NCBI Conserved Domain Search

Conserved domains on [gi|13422423|gb|AAK23097|]

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TonB-dependent receptor [Caulobacter vibrioides CB15]

Protein Classification

TonB-dependent receptor( domain architecture ID 11493160)

TonB-dependent receptor acts as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

TonB-Xanth-Caul

TIGR01782

TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...

53-881

0e+00

TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]

Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 789.22 E-value: 0e+00

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423    53 VDAVVITGQREAQRAAIVVKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEPRFPVIRGLRSTYNRTTID 132
Cdd:TIGR01782   1 LDAVQVTGQRASLEKAIDAKRDADSVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVSVRGLGPSYNRTTLN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   133 GALVASVDESGRTVPMDIVPSVMAGRLEVIKTVTPENDGNAIGGVINVTTRSAFDAKRPFFNGMASYGQYERSGDvrnDK 212
Cdd:TIGR01782  81 GRTIASTDSGGRAFSLDLLPSELVSGVEVYKTPTADMDEGGIGGTVDLRTRSPFDYDGRTLSGSAQGGYNDLAGK---DK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   213 PSYRLAFAAGRTFGaEDQWGVVIGASHEQLDYDIPQVEAADPsvREYTAAGAPvlsgsptGNGLQVPTQVRLFWYNNTKQ 292
Cdd:TIGR01782 158 PGPRGAASYSWTFG-DGQFGVLLSASYQKRDFAEDNVETENW--GTYTSADGG-------AQGLYFPRGVRYRSYRNDRE 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   293 RSGVNAKLEYRPSDAFRWDASVLASRMEDDEERIEYRIEPLGN-----VANQTPTSGAFTRG-----RGIIHLNQPITTR 362
Cdd:TIGR01782 228 RKGVNGSLQWRPSDALELYLDTLYSKYDDDETRQQIEFRTLNGgstviTSNQTATSGALVQGtvanlQILVEARYNEEKE 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   363 EIGLARTGFAWSFaPNWKLDGDLVYSLAGLKVPNHSVEFRTvdAQGANYAFTYDTTNRLFPTFNPVNEAALR--NPANYV 440
Cdd:TIGR01782 308 TTTSLTLGGEWTG-DRWTLDGDLGYSKATRDRPDRVTRFFT--APTPGYDFDYRGGPTLTLGTPADGDDASNytNPANGE 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   441 LQQHRDALTKTNESTTQARLDLAFDDDaHWKLKFGgvLRSSERDFRNSQVNYRA-------ATGFVYTLAEVDKAGPSQL 513
Cdd:TIGR01782 385 LRRTQISYQKAEDSEDAAQLDATFDGP-FTSLKFG--VRYRRRDKTNRGSRYRRsiigatgASGLAGVPSDLAGAGLDGG 461

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   514 IAGRYRLDPRIDAEAATAFFRANRGRFTTTVSAPT--GNYDVSEDVQAGYAQASYQFG-DLTLLGGLRYERTKVTSDAVR 590
Cdd:TIGR01782 462 LGGPLTGWDPADLDAFLNAARGDAAGGGTYTYASTapNTYTVTEDTTAAYAMANFDTGlRLRGNVGVRYERTDQTSDGWQ 541

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   591 N------TGGVLTPVSNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATENLNFDGS--QPTLSRGNPDL 662
Cdd:TIGR01782 542 SqpaangTGSVLVPVSADRDYTDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTSLSDDGTggTVTVSGGNPDL 621

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   663 KARESESFDLSVEFYP-TDGMVSLAVFSKDIKNEIFTLSSSERLDVGRG--VETVLISTPRNAETA-KIKGVEFAVQQAF 738
Cdd:TIGR01782 622 KPYESDNLDLSLEWYFgPGGLLSAAVFYKDIKNFIVTTTSTETNDGGGGlvVAGVLVSRPVNGGKAgKIRGVELGYQQTF 701

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   739 TFLPAPLDGFGFNGNVTWLDTEFTFRTST-GPRVTGLFQQPEITTNAAVYYQRGPFEARVSHNYIGGQLETINDANVN-S 816
Cdd:TIGR01782 702 DFLPGPLSGFGVQANYTYVDSEADPSVDGvQRRKLPLPGLSKNTANATLYYEKGGFSARLSYNYRSDYLLDVGGSNINrL 781

                         810       820       830       840       850       860
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 13422423   817 DQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGpGRRYLQEWANYGRTYWVGAAVNF 881
Cdd:TIGR01782 782 DRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTG-GKQRPREYVETGRTYMLGLRYKF 845

Name

Accession

Description

Interval

E-value

TonB-Xanth-Caul

TIGR01782

TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...

53-881

0e+00

Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 789.22 E-value: 0e+00

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423    53 VDAVVITGQREAQRAAIVVKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEPRFPVIRGLRSTYNRTTID 132
Cdd:TIGR01782   1 LDAVQVTGQRASLEKAIDAKRDADSVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVSVRGLGPSYNRTTLN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   133 GALVASVDESGRTVPMDIVPSVMAGRLEVIKTVTPENDGNAIGGVINVTTRSAFDAKRPFFNGMASYGQYERSGDvrnDK 212
Cdd:TIGR01782  81 GRTIASTDSGGRAFSLDLLPSELVSGVEVYKTPTADMDEGGIGGTVDLRTRSPFDYDGRTLSGSAQGGYNDLAGK---DK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   213 PSYRLAFAAGRTFGaEDQWGVVIGASHEQLDYDIPQVEAADPsvREYTAAGAPvlsgsptGNGLQVPTQVRLFWYNNTKQ 292
Cdd:TIGR01782 158 PGPRGAASYSWTFG-DGQFGVLLSASYQKRDFAEDNVETENW--GTYTSADGG-------AQGLYFPRGVRYRSYRNDRE 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   293 RSGVNAKLEYRPSDAFRWDASVLASRMEDDEERIEYRIEPLGN-----VANQTPTSGAFTRG-----RGIIHLNQPITTR 362
Cdd:TIGR01782 228 RKGVNGSLQWRPSDALELYLDTLYSKYDDDETRQQIEFRTLNGgstviTSNQTATSGALVQGtvanlQILVEARYNEEKE 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   363 EIGLARTGFAWSFaPNWKLDGDLVYSLAGLKVPNHSVEFRTvdAQGANYAFTYDTTNRLFPTFNPVNEAALR--NPANYV 440
Cdd:TIGR01782 308 TTTSLTLGGEWTG-DRWTLDGDLGYSKATRDRPDRVTRFFT--APTPGYDFDYRGGPTLTLGTPADGDDASNytNPANGE 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   441 LQQHRDALTKTNESTTQARLDLAFDDDaHWKLKFGgvLRSSERDFRNSQVNYRA-------ATGFVYTLAEVDKAGPSQL 513
Cdd:TIGR01782 385 LRRTQISYQKAEDSEDAAQLDATFDGP-FTSLKFG--VRYRRRDKTNRGSRYRRsiigatgASGLAGVPSDLAGAGLDGG 461

