDFGLLLGILGFYWITGSFEFRDLFEifNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALI 256
Cdd:PRK12649 174 GGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 257 HAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---- 332
Cdd:PRK12649 252 HSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepgl 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 333 ---SALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK12649 332 gvaAATFHLLNHATFKACLFLVAGIVAHE---------AATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSK 402
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 27463486 410 DEILNDSW----LYSPIFAII--AWATAGLTAFYMFRIYLL 444
Cdd:PRK12649 403 EMFYETSVemgaLIGGPFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
18-451 |
4.62e-65 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 230.03 E-value: 4.62e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 18 LILFPTATKSFRRMWAFQSVLLLSIVMIFSIYlSIQQINSSSVYQYVWSWIINNDFSLDFgyLIDPLTSIMSILITTVGI 97
Cdd:PRK12646 16 MILLTSKRRALAKYAGYIALVAPIISSIYFLI-QIPSVAKLQYLSTSIPWMKTLDINLDL--RLDGLSLMFSLIISLIGI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 98 MVLIYSDNYMAHDQGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRV 176
Cdd:PRK12646 93 AVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVF 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 177 GDFGLLLGILGFYWITGSFEFRDLFEIFNNLiyNNEVNFLFVTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPISALI 256
Cdd:PRK12646 173 GGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL---GAFTKSAQFPFHIWLPRAMAAPTPVSAYL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 257 HAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG------- 329
Cdd:PRK12646 248 HSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhq 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 330 ----------SYRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK12646 328 qdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHE---------AGTRDIRILSGMRQLFPKMNLVMTIAALSMAG 398
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27463486 400 IPPLACFWSKD----------EILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:PRK12646 399 VPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
34-451 |
8.09e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 213.85 E-value: 8.09e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 34 FQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGIlGFYWITG 193
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 194 SFEFRDLFEIFNNLIYNNEVNFLFVTlcavllfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 273
Cdd:MTH00165 163 SWNFIFYLDFMKNSFEMLLIGLLIML--------AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 274 PLFrVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 353
Cdd:MTH00165 235 NLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 354 SIIHSMETivgyspakSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWAT 430
Cdd:MTH00165 314 SIIHNMSN--------SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420
....*....|....*....|.
gi 27463486 431 aGLTAFYMFRIYLLTFEGHLN 451
Cdd:MTH00165 386 -GLTVSYSFRLIYYSMSGDFN 405
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
37-451 |
1.74e-60 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 212.58 E-value: 1.74e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 37 VLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYwitgsfe 196
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 197 frdLFEIFNNLIYNNEVNFLFVTLCAVLLfaGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 276
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 277 RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 356
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 357 HSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILnDSWLYSP---IFAIIAWATAGL 433
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNmpiMTLILMFLSTSL 383
|
410
....*....|....*...
gi 27463486 434 TAFYMFRIYLLTFEGHLN 451
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNS 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-451 |
6.17e-58 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 203.77 E-value: 6.17e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIpFIPLpvpmlIGAGLILF-PTATKSFRRMWAFqsvLLLSIVMIFSIYLSIQQINSSSVYQYV--WSWIinNDFSLDF 77
Cdd:COG1008 8 LLI-LLPL-----LGALLLLLlPRRNARLARWVAL---AVSLLTLLLSLYLLAGFDPGTGGFQFVesYPWI--PSLGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 78 GYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 157
Cdd:COG1008 77 HLGVDGISLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 158 --FTRPVAANacqKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVtlcavLLFAGAVAKSAQ 235
Cdd:COG1008 155 ggERRIYAAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPM 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 236 FPLHVWLPDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFrviP----YIMYLISVIGIITVLLGATLALAQKDIKR 309
Cdd:COG1008 226 FPFHTWLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKR 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 310 GLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMetivgyspaKSQNMGLMGGLRKHVPIT 386
Cdd:COG1008 302 LIAYSSVSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVL 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463486 387 KITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:COG1008 373 AALFLLAALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
34-452 |
1.29e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 202.00 E-value: 1.29e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 34 FQSVLLLSIVMI-FSIYLSIQQI-NSSSVYQYVWSWIINNDFSLDFGY--LIDPLTSIMSILITTVGIMVLIYSDNYMAH 109
Cdd:MTH00151 1 LKMSSLSSFLLFsYSVFLFPLLGyFGLNGISLIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 110 DQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFvTNRVGDFGLLLGILGFY 189
Cdd:MTH00151 81 DPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALLV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 190 wITGSFefrdlfeifnNLIYNNEVNFLFvtLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 269
Cdd:MTH00151 160 -LLGHW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 270 ARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLF 349
Cdd:MTH00151 227 IRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLF 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 350 LGSGSIIHSMetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAII 426
Cdd:MTH00151 307 LCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLM 378
|
410 420
....*....|....*....|....*.
gi 27463486 427 AWATaGLTAFYMFRIYLLTFEGHLNV 452
Cdd:MTH00151 379 FVGV-GLTALYSARLSFCLVWGSMKS 403
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
18-443 |
3.72e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 198.07 E-value: 3.72e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 18 LILFPTATKSFRRMWAFqsvlllsIVMIFSIYLSIQQINSSSVYQyvWSWIINNDFSLDFGYLIDPLTSIMSILITTVGI 97
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 98 MVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIgFWFTRPVAANACQKAFVTNRVG 177
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 178 DFGLLLGIlGF-----YWITGSFEFRDlfeiFNNLIynnevnflfvTLCAVLlfaGAVAKSAQFPLHVWLPDAMEGPTPI 252
Cdd:MTH00207 151 DVMLLLSI-GWtlnqgHWSITNMWQTD----MNNYI----------ALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPV 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 253 SALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR 332
Cdd:MTH00207 213 SALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPK 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 333 SALFHLITHAYSKALLFLGSGSIIHSMEtivgyspaKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI 412
Cdd:MTH00207 293 LALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLI 364
|
410 420 430
....*....|....*....|....*....|....
gi 27463486 413 LNDSWLY---SPIFAIIAWATaGLTAFYMFRIYL 443
Cdd:MTH00207 365 LESSLFYphnSLMILMIFLAT-ALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
8-439 |
1.36e-54 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 201.81 E-value: 1.36e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 8 LPVPMLIGAGLILFPTATKSFRRM--WAFQSVLLLSIVMIFSiylSIQQINSSSVYQYVWSWI---INNDFSLDFGYLID 82
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKagWPLAAIFVAAAGLLLK---ELPPILDGDALTWSVTWIpdlLGNGVDVNLALRAD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 83 PLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFwfTRPV 162
Cdd:PRK12650 79 ALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 163 AANACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVTlcAVLLFAGAVAKSAQFPLHVWL 242
Cdd:PRK12650 157 GEAGSIRTLILTFFGGLTLLAAVAIAATQTGT---TSLSGILHSDVWAEKPGLTTVV--AVLIAVAAFTKSAQFPFHFWL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 243 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 322
Cdd:PRK12650 232 PEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 323 MLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK12650 312 VATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQ---------AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 27463486 400 IPPLACFWSKDEILnDSWLYSPIFAIIAW---ATAGLTAFYMF 439
Cdd:PRK12650 383 VPPLFGFVSKEGML-TAFLEAPGGNAGVVlllVGAALGAVFTF 424
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-441 |
1.48e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 188.93 E-value: 1.48e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPmLIGAGLILFPTATKSFRRMWAFqsvlLLSIVMIFSIYLSIQQINSSSVYQYV---WSWIInndfslDFG 78
Cdd:PRK08375 4 HLLPLLVAVP-LLAAALIVLLPKRRRLRWALAL----LVAALTFALAISLLPQVLDGGVIAYVvggWPPGI------GIE 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 159 TRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNnliynnEVNFLFVTLcAVLLFAGAVaKSAQFPL 238
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 239 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 314 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITF 390
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAF 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463486 391 LLGTLSLCGIPPLACFWSKDEIL---NDSWLYSPIFAIIawATAGLTAFYMFRI 441
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLL--ASSLLALLYFLRI 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-448 |
2.19e-52 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 189.41 E-value: 2.19e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPMLIGAGLILfptaTKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSwiinnDFSLDFG--Y 79
Cdd:PRK12667 8 LTPILLVLFAFLLPLLSIL----LKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPAPIGivY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 80 LIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK12667 79 EVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 160 RPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNfLFVTLCAVLLFAGAVA------KS 233
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGG-LAGNPPLALGVALALAlwaftiKA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 234 AQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFRVIPYIMYLISVIGIITVLLGATLALAQ 304
Cdd:PRK12667 238 AIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 305 KDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRK 381
Cdd:PRK12667 317 KDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHA---------AGTRDIDELAGLGR 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463486 382 HVPITKITFLLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK12667 388 KMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
81-448 |
1.42e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 184.14 E-value: 1.42e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrdlfeiFNNLIYNNEVNFLFVTLCAVLLFAGAVA-KSAQFPLH 239
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAmKSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 240 VWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLFRV---IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYS 314
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYGPainLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 315 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGL 379
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGGL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463486 380 RKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
79-441 |
2.37e-44 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 165.67 E-value: 2.37e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGLCSYLLIGFW 157
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 158 FTRPVAANACQKAFVTnrvGDFG---LLLGILGFYWITGSFefrDLFEIFNNLIYNNEVNFLFVtLCAVLLFAGAVAKSA 234
Cdd:COG1007 146 RDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSL---NLAGIAAALAAGGANSPLLL-LGLVLVLAGLAFKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 235 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGL 311
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 312 AYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeTIVGYSPAKSQNMGLMGGLRKHVPITKI 388
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLAL 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463486 389 TFLLGTLSLCGIPPLACFWSKDEILNDSW---LYspIFAIIAWATAGLTAFYMFRI 441
Cdd:COG1007 370 AMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-441 |
7.15e-42 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 158.83 E-value: 7.15e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLpVPMLI---GAGLILFPTATKSFRRMWAFQSVLLLSIVMIFsiylsiqqinsssvyqyVWSWIINNDFSLDFG 78
Cdd:PRK05777 5 SLNLILL-LPELIllgAAVVLLLIDAFVRRHSRRATLAVLALLLALVA-----------------LLFVLGAAGGGTAFG 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 --YLIDPLTSIMSILITTVGIMVLIYSDNYMAhDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGF 156
Cdd:PRK05777 67 gmLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAAL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 157 WFTRPVAANACQKAFVtnrVGDFG---LLLGILGFYWITGSFEFRDLFEIFNNLIYNNevnfLFVTLCAVLLFAGAVAKS 233
Cdd:PRK05777 146 RRDRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKL 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 234 AQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRG 310
Cdd:PRK05777 219 SAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLvvAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 311 LAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMETIVGYspakSQNMGLMGGLRKHVPITK 387
Cdd:PRK05777 298 LAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGE----AESISDFAGLSKRSPLLA 369
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 388 ITFLLGTLSLCGIPPLACFWSKDEIL------NDSWLyspifAIIAWATAGLTAFYMFRI 441
Cdd:PRK05777 370 AVMTIFMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRV 424
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
2-356 |
1.10e-41 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 159.09 E-value: 1.10e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPlPVPMLIGAGLILF-PTATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSvyqyvwSWIINndfsldfgyl 80
Cdd:PRK08168 5 VCALLP-AVLMSLAAGGLLLsRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV---------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 iDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTR 160
Cdd:PRK08168 68 -SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfnnliYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHV 240
Cdd:PRK08168 147 PFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAH-----LAAQGASPSLQAAALLLVLAVILKTAQLPVHG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 241 WLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 320
Cdd:PRK08168 222 WLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMG 300
|
330 340 350
....*....|....*....|....*....|....*.