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   514 IAGRYRLDPRIDAEAATAFFRANRGRFTTTVSAPT--GNYDVSEDVQAGYAQASYQFG-DLTLLGGLRYERTKVTSDAVR 590
Cdd:TIGR01782 462 LGGPLTGWDPADLDAFLNAARGDAAGGGTYTYASTapNTYTVTEDTTAAYAMANFDTGlRLRGNVGVRYERTDQTSDGWQ 541

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   591 N------TGGVLTPVSNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATENLNFDGS--QPTLSRGNPDL 662
Cdd:TIGR01782 542 SqpaangTGSVLVPVSADRDYTDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTSLSDDGTggTVTVSGGNPDL 621

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   663 KARESESFDLSVEFYP-TDGMVSLAVFSKDIKNEIFTLSSSERLDVGRG--VETVLISTPRNAETA-KIKGVEFAVQQAF 738
Cdd:TIGR01782 622 KPYESDNLDLSLEWYFgPGGLLSAAVFYKDIKNFIVTTTSTETNDGGGGlvVAGVLVSRPVNGGKAgKIRGVELGYQQTF 701

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   739 TFLPAPLDGFGFNGNVTWLDTEFTFRTST-GPRVTGLFQQPEITTNAAVYYQRGPFEARVSHNYIGGQLETINDANVN-S 816
Cdd:TIGR01782 702 DFLPGPLSGFGVQANYTYVDSEADPSVDGvQRRKLPLPGLSKNTANATLYYEKGGFSARLSYNYRSDYLLDVGGSNINrL 781

                         810       820       830       840       850       860
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 13422423   817 DQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGpGRRYLQEWANYGRTYWVGAAVNF 881
Cdd:TIGR01782 782 DRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTG-GKQRPREYVETGRTYMLGLRYKF 845

ligand_gated_channel

cd01347

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...

78-881

3.03e-98

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.

Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 320.55 E-value: 3.03e-98

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  78 VSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQ-GEPRFPVIRGLRSTYNRTTIDGALVASvDESGRTVPMDIVPSVMA 156
Cdd:cd01347   1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGgGGGSTISIRGFGPDRTLVLVDGLPLAS-SNYGRGVDLNTIPPELI 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 157 GRLEVIKTVTP-ENDGNAIGGVINVTTRSAFDakrpFFNGMASYGQYERsgdvrNDKPSYRLAFAAGRTFGAEDQWGVVI 235
Cdd:cd01347  80 ERVEVLKGPSSaLYGSGAIGGVVNIITKRPTD----EFGGSVTAGYGSD-----NSGSSGGGGFDVSGALADDGAFGARL 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 236 GASHEQLDYDIPQVEAADPSVREytaagapvlsgsptgnglqvptqvrlfwynntkqRSGVNAKLEYRPSDAFRWDASVL 315
Cdd:cd01347 151 YGAYRDGDGTIDGDGQADDSDEE----------------------------------RYNVAGKLDWRPDDDTRLTLDAG 196

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 316 ASRMEDDEERIEYRIEPLGNVANQTPTSgaftRGRGIIHLNQPITTREIGLARTGFAWSFApNWKLDGDLVYSlaglkvp 395
Cdd:cd01347 197 YQDQDADGPGGTLPANGTGSSLGGGPSS----NTNGDRDWDYRDRYRKRASLGLEHDLNDT-GWTLRANLSYS------- 264

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 396 nhsvefrtvdaqganyaftYDTTNRLFPTFNPVNEAALRNPANYVLQQHRDaltkTNESTTQARLDLAFDDDA-HWKLKF 474
Cdd:cd01347 265 -------------------YTDNDGDPLILNGGNNAAGGDLGRSGYSSERD----TTQLGFDAGLNAPFGTGPvAHTLTL 321

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 475 GgvlrsserdfrnsqVNYRaatgfvytlaevdkagpsqliagryrldpridaeaataffranrgrftttvsaptgNYDVS 554
Cdd:cd01347 322 G--------------VEYR--------------------------------------------------------REELD 331

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 555 EDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDAVRNTggvltPVSNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIG 633
Cdd:cd01347 332 EKQTALYAQDTIELTDdLTLTLGLRYDHYDQDSKDTIAG-----GTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFR 406

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 634 RPDYGSLAATENLnfdgsQPTLSRGNPDLKARESESFDLSVEFYP-TDGMVSLAVFSKDIKNEIFTLSSSERLdvgrgve 712
Cdd:cd01347 407 APSLGELYGGGSH-----GGTAAVGNPNLKPEKSKQYELGLKYDPgDGLTLSAALFRIDIKNEIVSTPTNTGL------- 474

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 713 tVLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGFNGNVTWLDTEFTfRTSTGPRVTGLFQQPEITTNAAVYYQRGP 792
Cdd:cd01347 475 -GLVTVYVNGGKARIRGVELEASYDLT------DGLGLTGSYTYTDTEVK-RTDGATTGNRLPGIPKHTANLGLDYELPD 546

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 793 --FEARVSHNYIGGQleTINDANVNSDQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGPGRRYLQEWANYG 870
Cdd:cd01347 547 egLTAGGGVRYRGKQ--YADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSVRGSGLYGYYGPG 624

                       810
                ....*....|.
gi 13422423 871 RTYWVGAAVNF 881
Cdd:cd01347 625 RTYYLSVSYKF 635

CirA

COG1629

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

53-850

1.47e-58

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 212.00 E-value: 1.47e-58

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  53 VDAVVITGQREAQRaaivvKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEPRFPVIRGLRSTYNR--TT 130
Cdd:COG1629   1 LEEVVVTATRTDES-----LQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGGGNRvlVL 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 131 IDGalVASVDESGRTVPMDIVPSVMAGRLEVIK-TVTPENDGNAIGGVINVTTRSAFDAKRPFFNGMA-SYGQYERSGDV 208
Cdd:COG1629  76 VDG--VPLNDPSGGDGGLSYIDPEDIERVEVLRgPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYgSYGTYRASLSL 153

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 209 RndkpsyrlafaagrtfGAEDQWGVVIGASHEQLDYdipqveaadpsvreytaagapvlsgsptgnglqvptqvrlFWYN 288
Cdd:COG1629 154 S----------------GGNGKLAYRLSASYRDSDG----------------------------------------YRDN 177

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 289 NTKQRSGVNAKLEYRPSDAFRWDASVLASRMEDDEerieyriePLGNVANQTPTSGAFTRGRGIIHLNQPITTREIGLAR 368
Cdd:COG1629 178 SDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDS--------PGYLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLS 249

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 369 TGFAWsFAPNWKLDGDLVYSLaglKVPNHSVEFRTVDAQGANYAFTYDTTNRLfptfnpvneaalrnpanyvlqqhrdal 448
Cdd:COG1629 250 LEYEH-LGDGLKLSASAYYRY---DDTDLDSDFTPTPADGGTLEQTDFDNRTY--------------------------- 298

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 449 tktnesTTQARLDLAFDDDAHWKLKFGGVLRSSERDFRNSQVNYraatgfvytlaevdkagpsqliagryrldpridaea 528
Cdd:COG1629 299 ------GLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDL------------------------------------ 336

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 529 ataffranrGRFTTTVSAPTGNYDVSEDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDavrNTGGVLTPVSNDGSYAN 607
Cdd:COG1629 337 ---------GSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDkLTLTAGLRYDYVSYDVD---DTVTGTDSASGSRSYSA 404

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 608 WLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATenlnfdgSQPTLSRGNPDLKARESESFDLSVEFYPTDG--MVSL 685
Cdd:COG1629 405 FSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYAN-------GTDPYSVGNPDLKPETSTNYELGLRYRLLDGrlSLSL 477

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 686 AVFSKDIKNEIFTlssserldVGRGVETVLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGFNGNVTWLDTEFTFRT 765
Cdd:COG1629 478 ALFYSDVDNEILS--------VPLPNDSGFSTYYTNAGKARSYGVELELSYQLT------PGLSLNASYSYTDAKFDDDT 543

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 766 STGPRVTG--LFQQPEITTNAAVYYQRGP-FEARVSHNYIGGQLETindaNVNSDQYWKGRHVFDASLSWRWNKHLSLFV 842
Cdd:COG1629 544 DGSADLDGnrLPGVPPLTANLGLTYEFPGgWSLGLGVRYVGDRYLD----DANTQGAPGGYTLVDLGAGYRFGDNLTLSL 619


                ....*...
gi 13422423 843 EGQNLSNT 850
Cdd:COG1629 620 GVDNLFDK 627

TonB_dep_Rec

pfam00593

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

396-880

2.93e-46

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 173.03 E-value: 2.93e-46

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   396 NHSVEFRTVDAQGANYAFTYDTTNRLFPTFNPVNEAALRNPANYVLQQHRDALTKTNESTTQARLDLAFDDDAHW--KLK 473
Cdd:pfam00593   3 QLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlsTLR 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   474 FGGVLRSSERDFRNSQVNYRAATGFVYTLAEVDKAGPSQLIAGRYRLDPRI----DAEAATAFFRANRGRFTTTVSAPTG 549
Cdd:pfam00593  83 LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLllgvELRTAGLDYRRLDDDAYDPYDPANP 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   550 NYDVSEDVQ----AGYAQASYQFGD-LTLLGGLRYERTKVTSDAVRNTGGvltpvSNDGSYANWLPSLHLQWKPRPDLIV 624
Cdd:pfam00593 163 SSSSYSDTTtdsyGLYLQDNIKLTDrLTLTLGLRYDHYSTDGDDGNGGGD-----NFSRSYSAFSPRLGLVYKPTDNLSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   625 RAAWTNTIGRPDYGSLAATenlNFDGSQPTLSRGNPDLKARESESFDLSVEFYPTDGMVSLAVFSKDIKNEIFTLSSSer 704
Cdd:pfam00593 238 YASYSRGFRAPSLGELYGS---GSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDG-- 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   705 ldvgrGVETVLISTPRNAETAKIKGVEFAVQQAFtflpapLDGFGFNGNVTWLDTEFTFRTSTGPrvTGLFQQPEITTNA 784
Cdd:pfam00593 313 -----PGLGGTVYTYTNVGKARIRGVELELSGRL------WGLGLSGGGYTYTDADDDADADDTG--NPLPNVPRHTANL 379

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   785 AVYY--QRGPFEARVSHNYIGGQleTINDANVNSDQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGPGRRY 862
Cdd:pfam00593 380 GLTYdfPLGGWGARLGARYVGSG--ERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGN 457

                         490
                  ....*....|....*...
gi 13422423   863 LQEWANYGRTYWVGAAVN 880
Cdd:pfam00593 458 LGGYPGPGRTFYLGLSYK 475

PRK10064

catecholate siderophore receptor CirA; Provisional

32-183

1.73e-08

catecholate siderophore receptor CirA; Provisional

Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 58.36 E-value: 1.73e-08

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   32 GLLATSALCA-PMVALAQDAttvDAVVITGQREAQRAAivvkrEAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMED 110
Cdd:PRK10064  11 GLCASAISCAwPVLAVDDDG---ETMVVTASAVEQNLK-----DAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNE 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13422423  111 QGEPRFPVIRGLRSTYNRTTIDGALVASVDESGRTVPMDI--VPSVMAGRLEVIKTVTPENDG-NAIGGVINVTTR 183
Cdd:PRK10064  83 GDNRKGVSIRGLDSSYTLILIDGKRVNSRNAVFRHNDFDLnwIPVDAIERIEVVRGPMSSLYGsDALGGVVNIITK 158

Name

Accession

Description

Interval

E-value

TonB-Xanth-Caul

TIGR01782

TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...

53-881

0e+00

Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 789.22 E-value: 0e+00

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423    53 VDAVVITGQREAQRAAIVVKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEPRFPVIRGLRSTYNRTTID 132
Cdd:TIGR01782   1 LDAVQVTGQRASLEKAIDAKRDADSVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVSVRGLGPSYNRTTLN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   133 GALVASVDESGRTVPMDIVPSVMAGRLEVIKTVTPENDGNAIGGVINVTTRSAFDAKRPFFNGMASYGQYERSGDvrnDK 212
Cdd:TIGR01782  81 GRTIASTDSGGRAFSLDLLPSELVSGVEVYKTPTADMDEGGIGGTVDLRTRSPFDYDGRTLSGSAQGGYNDLAGK---DK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   213 PSYRLAFAAGRTFGaEDQWGVVIGASHEQLDYDIPQVEAADPsvREYTAAGAPvlsgsptGNGLQVPTQVRLFWYNNTKQ 292
Cdd:TIGR01782 158 PGPRGAASYSWTFG-DGQFGVLLSASYQKRDFAEDNVETENW--GTYTSADGG-------AQGLYFPRGVRYRSYRNDRE 227

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   293 RSGVNAKLEYRPSDAFRWDASVLASRMEDDEERIEYRIEPLGN-----VANQTPTSGAFTRG-----RGIIHLNQPITTR 362
Cdd:TIGR01782 228 RKGVNGSLQWRPSDALELYLDTLYSKYDDDETRQQIEFRTLNGgstviTSNQTATSGALVQGtvanlQILVEARYNEEKE 307

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   363 EIGLARTGFAWSFaPNWKLDGDLVYSLAGLKVPNHSVEFRTvdAQGANYAFTYDTTNRLFPTFNPVNEAALR--NPANYV 440
Cdd:TIGR01782 308 TTTSLTLGGEWTG-DRWTLDGDLGYSKATRDRPDRVTRFFT--APTPGYDFDYRGGPTLTLGTPADGDDASNytNPANGE 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   441 LQQHRDALTKTNESTTQARLDLAFDDDaHWKLKFGgvLRSSERDFRNSQVNYRA-------ATGFVYTLAEVDKAGPSQL 513
Cdd:TIGR01782 385 LRRTQISYQKAEDSEDAAQLDATFDGP-FTSLKFG--VRYRRRDKTNRGSRYRRsiigatgASGLAGVPSDLAGAGLDGG 461