gi 27463486 321 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 356
Cdd:PRK08168 301 FMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
81-448 |
1.11e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 158.51 E-value: 1.11e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 IDPLTSIMSILITTVGIMVLIYSDNYM--AHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfeifnnlIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPL 238
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLVPL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 239 HVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFRVIP--YIMYLISVIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK06521 230 HVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 316 MSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRK 381
Cdd:PRK06521 309 IENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEKLGGLIR 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27463486 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGITFLG 457
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
13-457 |
1.24e-40 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 155.48 E-value: 1.24e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 13 LIGAGLILFPTATKSFRRMWAFQSVLLLsiVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILI 92
Cdd:TIGR01972 9 LIGALLILLLPSNKDGKARWIALVVALA--TLLLSLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGISLLLVLLT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 93 TTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKAFV 172
Cdd:TIGR01972 87 ALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAAMKFFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 173 TNRVGDFGLLLGILGFYWITG-SFefrDLFEIFNNLIYNNEVNFLFVtlcaVLLFAGAVaKSAQFPLHVWLPDAM-EGPT 250
Cdd:TIGR01972 164 YTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL----AFFIAFAV-KVPLFPLHTWLPDAHvEAPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 251 PISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 329
Cdd:TIGR01972 236 AGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSF 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 330 SYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACF 406
Cdd:TIGR01972 316 NELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 27463486 407 WSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNY 457
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
2-451 |
1.43e-40 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 155.36 E-value: 1.43e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLpvpmlIGAGLILFptATKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLI 81
Cdd:PRK05846 8 LLIFLPL-----IGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 82 DPLTSIMSILITTVGIMVLIYSDNYMAHDQGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FT 159
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 160 RPVAANacqKAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLFeifNNLIYNNEVNFLFVTLcavlLFAGAVaKSAQ 235
Cdd:PRK05846 159 RIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLL---NLPLPPGVQYWLFLAF----FIAFAV-KMPM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 236 FPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFRVIP-YIMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:PRK05846 228 FPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDAShEFAPIIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 314 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITF 390
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVL---------YDRLHTRDIADYGGLAKVMPVLAAFF 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463486 391 LLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLN 451
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
41-409 |
2.27e-40 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 156.70 E-value: 2.27e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 41 SIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLIdpLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYM 120
Cdd:PRK08668 29 VIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 121 SFfsTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdl 200
Cdd:PRK08668 107 SL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDF--- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 201 FEIFNNLIYNNEVNF-LFVTLcavLLFAGAVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP-- 274
Cdd:PRK08668 180 ADISQGLINDTSTGFaLIVFL---FLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgt 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 275 -------LFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYS 344
Cdd:PRK08668 257 klfsefgTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALF 336
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463486 345 KALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08668 337 KGLFFLIFAAVIYRTGT---------TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
12-409 |
4.33e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 144.49 E-value: 4.33e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 12 MLIGAGLILFPTATK---SFRRMWAFQSVL-LLSIVMIFSIYLSIQQINSSSVYQYVWSWIInndfSLDFGYLIDPLTSI 87
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 88 MSILITTVGIMVLIYSDNYMAHDQGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAA 164
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 165 NACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfeifnnliynnEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPD 244
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 245 AMEG-PTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMM 323
Cdd:PRK08667 231 AHPAsPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIIL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 324 LALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLMGGLRKHVPITKIT 389
Cdd:PRK08667 311 MGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTSAL 381
|
410 420
....*....|....*....|
gi 27463486 390 FLLGTLSLCGIPPLACFWSK 409
Cdd:PRK08667 382 FLVGAVSIAALPPFNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-441 |
5.05e-36 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 142.26 E-value: 5.05e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIFsIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLI 81
Cdd:PRK06589 3 ILQFTTPNNLLLSTLLVGALNLTSPFATKKDSFIRNFLLITISIF-FFGNILLIDLLFLKGIRAQFELMDFGNYSIGLHL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 82 DPLTSIMSILITTVGIMVLIYSDNYMAHD--QGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFT 159
Cdd:PRK06589 82 EPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 160 RPVAAnacqkafvtnrvgdfgLLLGILGFYWITGSFEFRD----LFEIFNNLIYNNEVNFLFVTLCAVLL-FAGAVAKSA 234
Cdd:PRK06589 162 NISLS----------------GGYKYLKILMISALLLFLPavilIYTKTGNLDFVSGGLFSKNQSIILLLmFIYGIAKTA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 235 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMYLIS------VIGIITVLLGATLALAQKDIK 308
Cdd:PRK06589 226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefnwliFIPIVSIFYSSLKALKTDNIK 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 309 RGLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPI 385
Cdd:PRK06589 306 KILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPL 376
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463486 386 TKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIIAWATAGLTAFYMFRI 441
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
34-446 |
1.15e-34 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 138.90 E-value: 1.15e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 34 FQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFsldfgylidpLTSIMSILITTVGIMVLIYSDNYMAHDQGY 113
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYF----------NSLLFSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 114 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrpvaANACQKA---FVTNRVGDFGLLLGILGFyw 190
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGF-- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 191 itgsfefrdlfeIFNNLIYNNEvnFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 270
Cdd:MTH00095 150 ------------IFSSYYFFSF--SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLM 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 271 RLLPLFRVIPYIMyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 350
Cdd:MTH00095 216 NFSYLILNMNVMK-IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFM 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 351 GSGSIIHSMetivgYSPAKSQNMGLMGGLRKHVpitKITFLLGTLSLCGIPPLACFWSKDEILNDSWL--YSPIFAIIAW 428
Cdd:MTH00095 295 QVGYLIHSN-----FGQQDGRNYSNNGNLPMFI---QLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFF 366
|
410
....*....|....*...
gi 27463486 429 ATAGLTAFYMFRIYLLTF 446
Cdd:MTH00095 367 FSVFLTFGYSYRLWKSFF 384
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-408 |
1.23e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 135.06 E-value: 1.23e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPMLIGAGLILFPtatksFRRMWAFQSVLLLSIVMIFSIYLSIQQINSSsvyqyvwswiinNDFSLDFGYLI 81
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAG------------EIFAAGLWFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 82 DPLTSIMSILITTVGIMVLIYSDNYMAHDQ-------GYLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 154 IGFWFTRpVAANACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFEIFNNLI-YNNEVNFLFVTLCAVLLFAGAVA 231
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGFGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 232 KSAQFPLHVWLPDA-MEGPTPISALIhaatmvaAGIFLVARLLPLFRVipYIM-----------YLISVIGIITVLLGAT 299
Cdd:PRK06458 227 KVGLFPMHAWLPDAhSEAPSPVSALL-------SGVLLNVALYAVLRY--YILidaaigsdfpgRLLLIFGLLSVLVAAF 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 300 LALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETivgyspaksQNMGLM 376
Cdd:PRK06458 298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKYGT---------RDINVI 368
|
410 420 430
....*....|....*....|....*....|..