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   514 IAGRYRLDPRIDAEAATAFFRANRGRFTTTVSAPT--GNYDVSEDVQAGYAQASYQFG-DLTLLGGLRYERTKVTSDAVR 590
Cdd:TIGR01782 462 LGGPLTGWDPADLDAFLNAARGDAAGGGTYTYASTapNTYTVTEDTTAAYAMANFDTGlRLRGNVGVRYERTDQTSDGWQ 541

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   591 N------TGGVLTPVSNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATENLNFDGS--QPTLSRGNPDL 662
Cdd:TIGR01782 542 SqpaangTGSVLVPVSADRDYTDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTSLSDDGTggTVTVSGGNPDL 621

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   663 KARESESFDLSVEFYP-TDGMVSLAVFSKDIKNEIFTLSSSERLDVGRG--VETVLISTPRNAETA-KIKGVEFAVQQAF 738
Cdd:TIGR01782 622 KPYESDNLDLSLEWYFgPGGLLSAAVFYKDIKNFIVTTTSTETNDGGGGlvVAGVLVSRPVNGGKAgKIRGVELGYQQTF 701

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   739 TFLPAPLDGFGFNGNVTWLDTEFTFRTST-GPRVTGLFQQPEITTNAAVYYQRGPFEARVSHNYIGGQLETINDANVN-S 816
Cdd:TIGR01782 702 DFLPGPLSGFGVQANYTYVDSEADPSVDGvQRRKLPLPGLSKNTANATLYYEKGGFSARLSYNYRSDYLLDVGGSNINrL 781

                         810       820       830       840       850       860
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 13422423   817 DQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGpGRRYLQEWANYGRTYWVGAAVNF 881
Cdd:TIGR01782 782 DRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTG-GKQRPREYVETGRTYMLGLRYKF 845

ligand_gated_channel

cd01347

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...

78-881

3.03e-98

Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 320.55 E-value: 3.03e-98

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  78 VSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQ-GEPRFPVIRGLRSTYNRTTIDGALVASvDESGRTVPMDIVPSVMA 156
Cdd:cd01347   1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGgGGGSTISIRGFGPDRTLVLVDGLPLAS-SNYGRGVDLNTIPPELI 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 157 GRLEVIKTVTP-ENDGNAIGGVINVTTRSAFDakrpFFNGMASYGQYERsgdvrNDKPSYRLAFAAGRTFGAEDQWGVVI 235
Cdd:cd01347  80 ERVEVLKGPSSaLYGSGAIGGVVNIITKRPTD----EFGGSVTAGYGSD-----NSGSSGGGGFDVSGALADDGAFGARL 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 236 GASHEQLDYDIPQVEAADPSVREytaagapvlsgsptgnglqvptqvrlfwynntkqRSGVNAKLEYRPSDAFRWDASVL 315
Cdd:cd01347 151 YGAYRDGDGTIDGDGQADDSDEE----------------------------------RYNVAGKLDWRPDDDTRLTLDAG 196

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 316 ASRMEDDEERIEYRIEPLGNVANQTPTSgaftRGRGIIHLNQPITTREIGLARTGFAWSFApNWKLDGDLVYSlaglkvp 395
Cdd:cd01347 197 YQDQDADGPGGTLPANGTGSSLGGGPSS----NTNGDRDWDYRDRYRKRASLGLEHDLNDT-GWTLRANLSYS------- 264

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 396 nhsvefrtvdaqganyaftYDTTNRLFPTFNPVNEAALRNPANYVLQQHRDaltkTNESTTQARLDLAFDDDA-HWKLKF 474
Cdd:cd01347 265 -------------------YTDNDGDPLILNGGNNAAGGDLGRSGYSSERD----TTQLGFDAGLNAPFGTGPvAHTLTL 321

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 475 GgvlrsserdfrnsqVNYRaatgfvytlaevdkagpsqliagryrldpridaeaataffranrgrftttvsaptgNYDVS 554
Cdd:cd01347 322 G--------------VEYR--------------------------------------------------------REELD 331

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 555 EDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDAVRNTggvltPVSNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIG 633
Cdd:cd01347 332 EKQTALYAQDTIELTDdLTLTLGLRYDHYDQDSKDTIAG-----GTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFR 406

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 634 RPDYGSLAATENLnfdgsQPTLSRGNPDLKARESESFDLSVEFYP-TDGMVSLAVFSKDIKNEIFTLSSSERLdvgrgve 712
Cdd:cd01347 407 APSLGELYGGGSH-----GGTAAVGNPNLKPEKSKQYELGLKYDPgDGLTLSAALFRIDIKNEIVSTPTNTGL------- 474

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 713 tVLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGFNGNVTWLDTEFTfRTSTGPRVTGLFQQPEITTNAAVYYQRGP 792
Cdd:cd01347 475 -GLVTVYVNGGKARIRGVELEASYDLT------DGLGLTGSYTYTDTEVK-RTDGATTGNRLPGIPKHTANLGLDYELPD 546

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 793 --FEARVSHNYIGGQleTINDANVNSDQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGPGRRYLQEWANYG 870
Cdd:cd01347 547 egLTAGGGVRYRGKQ--YADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSVRGSGLYGYYGPG 624

                       810
                ....*....|.
gi 13422423 871 RTYWVGAAVNF 881
Cdd:cd01347 625 RTYYLSVSYKF 635

CirA

COG1629

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

53-850

1.47e-58

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];

Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 212.00 E-value: 1.47e-58

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  53 VDAVVITGQREAQRaaivvKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEPRFPVIRGLRSTYNR--TT 130
Cdd:COG1629   1 LEEVVVTATRTDES-----LQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGGGNRvlVL 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 131 IDGalVASVDESGRTVPMDIVPSVMAGRLEVIK-TVTPENDGNAIGGVINVTTRSAFDAKRPFFNGMA-SYGQYERSGDV 208
Cdd:COG1629  76 VDG--VPLNDPSGGDGGLSYIDPEDIERVEVLRgPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYgSYGTYRASLSL 153

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 209 RndkpsyrlafaagrtfGAEDQWGVVIGASHEQLDYdipqveaadpsvreytaagapvlsgsptgnglqvptqvrlFWYN 288
Cdd:COG1629 154 S----------------GGNGKLAYRLSASYRDSDG----------------------------------------YRDN 177

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 289 NTKQRSGVNAKLEYRPSDAFRWDASVLASRMEDDEerieyriePLGNVANQTPTSGAFTRGRGIIHLNQPITTREIGLAR 368
Cdd:COG1629 178 SDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDS--------PGYLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLS 249

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 369 TGFAWsFAPNWKLDGDLVYSLaglKVPNHSVEFRTVDAQGANYAFTYDTTNRLfptfnpvneaalrnpanyvlqqhrdal 448
Cdd:COG1629 250 LEYEH-LGDGLKLSASAYYRY---DDTDLDSDFTPTPADGGTLEQTDFDNRTY--------------------------- 298