gi 27463486 377 GGLRKHVPITKITFLLGTLSLCGIPPLACFWS 408
Cdd:PRK06458 369 RGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-448 |
1.14e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 132.00 E-value: 1.14e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 11 PMLIGAGLILFPTATKSFRRMWAfqsvlLLSIVMIFSIYLSiqqinsssvyQYVWSWIINNDFSLDFgyLIDPLTSIMSI 90
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMA-----IVSAVYALGLVAS----------MVPLELTLLDNFGVTL--RADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 91 LITTVGIMVLIYSdnyMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKA 170
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 171 FVTNRVGDFgLLLGILGFYWITGSFEFRDLFEIfnnliynnevnflfVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPT 250
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGLATA--------------DPEAFALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 251 PISALIHAATMVAAGIFLVARLLPLfrvIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGs 330
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 331 yrsALFHLiTHAYSKALLFLGSGsIIHSmETIVGYspaKSQnmglMGGLRKHVPITkitflLGTLSLCGIPPLACFWSKD 410
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAG-ALPS-RNFTEL---ISQ----MLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 27463486 411 EILndsWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
2-441 |
2.87e-31 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 127.76 E-value: 2.87e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPMLIGAGLILFPTATKSFRRMwAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLdfgyli 81
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 82 dpltSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRP 161
Cdd:TIGR01770 74 ----LIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 162 VAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNlIYNNEVNFLfvtLCAVLLFAGAVAKSAQFPLHVW 241
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLL---LGIVLILVGLLFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 242 LPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQL 319
Cdd:TIGR01770 226 VPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 320 GYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSIIHSMETivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLS 396
Cdd:TIGR01770 306 GYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFMFS 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 27463486 397 LCGIPPLACFWSKDEIL-----NDSWLYSPIFAIiawaTAGLTAFYMFRI 441
Cdd:TIGR01770 379 LAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRV 424
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
129-448 |
8.03e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 126.80 E-value: 8.03e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 129 GLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNli 208
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT-- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 209 ynneVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFRVIP---YIMY 284
Cdd:PRK08377 200 ----IDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 285 LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmet 361
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGIT--- 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 362 ivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL--NDSWLYSPIFAIIAWATAGLTAFYMF 439
Cdd:PRK08377 352 ------LGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIlaGLSAGYTWPVALVLGASVVEAVYYFR 425
|
....*....
gi 27463486 440 RIYLLTFEG 448
Cdd:PRK08377 426 LIHTMWFKG 434
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-448 |
5.22e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 124.29 E-value: 5.22e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 6 IPLPVPMLIGAGLILFPTATKSFRrmwaFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWiiNNDFSLDFgyLIDPLT 85
Cdd:PRK07691 8 LPILIPVITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 86 SIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRpVAAN 165
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 166 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDA 245
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 246 MEGP-TPISALIhAATMVAAGIFLVARLLPLFRV--IPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 322
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 323 MLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITKITFLLGTLSLCG 399
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 27463486 400 IPPLACFWSKDEILNDSWLY-SPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
81-378 |
1.71e-29 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 123.22 E-value: 1.71e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 81 IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGLCSYLLIGFWF 158
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 159 TRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfeifNNLIYNNEVNF--LFVTLCAVLLFAGAVAKSAQF 236
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLT------SVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 237 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFR-VIPYIMYLIsvIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 27463486 316 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEtIVGYSPAKSQNMGLMGG 378
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
2-409 |
4.70e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 119.23 E-value: 4.70e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 2 IIPFIPLPVPMLIGAGLILFPtatksFRRMWafQSVLLLSIVMIFSIYLSIQQiNSSSVYQYVwswiinnDFSLDFgYLI 81
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFL-----PGRAR--KALLLLAPVLAVLAVLTVPE-GTYLTVTFL-------GFDLVL-GRV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 82 DPLTSIMSILITTVGIMVLIYSdnymAHDQGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGLCSYLLIgfWFTR- 160
Cdd:PRK12668 66 DKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARGt 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 161 PVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFEIFNnliynnevnflfvTLCAVLLFAGAVAKSAQFPLHV 240
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLHA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 241 WLPDAMEGPTpisalihaatmVAAGIFLVA-----RLLPLFRVIPYIMYLIsVIGIITVLLGATLALAQKDIKRGLAYST 315
Cdd:PRK12668 205 WLPDAYPEAT-----------VTGSVFLSAfttktAVYALARAFPGTELLI-YIGAAMAVYGVFFALLENDLRRLLSYHI 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 316 MSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSpaksqnmglMGGLRKHVPITKITFLL 392
Cdd:PRK12668 273 VSQVGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGTEKLTE---------LGGLYRSMPLTALFCLV 343
|
410
....*....|....*..
gi 27463486 393 GTLSLCGIPPLACFWSK 409
Cdd:PRK12668 344 GALSISAFPLFSGFVSK 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
3-446 |
4.26e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 115.43 E-value: 4.26e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 3 IPFIPLPVPMLIGAGLILFptatKSFRRMWAFQSVLLLSIVMIFSIYLSIQQINsssvyqyvwswiiNNDFSLDFG---- 78
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQR-------------HGPITLDFGgwlp 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 -----YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLL 153
Cdd:PRK12663 68 pfgiqFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 154 IGFWFTRpVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnflfVTLCAVLLFAGAVaKS 233
Cdd:PRK12663 148 ITLGQER-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 234 AQFPLHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFRVIPYIMY-LISVIGIITVLLGATLALAQKDIKRG 310
Cdd:PRK12663 222 ALFPFM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRI 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 311 LAYSTMSQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIHsmetIVGYSPAKSqnmglMGGLRKHVPITK 387
Cdd:PRK12663 300 AGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGYRSLQY-----LGGLYRKEPLFG 370
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27463486 388 ITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIAWATAGLTAFYMFRIYLLTF 446
Cdd:PRK12663 371 ALFLILIFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
36-356 |
6.52e-26 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 112.28 E-value: 6.52e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 36 SVLLLSIVMIFSIYLSIQQINSSSVYqyvWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLR 115
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLgILGFYWITGSF 195
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 196 EFrdlfeifnnliynnevnflfvtLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYL 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 276 FRVIPYImYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 355
Cdd:MTH00063 214 LGFSWLS-IFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 27463486 356 I 356
Cdd:MTH00063 293 M 293
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
13-457 |
1.04e-22 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 102.10 E-value: 1.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 13 LIGAGLI-LFPTATKSFRrmWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLIDPLtSIMSIL 91
Cdd:PRK07363 10 ILGAIIIgFFPGNLPSAR--LRQITLVFAVLVLAWSLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSLGVDGL-SLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 92 ITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAF 171
Cdd:PRK07363 87 LNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGYASIKFL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 172 VTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNFLfvtlcaVLLFAGAVAKSAQFPLHVWLPDAMEGPTP 251
Cdd:PRK07363 164 IYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 252 ISALIHAATMVAAGIFLVARL-LPLFrviPYIMYLIS----VIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 326
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 327 GMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmETIVGYSPAKSQNmGLMGGLRKhVPITKITFLLGTLSLCGIPPL 403
Cdd:PRK07363 315 AAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVGTRDLDVLN-GLMNPIRG-LPLTSALLVLAGMASAGIPGL 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 27463486 404 ACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQNY 457
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
29-441 |
1.15e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 102.12 E-value: 1.15e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 29 RRMWAFQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDfgylIDPLTSIMSILITTVGIMVLIYS---DN 105
Cdd:PRK12662 26 RKLVKIISCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VDILSATMLVLVNFIAVMSVLYGiypNR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 106 YMAHDQGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGI 185
Cdd:PRK12662 102 KEISVNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGATFYLIGI 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 186 LGFYWITGSFEFRDLFEIFNNLIYNN--EVNFLFVTLcavllfaGAVAKSAQFPLHVWLPDAM-EGPTPISALIhAATMV 262
Cdd:PRK12662 181 GFLYAITGTLNMGDMFLIIQDLPTNRaiQIGVLFIMV-------GLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTST 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 263 AAGIFLVARLL------PLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---S 333
Cdd:PRK12662 253 KVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaA 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 334 ALFHLITHAYSKALLFLGSGSIIHSMETIvgyspaksqNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:PRK12662 333 AVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
410 420
....*....|....*....|....*....
gi 27463486 414 NDSWLYSPIFAIIAWAT-AGLTAFYMFRI 441
Cdd:PRK12662 404 DAFIKSNAWIGLVVLLVgSGLSVIYVWKI 432
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
13-456 |
2.66e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 94.77 E-value: 2.66e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 13 LIGAGLILFPTATKSFRRMWAFqSVLLLSIVMIFSIYLSIQQINSSSVYQYVWS--WIinNDFSLDFGYLIDPLtSIMSI 90
Cdd:PRK06473 10 LLGAILIGFWPSGINGKLARSV-ALVIASVLLLLSLVLAFQFDPGNPNQQFTEFipWI--DSLGLSYHLGVDGL-SLPLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 91 LITTVGIMVLIYSDNYMAHDQGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWfTRPVAANACQKA 170
Cdd:PRK06473 86 VLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 171 FVTNRVGDFGLLLGILGFYWITGSFEFRdlfeiFNNLIYNN-EVNFLFVTLCAVLLfaGAVAKSAQFPLHVWLPDA-MEG 248
Cdd:PRK06473 163 LLYTAISGILILVSFLGLVWLSGASSFD-----YEPLRSHTlPLSTQLLLLAPILV--GFGIKIPLVPFHTWLPDAhVEA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 249 PTPISALIhAATMVAAGIFLVARL-LPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 326
Cdd:PRK06473 236 STPVSVLL-AGVLLKLGTYGLLRFgVGLFpEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAA 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 327 GMG---SYRSALFHLITHAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGL---RKHVPITKITFLLGTLSLCGI 400
Cdd:PRK06473 315 AAAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 27463486 401 PPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
119-470 |
8.07e-20 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 93.14 E-value: 8.07e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 119 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGLCSYLLIGFwFTRPVAANACQKAFvtnrvgdfgLLLG-----IL--GF 188
Cdd:CHL00049 113 FLLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------LLMGgasssILvyGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 189 YWITG-SFEFRDLFEIFNNLIYNNEVNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGI 266
Cdd:CHL00049 183 SWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAAS 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 267 FLVARLLPLfrVIPYIM----YLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 342
Cdd:CHL00049 262 ALATRIFDI--PFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYM 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 343 YSKALLFLGSGSIIHSMETIVGyspakSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSW---LY 419
Cdd:CHL00049 340 LFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLY 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 27463486 420 SPIFaiIAWATAGLTAFYMFRIYLLTFEGH---LNVHFQNYGGKHKTPFYSISL 470
Cdd:CHL00049 415 FLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
219-446 |
1.66e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 92.34 E-value: 1.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 219 TLCAVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFRVIPYIMYLISVIGIITVLLG 297
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 298 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmetivgyspAKSQNMG 374
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLIERQ---------AGSSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 27463486 375 LMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLyspIFAIIAWA--TAGLTAFYMFRIYLLTF 446
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
79-438 |
6.00e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.50 E-value: 6.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLtSIMSILITTVG-IMVLIYSDNYMAH-------DQGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWEL 145
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 146 VGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLlGILGFYWIT------GSFEFRDLfeifnnLIYNNEVNFLFVT 219
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPSVLG 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 220 LCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFR---VIPYIMYLISVIGIITVL 295
Cdd:PRK08676 207 ASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 296 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMetivgyspAKSQN 372
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDR 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463486 373 MGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDS-----WLYSPIFAIIAWATAGLTAFYM 438
Cdd:PRK08676 357 FDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
126-409 |
1.85e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 84.70 E-value: 1.85e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 126 SMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFN 205
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 206 NLIYNNEVNFLFVTLCAV--LLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarllpLFRVIPYI 282
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIvaLLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 283 MYLIsVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSM 359
Cdd:MTH00196 153 NILL-IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFSIILALNVYK 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 27463486 360 ETIVGYSpaksqnmglmgGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:MTH00196 232 NLIIEFS-----------GLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
35-413 |
1.90e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 85.45 E-value: 1.90e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 35 QSVLLLSIVMIFsIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYLIdpltsIMSILITTVGIMVLIYSDNYMAHDQGYL 114
Cdd:MTH00199 24 LSTLKLSIGVLL-LIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 115 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGS 194
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 195 FEFRDlfeifNNLIYNNEVNFLFVTLCavLLFAGAVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLVarll 273
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVFSI---- 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 274 pLFRVIPyIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIThayskallflgsg 353
Cdd:MTH00199 240 -LVQIGP-VTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIY------------- 304
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 27463486 354 SIIHSMETIVGYSPAKSQNMGL-----MGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00199 305 MIIYVIMSICSFSIILSLKLTKgliveVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
79-409 |
4.14e-17 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 84.70 E-value: 4.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGLCSyllIGFWF 158
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 159 TRPVAaNACQKAFVTNRVGDFG---LLLGILGFYWITGSFEFRDLfeifNNLIYNNEVNFLFVTLCAVLLFaGAVAKSAQ 235
Cdd:PRK06277 142 ASGTE-EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 236 FPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFRVIPYIMYLISVIGIITVLLGATLALAQKDIKRGL 311
Cdd:PRK06277 216 PPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 312 AYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKI 388
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 27463486 389 TFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
131-448 |
4.98e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 84.88 E-value: 4.98e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 131 VTSSNLIQIYIFWELVGLCSYLLIGfwftrpvaanaCQKA----FVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNN 206
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 207 LIYNNEVNFLFVTlcAVLLFAGAVaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFRVIp 280
Cdd:PRK08042 176 LPLGSDIWLLGVI--GFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 281 yimyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 346
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 347 LLFLGSGSIIHSmetivgyspAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI------LNDSWLY- 419
Cdd:PRK08042 323 VLFLGAGSVWFR---------TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 27463486 420 ----SPIFAIIAWATAGLTAFYMFRIYLLTFEG 448
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
116-445 |
7.12e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 83.93 E-value: 7.12e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 194 SFEFrDLFEIfnnliYNNEVNFLFVTLC-AVLLFAGAVaKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLVAR 271
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLyAGFLIAFGV-KLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKMG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 272 LLPLFR----VIP----YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHL 338
Cdd:PRK12561 232 GYALIRfnvqMLPdahvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 339 ITHAYSKALLFLGSGsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEI---LND 415
Cdd:PRK12561 310 ISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITS 380
|
330 340 350
....*....|....*....|....*....|..