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 449 tktnesTTQARLDLAFDDDAHWKLKFGGVLRSSERDFRNSQVNYraatgfvytlaevdkagpsqliagryrldpridaea 528
Cdd:COG1629 299 ------GLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDL------------------------------------ 336

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 529 ataffranrGRFTTTVSAPTGNYDVSEDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDavrNTGGVLTPVSNDGSYAN 607
Cdd:COG1629 337 ---------GSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDkLTLTAGLRYDYVSYDVD---DTVTGTDSASGSRSYSA 404

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 608 WLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATenlnfdgSQPTLSRGNPDLKARESESFDLSVEFYPTDG--MVSL 685
Cdd:COG1629 405 FSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYAN-------GTDPYSVGNPDLKPETSTNYELGLRYRLLDGrlSLSL 477

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 686 AVFSKDIKNEIFTlssserldVGRGVETVLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGFNGNVTWLDTEFTFRT 765
Cdd:COG1629 478 ALFYSDVDNEILS--------VPLPNDSGFSTYYTNAGKARSYGVELELSYQLT------PGLSLNASYSYTDAKFDDDT 543

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 766 STGPRVTG--LFQQPEITTNAAVYYQRGP-FEARVSHNYIGGQLETindaNVNSDQYWKGRHVFDASLSWRWNKHLSLFV 842
Cdd:COG1629 544 DGSADLDGnrLPGVPPLTANLGLTYEFPGgWSLGLGVRYVGDRYLD----DANTQGAPGGYTLVDLGAGYRFGDNLTLSL 619


                ....*...
gi 13422423 843 EGQNLSNT 850
Cdd:COG1629 620 GVDNLFDK 627

FepA

COG4771

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...

28-841

8.54e-52

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];

Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 191.99 E-value: 8.54e-52

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  28 TLITGLLATSALCA-PMVALAQDATTVDAVVITGQREAQRAaivvkREAFVVSDVVSADDIGKLPDHNTAAALRRIPGIS 106
Cdd:COG4771   1 LLLASLLLLLALAAqAADALAEDATELEEVVVTATRTEQSL-----SDAPASVSVITAEEIEKLGATDLADALRLLPGVS 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 107 VMEDQGEPRF--PVIRGLRSTYNRTTIDGALVASVDESGRtVPMDIVPSVMAGRLEVIKTVTP-ENDGNAIGGVINVTTR 183
Cdd:COG4771  76 VTRSGGRGGSsgISIRGLGGDRVLVLIDGVPVNNPALGGG-GDLSYIPPDDIERIEVIRGPASaLYGSDAIGGVINIITK 154

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 184 SAFDAKRPFFNgmASYGQYERSgdvrndkpSYRLAFAAGrtfGAEDQWGVVIGASHEQLDYdipqveaadpsVREYTAAG 263
Cdd:COG4771 155 KPTDELEGSVS--LGYGSNGNG--------TYSGSLSLG---GPGDKLSFLLSGSYRDRDG-----------YLDYRNGG 210

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 264 apvlsgsptgnglqvptqvrlFWYNNTKQRSGVNAKLEYRPSDAFRWDASVLASRmEDDEERIEYRIEPLGNVANQTPTS 343
Cdd:COG4771 211 ---------------------FVGNSGYERYNLNAKLGYRLSDNHRLSLSGGYSR-QDRDGGPPTLGDTEISSDNAGDRD 268

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 344 GAFTRGRgiihlnqpittreiglarTGFAWSFAPNWKLDGDLvyslaglkvpnhsvefrtvdaqganyafTYDTTNRlfp 423
Cdd:COG4771 269 TTTDRGN------------------YSLRYNGDLGDNLDLSL----------------------------YYSRTDR--- 299

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 424 tfnpvneaalrNPANYVLQQHRDALTKTNESTTQARLDLAFDDDAHWKLKFGGvlrsserDFRNSQVNYraatgfvytla 503
Cdd:COG4771 300 -----------DSTNGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNHTLTLGA-------EYRYDDLDS----------- 350

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 504 evdkagpsqliagryrldpridaeaataffranrgrftttvSAPTGNYDVSEDVQAGYAQASYQFGD-LTLLGGLRYERT 582
Cdd:COG4771 351 -----------------------------------------SSFLGGADASRDTYGLFAQDEWKLTDkLTLTAGLRYDYY 389

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 583 KVTsdavrntggvltpvsNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLaateNLNFDGSQPTLSRGNPDL 662
Cdd:COG4771 390 STF---------------GASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAEL----YGSGTGTPGRYVLGNPDL 450

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 663 KARESESFDLSVEFYPTDG--MVSLAVFSKDIKNEIFTlssserldVGRGVETVLISTPRNAETAKIKGVEFAVQQAFTf 740
Cdd:COG4771 451 KPETSDNYELGLEYRLGNGglSLSLTGFYTDIKDLIVL--------VPVGPGPGDVLQYENVGKARTYGLELELKYRLG- 521

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 741 lpaplDGFGFNGNVTWLDTEFTFRTSTGPrvtgLFQQPEITTNAAVYYQRGP-FEARVSHNYIGGQLETINDAnvNSDQY 819
Cdd:COG4771 522 -----KGLTLTASYTYLDSKIDDGDTGEP----LPNVPPHKANLGLDYRLPKwWLLLLLTRYYGGRYVTPPSG--RLEGY 590

                       810       820
                ....*....|....*....|..
gi 13422423 820 WKGRHVFDASLSWRWNKHLSLF 841
Cdd:COG4771 591 TPGYTLLDLRASYKLTKNLTLS 612

TonB_dep_Rec

pfam00593

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

396-880

2.93e-46

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.

Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 173.03 E-value: 2.93e-46

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   396 NHSVEFRTVDAQGANYAFTYDTTNRLFPTFNPVNEAALRNPANYVLQQHRDALTKTNESTTQARLDLAFDDDAHW--KLK 473
Cdd:pfam00593   3 QLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWlsTLR 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   474 FGGVLRSSERDFRNSQVNYRAATGFVYTLAEVDKAGPSQLIAGRYRLDPRI----DAEAATAFFRANRGRFTTTVSAPTG 549
Cdd:pfam00593  83 LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLllgvELRTAGLDYRRLDDDAYDPYDPANP 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   550 NYDVSEDVQ----AGYAQASYQFGD-LTLLGGLRYERTKVTSDAVRNTGGvltpvSNDGSYANWLPSLHLQWKPRPDLIV 624
Cdd:pfam00593 163 SSSSYSDTTtdsyGLYLQDNIKLTDrLTLTLGLRYDHYSTDGDDGNGGGD-----NFSRSYSAFSPRLGLVYKPTDNLSL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   625 RAAWTNTIGRPDYGSLAATenlNFDGSQPTLSRGNPDLKARESESFDLSVEFYPTDGMVSLAVFSKDIKNEIFTLSSSer 704
Cdd:pfam00593 238 YASYSRGFRAPSLGELYGS---GSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDG-- 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   705 ldvgrGVETVLISTPRNAETAKIKGVEFAVQQAFtflpapLDGFGFNGNVTWLDTEFTFRTSTGPrvTGLFQQPEITTNA 784
Cdd:pfam00593 313 -----PGLGGTVYTYTNVGKARIRGVELELSGRL------WGLGLSGGGYTYTDADDDADADDTG--NPLPNVPRHTANL 379