gi 27463486 416 SWLYSPIFAIIawaTAGLTA--FYMFRIYLLT 445
Cdd:PRK12561 381 SDVYSSTFRTI---TILLAAvgLILTPIYLLS 409
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
58-409 |
8.09e-17 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 83.95 E-value: 8.09e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 58 SSVYQYVWSWIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMahDQGYLRFFAYMSFFSTSMLG---LVTSS 134
Cdd:PRK02504 53 AALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGAT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEfrDLFEIFNNLIYNNEvn 214
Cdd:PRK02504 131 ELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALITSPS-- 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 215 fLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfrVIPYI----MYLISVI 289
Cdd:PRK02504 207 -LGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFdeqwKLLFTAL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 290 GIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayskalLFLGSGS----IIHSMET- 361
Cdd:PRK02504 283 AILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------LFMNLGAfacvILFSLRTg 356
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 27463486 362 ---IVGYSpaksqnmglmgGLRKHVPITKITFLLGTLSLCGIPPLACFWSK 409
Cdd:PRK02504 357 tdqISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
3.66e-15 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 69.76 E-value: 3.66e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 27463486 67 WIINNDFSLDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
86-403 |
2.83e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 66.74 E-value: 2.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 86 SIMSILITTVGIMVLIYSDNYmAHDQGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWftrpvaAN 165
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 166 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFrdlfeifnnliynnevNFLFVTLCAVLLFAGAVAKSAQFPLHV-- 240
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 241 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP--YIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQ 318
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 319 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSIihSMETIvGYSPAKSQNMGLMGGlrkhvpi 385
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330
....*....|....*...
gi 27463486 386 tkitfLLGTLSLCGIPPL 403
Cdd:PRK06459 332 -----TLLASSLSGLLPN 344
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
215-441 |
7.72e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 65.27 E-value: 7.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 215 FLFVTLCAVLLFAGAvaksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLplfrvipyIMYLISVIGIIT 293
Cdd:MTH00198 302 YLFITVAILFKLAAA-------PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVI--------TSKLLLSVAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 374 GLMGG---LRKHVPIT-------KITFLLGT--LSLCGIPPLACFWSKDEILNDS----WLYS-PIF---AIIAWATAGL 433
Cdd:MTH00198 446 GSFGNynlVRRLVDLTilsrgqpYIAFSLAIvfLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCI 525
|
....*...
gi 27463486 434 TAFYMFRI 441
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
140-349 |
7.83e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 65.11 E-value: 7.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 140 YIFWELVGLCSYLLIGFW--FTRPVAANacqKAFVTNRVGDFGLLLGIL--GFYWITGSFEFRDLfeifnnliYNNEVNF 215
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTAL--------AAKDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 216 LFVTLC-AVLLFAGAVaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLVARLLPLFR----VIP----YIMYLI 286
Cdd:PRK02546 210 GFQLLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKMGGYALLRmnagMLPdahaQFAPLL 282
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 27463486 287 SVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLF 349
Cdd:PRK02546 283 IVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLF 348
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
135-439 |
8.13e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 64.94 E-value: 8.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 135 NLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIfNNLIYNNEVN 214
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 215 FLFVTlcavlLFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRV-IPYIMYLISVIGII 292
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 293 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsMETIVgYSPAK 369
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHH 376
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 370 SQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMF 439
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
66-401 |
5.60e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 62.39 E-value: 5.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 66 SWIINNDFSLDFGYLIDPLTSI------MSILITTVGIMVLIYSDNYMAHDqgylrFFAYMSFFSTSMLGLVTSSNLIQI 139
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLFKE-----FLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 140 YIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFEIFNNLIYNNEVNFLFVT 219
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 220 LcavllFAGAVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFRVIP-YIMYLISVIGIITVLLG 297
Cdd:MTH00204 215 F-----FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASeYFAPLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 298 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSIIHSMET-IVGYspaksqnm 373
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTrLIKY-------- 361
|
330 340
....*....|....*....|....*...
gi 27463486 374 glMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:MTH00204 362 --YRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
17-456 |
1.33e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 60.72 E-value: 1.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 17 GLILFPTATKSFRRMWAFQSVLLLSIVMIFsIYLSIQQINSSSvyqyvwSWIINNdfsldFGYLIDPLTSIMSILITTVG 96
Cdd:MTH00206 5 PLIMLLLMTILSKKKWLWRSTTFFSFLIAL-LFLLWFKWSSEV------GWSFSN-----LYLSYDPLSSPLVILSCWLL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 97 IMVLIYSDNYMaHDQGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVT 173
Cdd:MTH00206 73 PLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 174 NRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVTLcavllfaGAVAKSAQFPLHVWLPDA-MEGPTpi 252
Cdd:MTH00206 152 TLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYGVHLWLPKAhVEAPV-- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 253 salihAATMVAAGIFL------VARLLPLFRVIPYIM-YLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLA 325
Cdd:MTH00206 222 -----AGSMVLAGVLLklggygMMRIILILGPSTKLSsYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAG 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 326 LGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmetiVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIP 401
Cdd:MTH00206 297 ILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLP 366
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 27463486 402 PLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:MTH00206 367 PFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLS 421
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-437 |
4.66e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 59.48 E-value: 4.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 1 WIIpfIPLPVPMLIGAGLILFPTATKSFRRMWAFQSVLLLSIVMIfsIYLSIQQINSSSVYQYvwswiinNDFSLDFG-- 78
Cdd:PRK12666 7 LII--LPILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAVAV--ALLASAAAGGIGVYLL-------GNWPAPFGiv 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLTSIMSILITTVGIMVLIYSdnyMAHDQGYLRFF-AYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSY--LLIG 155
Cdd:PRK12666 76 LVLDRLSALMLLLTALLALAALLYA---LAGWDRAGPHFhALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYglLLHG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 156 FWFTRpVAANACQKAFvtNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVnfLFVTLCAVLLFAGAVaKSAQ 235
Cdd:PRK12666 153 SGRAR-VRAGLHYVAI--NLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRA--LLEAGAALLLVVFLI-KAAM 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 236 FPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLFR----------VIPYIMYLisviGIITVLLGATLALAQ 304
Cdd:PRK12666 227 WPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFgpeagasagfGQDWLLPG----GLATLAFGAIGVLAA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 305 KDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL-----------GSGSIIHSMETivgYSPAKS 370
Cdd:PRK12666 301 QRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVTPEL---YDLDEE 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 371 QNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN---------DSWLY------SPIFAIIAWATAGLTA 435
Cdd:PRK12666 378 EEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLAALIALTRAGIRL 457
|
..