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   785 AVYY--QRGPFEARVSHNYIGGQleTINDANVNSDQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVTGPGRRY 862
Cdd:pfam00593 380 GLTYdfPLGGWGARLGARYVGSG--ERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGN 457

                         490
                  ....*....|....*...
gi 13422423   863 LQEWANYGRTYWVGAAVN 880
Cdd:pfam00593 458 LGGYPGPGRTFYLGLSYK 475

FecA

COG4772

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];

33-881

6.23e-35

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];

Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 142.37 E-value: 6.23e-35

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  33 LLATSALCAPMVAlAQDATTVDAVVITGQREAQRAAIVVKREAfvvsDVVSADDIGKLPDHNTAAALRRIPGISVMEDQG 112
Cdd:COG4772   4 ALAAALLLAAAAA-AEAATTLETVVVTGSRAAEARLKDVPGSV----SVVDREELENQAATSLREVLRRVPGVNVQEEDG 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 113 EPRFPVI--RGL---RSTynRTTI--DGALVAS---VDESGRTVPmdivPSVMAGRLEVIKtvtpendG--------NAI 174
Cdd:COG4772  79 FGLRPNIgiRGLgprRSR--GITLleDGIPIAPapyGDPAAYYFP----DLERMERIEVLR-------GaaalrygpQTV 145

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 175 GGVINVTTRSAFDAkrPFFNGMASYGQYersgdvrndkPSYRLAFAAGRTFGaedQWGVVIGASHEQLDydipqveaadp 254
Cdd:COG4772 146 GGAINFVTRTIPTA--FGGELRVTGGSF----------GYRRTHASVGGTVG---NFGYLVEYSRKRGD----------- 199

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 255 SVREYTAAgapvlsgsptgnglqvptqvrlfwynntkQRSGVNAKLEYRPSDAFRWDASVLASRMEDDEerieyriePLG 334
Cdd:COG4772 200 GFRDNSGF-----------------------------DINDFNAKLGYRLSDRQELTLKFQYYDEDANT--------PGG 242

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 335 nvanQTPT---SGAFTRGRGIIHLNQPITtreigLARTGFAWSFAPNWKLDGDLVYSLAGLkvpNHSveFRTVDAQGANY 411
Cdd:COG4772 243 ----LTDAqfdADPRQSYRPADQFDTRRT-----QLSLRYEHQLSDNTTLTTTAYYNDFSR---NWY--IRQNTADPNTP 308

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 412 AFTYDTTNRLFPTFnpvneaalrnpanyvlqqhrdaltktnesTTQARLDLAFD-DDAHWKLKFGG-VLRSSERDFRNSQ 489
Cdd:COG4772 309 GLGLRGNPRGYRSY-----------------------------GIEPRLTHRFElGGVPHTLEVGLrYHREEEDRKQYVN 359

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 490 VNYRAATGFVYTLAEVDKAgpsqliagryrldpridaeaaTAFfranrgrftttvsaptgnydvsedvqAGYAQASYQF- 568
Cdd:COG4772 360 TYGQGRSGAGLRRDRRFSA---------------------DAL--------------------------AAYAQNRFELt 392

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 569 GDLTLLGGLRYERTKVTSDAVRNTGGVlTPVSNDGSYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAatenlnf 648
Cdd:COG4772 393 GRLTLTPGLRYEHIRRDRTDRYSTRTG-GDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLA------- 464

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 649 dgsqpTLSRGNPDLKARESESFDLSVEFYPTDGM-VSLAVFSKDIKNEIFTLSSSerldvgrgveTVLISTPRNAETAKI 727
Cdd:COG4772 465 -----YGNGGNPDLKPEKSWNYELGTRGRIGNGLsAEVALFYIDYDNELGSCSAA----------GGDRSTFTNAGETRH 529

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 728 KGVEFAVqqAFTFLPAPLDGFGFNGNVTWLDteFTFRTSTGP-----RVTGLfqqPEITTNAAVYYQRGPFEARVSHNYI 802
Cdd:COG4772 530 QGLELAL--DYDLLKGGGLGLPLFAAYTYTD--AEFTSDFGPvfagnRLPYV---PRHQLTAGLGYEHGGWTANLNGRYV 602

                       810       820       830       840       850       860       870       880
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 803 GGQLetINDAN-VNSDQYWK--GRHVFDASLSWRWNKHLSLFVEGQNLSN----TGRQEVTGPGRRylqewANYGRTYWV 875
Cdd:COG4772 603 SEQF--TDAANtVADGSFGKipSYTVLDLSASYDFGKNLSLFAGVNNLFDkryiASRAPNYAAGIR-----PGPPRTVYA 675


                ....*.
gi 13422423 876 GAAVNF 881
Cdd:COG4772 676 GLRLKF 681

Fiu

COG4774

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];

80-881

5.46e-21

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];

Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 98.41 E-value: 5.46e-21

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  80 DVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEPR-FPVIRGLRSTYNrTTIDGAlvasvdesgRTVPMDIVPSVMAGR 158
Cdd:COG4774  14 TVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGdSFSIRGFSASGD-IYVDGL---------RDPGQYRRDTFNLER 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 159 LEVIKtvtpendG--------NAIGGVINVTTRSAFDakRPFFNGMASYGQYERsgdvrndkpsYRLAFAAGRTFGaeDQ 230
Cdd:COG4774  84 VEVLK-------GpasvlygrGSPGGVINLVTKRPTD--EPFTEVTLTYGSDGQ----------RRATLDVNGPLG--DD 142

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 231 WGVVIGASHEQLDYdipqveaadpsvreytaagapvlsgsptgnglqvptqvrlFWYNNTKQRSGVNAKLEYRPSDAFRW 310
Cdd:COG4774 143 LAYRLNGMYRDSDS----------------------------------------YRDGVDNDRWGIAPSLTWRLGDRTRL 182

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 311 DASVLASrmedDEERIEYRIEPLgnVANQTPTSGAFTRGrgiihLNQPI--TTREIGLARTGFAWSFAPNWKLDGDLVYS 388
Cdd:COG4774 183 TLDYEYQ----DDDRTPDYGVPA--VANGRPVDVDRSTF-----YGQPDdySDSETDSATLRLEHDFNDNWTLRNALRYS 251

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 389 laglkvpNHSVEFRTVDAQGANYAFTYDTTNRLFPTfnpvneaalrnpanyvlqqhrdaltktNESTTQARLDLAfddda 468
Cdd:COG4774 252 -------DYDRDYRNTYPTGGNATGTVTRSAYRRDQ---------------------------DNDTLSNQTDLT----- 292