gi 27463486 436 FY 437
Cdd:PRK12666 458 FW 459
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
214-445 |
7.93e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 57.97 E-value: 7.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 214 NFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFRVIPYIMylisVIGIIT 293
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 27463486 374 GLMGGLrkhvpitkitfllgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTA--FYMFRIYLLT 445
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSF 293
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
87-345 |
2.40e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.98 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 87 IMSILITTVGIMVLIYSDNYMAHDqgylrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANA 166
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 167 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFeifnNLIYNNEV-NFLFvtlcaVLLFAGAVAKSAQFPLHVWLPDA 245
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----CLKIEKELqYFIF-----LGFFLSLAIKIPKIPFHIWLPQA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 246 -MEGPTPISALIHAATMVAAGIFLVARLLPLF-RVIPYIMYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLG--- 320
Cdd:MTH00217 233 hVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvt 312
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 27463486 321 ---------------YMMLALGMGSyrSALFHLITHAYSK 345
Cdd:MTH00217 313 lgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
237-415 |
2.62e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 56.37 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 237 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfrvipyiMYLISVIGIITVLLGATLALAQKDIKRGLAY 313
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN--------PTLLLTLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 314 STMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMETivgyspAKSQNMGLMgglRKHVPITKITFLLG 393
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTS---WTKSPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 27463486 394 TLSLCGIPPLACFWSKDEILND 415
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
38-436 |
7.03e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 55.52 E-value: 7.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 38 LLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFSLDFGYL-IDPLTSIMSILITTVGIMVLIYSDNYMAHDQGYLRF 116
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 117 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFE 196
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 197 FRdLFEIFNNLIYnnevnflFVTLCAVLLFAGAVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------V 269
Cdd:MTH00014 173 ML-MSSMEPPSIY-------LMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 270 ARLLPLFrviPYIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHA 342
Cdd:MTH00014 238 LRMSSLF---MHINKSLSAPFSSISLVGAVITslicIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 343 YSKALLFLGSGSIihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK----DEILNDSWL 418
Cdd:MTH00014 315 LCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSLS 385
|
410
....*....|....*...
gi 27463486 419 YSPIFAIIAWATAGLTAF 436
Cdd:MTH00014 386 TAILLAITSFLAAAYSLF 403
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
128-397 |
8.43e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 55.34 E-value: 8.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 128 LGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTnRVGDFGLLLGIL--GFYwitGSFEFRDLFEIFN 205
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 206 NLIYNNEVNFLFVTlcaVLLFAGAVaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVARLLPLFRV----IP 280
Cdd:CHL00011 202 NQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRInmelLP 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 281 YIMYLIS----VIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLFLG 351
Cdd:CHL00011 271 HAHSIFSpwlvIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFFL 348
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 27463486 352 SGSIIHSMETIVgyspaksqnMGLMGGLRkhVPITKITFLLGTLSL 397
Cdd:CHL00011 349 AGTSYDRIRLVY---------LDEMGGIA--IPMPKIFTMFSSFSM 383
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
119-439 |
1.23e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.20 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 119 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 196 EFRDLFEIFNnliynnevnflfvtlcAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 275
Cdd:MTH00200 85 GISEMLGPLS----------------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 276 FRVIpyimyLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsi 355
Cdd:MTH00200 149 LNSN-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 356 ihsmetivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTA 435
Cdd:MTH00200 219 ---------LNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLS 289
|
....
gi 27463486 436 FYMF 439
Cdd:MTH00200 290 LFFY 293
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
80-453 |
1.50e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 54.54 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 80 LIDPLTSIMSILITTVGIMVLIYSDNYMA-----HDQGYLrffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLI 154
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIII 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 155 GFWFTRPVAANACQK-AFVTnRVGDFGLLLGILGFYWITGSFEFrDLFEIFNNLIYNNEVNFLFVTLCavlLFAGAVaKS 233
Cdd:MTH00068 134 TRWGNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC---LLAFMV-KM 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 234 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFR-VIPYIMYLISVIGIITVLLGATLALAQK 305
Cdd:MTH00068 208 PLYGLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLTpLSKELSYPFIILALWGVLMTSLICLRQT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 306 DIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSGSiihsmetivgYSPAKSQNMGLMGGLRK 381
Cdd:MTH00068 281 DLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRGAQT 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 27463486 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRIYLLTFEGHLNVH 453
Cdd:MTH00068 351 ILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
116-425 |
1.73e-07 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 53.78 E-value: 1.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 116 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSF 195
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 196 EFrdlfeifnnLIYNNEVNFLFVTLCAVLlfagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPL 275
Cdd:MTH00041 85 SI---------NGPLNTLSSIIITLALAL-------KLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 276 FRVIPYI-MYLISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSgs 354
Cdd:MTH00041 143 ISISNLLnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN-- 220
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 27463486 355 iIHSMETIvgyspaksqnmGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSK-----DEILNDSWLYSPIFAI 425
Cdd:MTH00041 221 -NFSLSTL-----------SHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
114-456 |
4.09e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 53.04 E-value: 4.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 114 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITG 193
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 194 SFEFRDLfEIFNNLIYNNEVNFLFVTLC--AVLLfagavaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 271
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 272 LL----PLFRVIPYIMYLISVIGIItvlLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYS 344
Cdd:MTH00127 247 MMvmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLT 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 345 KALLFLGSGSiihsmetivGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFA 424
Cdd:MTH00127 324 SSALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTL 394
|
330 340 350
....*....|....*....|....*....|..