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 469 hWKLKFGGVlrsserdfrnsqvNYRAATGFVYTLAEVDkagpsqliAGRYRLDPRIdaeAATAFFRANRGRFTTTVSAPT 548
Cdd:COG4774 293 -GKFDTGGV-------------KHTLLAGVEYSREDSD--------NARYSGGGTA---PTVNLYNPVYGAPVTGPTLGG 347

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 549 GNYDVSEDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDAvRNTGgvltPVSNDGSYANWLPSLHLQWKPRPDLIVRAA 627
Cdd:COG4774 348 ADNDSRTDTTGLYLQDTISLTDrWSLLAGLRYDRFDTDYTD-RTTG----ATTSSYDDSAFSPRAGLVYKPTPNLSLYAS 422

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 628 WTNtigrpdygSLAATenlnfdGSQPTLSRGNPDLKARESESFDLSVEFYPTDG--MVSLAVFSKDIKNEIFTlssserl 705
Cdd:COG4774 423 YST--------SFNPG------GGAPSLSNAGQALDPEKSRQYEVGVKWDLLDGrlSLTAALFRIEKTNVRTT------- 481

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 706 DVGRGVETVLISTPRNaetakiKGVEFAVQQAFTflpaplDGFGFNGNVTWLDTEFTfrTSTGPRVTG--LFQQPEITTN 783
Cdd:COG4774 482 DPANPGVYVQTGEQRS------RGVELEATGELT------PGWSVLAGYTYLDAEIT--KSANAANVGnrLPNVPRHSAS 547

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 784 AAVYYQ--RGPFEARVSHNYIGGQleTINDANVNS-DQYWkgrhVFDASLSWRWNKHLSLFVEGQNLSNtgrqevtgpgR 860
Cdd:COG4774 548 LWTTYDlpLPGLTLGGGVRYVGSR--YADAANTVKlPSYT----RFDAGASYRLNKNLTLRLNVNNLTD----------K 611

                       810       820
                ....*....|....*....|....*...
gi 13422423 861 RYLQEWANY-------GRTYWVGAAVNF 881
Cdd:COG4774 612 RYYASAYGSgyvtpgaPRTVLLSASYRF 639

TonB-hemlactrns

TIGR01786

TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ...

54-881

1.27e-20

TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]

Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 97.48 E-value: 1.27e-20

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423    54 DAVVITGQREAQRAAIVVKREAFVVSdVVSADDIGKLPDHNTAAALRRIPGISVmedQGEPRFPV----IRGLRSTYNRT 129
Cdd:TIGR01786   1 DTITVTATRTADPQRRDLSVTPASVS-VISREQLKSQQVRNLRDLLRYEPGVSV---VEGGRGGSqginIRGLDKNRVAV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   130 TIDGALVASVDESGRTV--PMDIVPSVMAGRLEVIKTVTPENDGN-AIGGVINVTTRSAFDAKRPffnGMASYGQYERSG 206
Cdd:TIGR01786  77 LVDGIRQNTSYGGQGSTfyAINSIDPELIKSIEIVKGASSSLYGSgALGGVVAFRTKDAADLLKP---GKDLGGLSKLGY 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   207 DVRNDkpSYRLAFAAgrtFGAEDQWGVVIGASHEQLDydipqveaadpsvrEYTAAgapvlsgspTGNGLQVPTQVRLFW 286
Cdd:TIGR01786 154 SSANN--RFTQSVAA---AGRNDDVDALVQATYRRGH--------------ELKNG---------NKANIGNESKRSKPN 205

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   287 YNNTKQRSGVnAKLEYRPSDAFRWDASVLASRMEDDEERIEYRIEPLGNVANQTPTSGaftrgrgiihlnQPITTREIGL 366
Cdd:TIGR01786 206 PSDYKSQSFL-AKLGWQLNDAHRLGLSLEYTQTDYDEPEMTNTSYLTKPLGAPLLSST------------VVLGDSKTRD 272

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   367 ARTGFAWSFAPN--WKLDGDLVYSLAGLKVPNHSVEFRTVDAQGANYaftydttnrlfptfnpvneaalrnpaNYVLQQH 444
Cdd:TIGR01786 273 RRTGLDYELNPDnsWLDTVKLALDKQYIQLYNYLNATSASDYPGVDK--------------------------NGRYKDK 326

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   445 RDALTKTNEsttqARLDLAFDDDAHwKLKFGGvlrsserDFRNSQVNYRaatgfvytlaevdkAGPSQLIAGRYRLDpri 524
Cdd:TIGR01786 327 YDYYTLGFD----TNNKIEFSVHSL-SLTYGL-------DRFKDKVSTG--------------DSRRNLPTAAYNLY--- 377

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   525 daeaatAFFRANRgrftttvsaptgnyDVSEDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDAVRNTGgvltPVSNDG 603
Cdd:TIGR01786 378 ------GYEGENR--------------PVKGSNFGLFLQDNIKLGDwLSLSAGLRYDHYKTDPKADESKD----YGAISK 433

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   604 SYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATENLNFDGSQPTLsrGNPDLKARESESFDLSVEFYPTDGMV 683
Cdd:TIGR01786 434 TYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELYGTGAHPGGGPYTFL--PNPNLKPETSKNWEIGINLHFDQLDF 511

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   684 SLAVFSKDIKNEIFTLSSSERLDVGRGVETVLISTPRNAETAKIKGVEFAVQQAFTFLPAPLDGFGFNGNVTWLDTEftf 763
Cdd:TIGR01786 512 KVSYFRNDYKDFIDLGIGVTAKGNMAQVGSNTITNYVNIDNARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYTKGK--- 588

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   764 RTSTGPRVTGLfqQP-EITTNAAVYYQRGPFEARVSHNYIGGQLETINDANVNSDQY--------WKGRHVFDASLSWRW 834
Cdd:TIGR01786 589 DSDTNPWLNAI--TPlKVVLGLGYDHPDEKWGVGLTLTFSGAKDAVDAYATYYENGEaakagplrTPSYTVVDLYGYYKP 666

                         810       820       830       840       850       860
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   835 NKHLSLFVEGQNLSNtgrqevtgpgRRYLqEWANY-------------GRTYWVGAAVNF 881
Cdd:TIGR01786 667 NKNLTLRFGVYNLLD----------RKYT-TWESArqagplatgytapGRNYKASVEYKF 715

TonB-hemin

TIGR01785

TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...