gi 27463486 425 IIAWATAGLTAFYMFRIYLLTFEGHLNVHFQN 456
Cdd:MTH00127 395 ALTGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-324 |
8.94e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 51.71 E-value: 8.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 79 YLIDPLTSIMSILITTVGIMVLIYSDN--------YMAHDQGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCS 150
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 151 YLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFnnliyNNEVNFLFVTLCAVLLFAGAV 230
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 231 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLlpLFRVIPY------IMYLISVIGIITVLLGATLALAQ 304
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKF--TYIIIGYetiktaITNFIRPIALATLIIAPYFAYQA 303
|
250 260
....*....|....*....|
gi 27463486 305 KDIKRGLAYSTMSQLGYMML 324
Cdd:PRK06591 304 KNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
61-448 |
1.95e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 50.61 E-value: 1.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 61 YQYVWSWIINNDFsldfgYLIDPLTSIMSILITTVGIMVLIYSdnymahdQGYLRFFAYMSFFSTSMLGLV-------TS 133
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-------QKSVKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 134 SNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfeIFNNLIYNNEV 213
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 214 NFLFVTLCAVLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFRVIPYIMY-L 285
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSiF 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 286 ISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAY-SKALLFLGSGSiihsmet 361
Cdd:MTH00150 220 LISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFcSSGLFCLANYT------- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 362 ivgYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWATAGLTAFYMFRI 441
Cdd:MTH00150 293 ---YEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYL 369
|
....*..
gi 27463486 442 YLLTFEG 448
Cdd:MTH00150 370 YTSIQHG 376
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
214-470 |
1.08e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 48.13 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 214 NFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFrvipyimYLISVIGIIT 293
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 294 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMETIVGYSPAKSQNM 373
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 374 glmgglrkhvpitkITFLLGTLSLCGIPPLACFWSKDEILND--SWLYSPIFAIIAWATAgLTAFYMFRIYLLTFeghLN 451
Cdd:MTH00197 227 --------------VFLGLSFLSLGGLPPLSGFFLKWLILTSllSSNISLITFMLILSTC-FSLYYYLSLAYKSL---IL 288
|
250
....*....|....*....
gi 27463486 452 VHFQNYGGKHKTPFYSISL 470
Cdd:MTH00197 289 SNWMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
34-343 |
1.22e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 48.44 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 34 FQSVLLLSIVMIFSIYLSIQQINSSSVYqyvwSWIInndfsldFGYLIDPLTSIMSILITTVGIMVLIYSDNYMahdqgY 113
Cdd:MTH00205 19 KDWSFFSNLLLIGLFFSSFFFSNSFLMT----SFIS-------SSFSFDSLSLPLIMLSFWISLLMVLASYKVF-----K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 114 LRFFAYMSFFSTSMLGLVT-----SSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGF 188
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILilsfsVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 189 YWITGSFEFRDLFEIFNNLIYNNevnflfvTLCAVLLFAGAVaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIF 267
Cdd:MTH00205 163 NSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLAFLV-KLPMYFVHLWLPKAhVEAPV-------SGSMILAGVL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 268 LVA---RLLPLFRVIPYIMYLISVIGIITVLLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----M 322
Cdd:MTH00205 228 LKLggyGLIRITSMLYKLNSNFSELFFSISLWGGVMTgmicLRQVDLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiM 307
|
330 340
....*....|....*....|.
gi 27463486 323 MLALGMGSyrSALFHLITHAY 343
Cdd:MTH00205 308 MVAHGLCS--SGMFALANVNY 326
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
213-426 |
1.98e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 47.80 E-value: 1.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 213 VNFLFVTLCAVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIflvarLLPLFRVIPYIMYLisviG 290
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALV-----LLLFFSGEEILLFL----G 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 291 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMETIvgy 365
Cdd:PRK12664 209 IITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF--- 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 27463486 366 spaksqNMGLMGGLRKhVPITKITFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 426
Cdd:PRK12664 286 ------NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
34-356 |
7.52e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 42.45 E-value: 7.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 34 FQSVLLLSIVMIFSIYLSIQQINSSSVYQYVWSWIINNDFS-LDFGYLIDPLTSIMSILITTVGIMVLIYSDNYMAHDQG 112
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSnISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 113 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGLCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGFYWIT 192
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 193 GSFefrdlfeIFNNLIYNNEVNFLFVtLCAVLLFagaVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFLVAR 271
Cdd:MTH00163 166 GSL-------SFFLLNFFGSLNFLWY-LSMILAF---LVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 272 LLPLFRVIPYIMYLISVIGIITV---LLGATLA----LAQKDIKRGLAYS-------------TMSQLGY-----MMLAL 326
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWIsisLVGGVIVslicLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIGH 307
|
330 340 350
....*....|....*....|....*....|
gi 27463486 327 GMGSyrSALFHLITHAYSKallfLGSGSII 356
Cdd:MTH00163 308 GLCS--SGLFCLANIIYER----LGSRSLL 331
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
222-414 |
2.53e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.53 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 222 AVLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfrvipYIMYLISVIGIITVLLGATLA 301
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 302 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMETIVGYSPAKSQNMglMGGLRK 381
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190
....*....|....*....|....*....|...
gi 27463486 382 HVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
237-413 |
3.63e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 40.29 E-value: 3.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 237 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLfrvipyimYLISVIGIITVLLGATLALAQKDIKRGL 311
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNS--------NLLIIMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 312 AYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMETivgyspaksqNMGLMGGLRKHVPITKITFL 391
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLNST----------NINKLSSSWSKNPTLTSMMM 245
|
170 180
....*....|....*....|..
gi 27463486 392 LGTLSLCGIPPLACFWSKDEIL 413
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
203-414 |
4.56e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.81 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 203 IFNNLIYNNEVNFLFVTLCAVLLFagavaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFrVIPYI 282
Cdd:MTH00160 76 ILNMLNLMLFNNISSMLINSSLLL-----KLGAAPFHFWFPEVMEGLSWINCFI---------LMTWQKIAPLI-LLSYL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 27463486 283 MY--LISVIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiihsme 360
Cdd:MTH00160 141 INnnFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI---------- 207
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 27463486 361 tIVGYSPAKSQNMGLMGGLRKHVPITKITFLLGTLSLCGIPPLACFWSKDEILN 414
Cdd:MTH00160 208 -ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQ 260
|
|
| |