54-881

1.57e-19

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]

Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 93.61 E-value: 1.57e-19

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423    54 DAVVITGQREAQRaaivVKREAFVVSdVVSADDIGKLPDHNTAAALRRIPGISVmedQGEPRFPV----IRGLRSTYNRT 129
Cdd:TIGR01785   2 DTVTVTATRTRQV----LSEAPASVS-VISGEQIESKQANNLADALNTVPGVDV---TGGGRPPGqsinIRGLQDNRVLV 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   130 TIDGALVASVDESGR----TVPMDivpsvMAGRLEVIKTVTPENDG-NAIGGVINVTTRSAFDAKRPffnGMASYGQYER 204
Cdd:TIGR01785  74 VVDGARQNYQRGGAHngslFVDPE-----LLKRIEIVKGPSSSLYGsGALGGVVAFRTKDAADLLRP---GQLFGGLAKL 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   205 SGDVRNDkpSYRLAFAAGRTFGaeDQWGVVIGASHEQLDydipqveaadpsvrEYTaagapvlsgspTGNGLQVPTQVrl 284
Cdd:TIGR01785 146 SYGSNNN--SFGGSVAVAGRLD--DNLDALVAATYRDGG--------------NYR-----------NGNKEEATNSA-- 194

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   285 fwynnTKQRSGVnAKLEYRPSDAFRWDASVLASRMEDDEerieyrieplgnvANQTPTSGAFTRGRGIIHLNQPITTREI 364
Cdd:TIGR01785 195 -----YVQKNLL-AKLGWQLDDAQRLEFSYFTTEGSLDE-------------AQNSGPGTEYVLGSSSTLLASSTRDRSA 255

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   365 GLArtgfaWSFAPNWKLDGDLVYSLAGLKVPNHsvEFRTVDAQGANYAFTYDTtnrlfptfnpvNEAALRNpanyvlqqh 444
Cdd:TIGR01785 256 TLT-----YNWTPEDNPWLDATASLYYNRTEND--NDRSARGVGREEGYQYTT-----------YGATLQN--------- 308

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   445 rdaltktnesttQARLDLAfdddAHWKLKFGGvlrsserDFRNSQVNYraatgfvytlaevdkagpsqliagrYRLDPRI 524
Cdd:TIGR01785 309 ------------TSRFDVA----SWSTLTYGV-------DWMKDKRRT-------------------------ESFDPNS 340

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   525 DAEAATAFFRANRGRFtttvsaptgnydvsedvqAGYAQASYQFGD--LTLLGGLRYERTKVTSDAVRNTGGVltpvsnD 602
Cdd:TIGR01785 341 VTTIVPNPPSAKEYFF------------------GLFLQDNIPLLDdrLTLSAGLRYDHYKLSPKTTADTEAV------D 396

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   603 GSYANWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATENlNFDGSQPTLSRGNPDLKARESESFDLSVE------F 676
Cdd:TIGR01785 397 RSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGD-HPGTPGGYTFAPNPNLKPETSKTWELGANlsfdnlL 475

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   677 YPTDGM-VSLAVFSKDIKNEIFtLSSSERLDVGRGVETvlISTPRNAETAKIKGVEFAVQQAFTFlpapldgFGFNGNVT 755
Cdd:TIGR01785 476 LDNDQLqFKVAYFYNDVKDFID-LTIGVTDNVTAGMNN--ITQYVNIDGARIRGIEASASYDAGL-------WATGLSYG 545

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   756 WLDTEftfRTSTGPrvtGLFQQP--EITTNAAVYYQRGPFEARVSHNYIGGQLETINDANVNSDQY--WKGRHVFDASLS 831
Cdd:TIGR01785 546 YTIGK---DQNTNQ---WLSNIPplKLVVTVGYRFPDRRLDLGAKAAYYERQSESPTTEDVAANGLltTPGYTVVDLYAT 619

                         810       820       830       840       850
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 13422423   832 WRWN--KHLSLFVEGQNLSNtgrqevtgpgrRYLQEWANY-----GRTYWVGAAVNF 881
Cdd:TIGR01785 620 YQPNavKGLTVRFGVNNLTD-----------RKYTPAQSVpgagpGRNFKGSVKYQF 665

OMP_b-brl_3

pfam14905

Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...

532-876

4.14e-18

Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.

Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 87.71 E-value: 4.14e-18

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   532 FFRANRGRFTTtVSAPTGNYDVSEDVQAGYAQASYQFGDLTLLGGLRYERTKVTSDAVRntggvlTPVSNDGSYANWLPS 611
Cdd:pfam14905  90 YENLDNGEWVP-DPSRSNDFDYKENIYAAYASYSKKFGKWSYQAGLRAEYTDIDGDSVT------TNETFKRNYFNLFPS 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   612 LHLQWKPRPDLIVRAAWTNT--IGRPDYGSLaateNLNFDGSQP-TLSRGNPDLKARESESFDLSvefYPTDGMVSLAVF 688
Cdd:pfam14905 163 ASLSYKLNDNNSLQLSLYYRriINRPSYWDL----NPFRNYSDPyNYSQGNPNLKPEYTNSFELG---YTYKWKLSLSLS 235

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   689 SKDIKNEIFTLSSSErldvgrGVETVLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGFNGNVTWldteFTFRTSTG 768
Cdd:pfam14905 236 YRYTNDVIQQTFITD------DNDNVTYTTYENLGKSNSYGLELSASFNPT------KWWSLNGNLNG----YYNKYKID 299

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   769 PRVTGLFQQPEITTNAAVYYQRG-PFEARVSHNYIGGQLETINDAnvnsdqywKGRHVFDASLSWR-WNKHLSLFVEGQN 846
Cdd:pfam14905 300 GSLNSDFSNFGFNWNLNNTFTLPkGWSLQLNGNYRSPRVTGQGKI--------KPFYSLDLGLSKSfLKKKLTLSLNVND 371

                         330       340       350
                  ....*....|....*....|....*....|...
gi 13422423   847 LSNTGRQEVT---GPGRRYLQEWANYGRTYWVG 876
Cdd:pfam14905 372 IFNTRKFRSTtnyDNGFIQSYNNKWDSRSVRLS 404

FhuE

COG4773

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...

33-881

1.01e-17

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];

Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 88.03 E-value: 1.01e-17

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  33 LLATSALCAP--------MVALAQDATTVDAVVITGQRE------AQRAAIVVK-----RE-AFVVSdVVSADDIGKLPD 92
Cdd:COG4773   4 LLAGSGLAAAaagalaqaAAAAAAEATTLPEVTVTGTAEgtggytAKSSSTATKldtplREtPQSVS-VVTRQLIEDQGA 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  93 HNTAAALRRIPGISVMEDQGEPR-FPVIRGLRStyNRTTIDGalVASVDESGRTVPMDIVpsvmaGRLEVIK-------- 163
Cdd:COG4773  83 TTLDDALRNVPGVTVSSYDGGGRdSFSIRGFSI--DNYLRDG--LPLGGFGGGQPDTANL-----ERVEVLKgpagllyg 153

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 164 TVTPendgnaiGGVINVTTRSAFDakRPFFNGMASYGQYERsgdvrndkpsYRLAFAAGRTFGAEDQWGVVIGASHEQLD 243
Cdd:COG4773 154 AGSP-------GGLVNLVTKRPTA--EPQGEVSLSAGSWDT----------YRATADVGGPLNEDGTLRYRLNAAYEDGD 214

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 244 YdipqveaadpsvreytaagapvlsgsptgnglqvptqvrlfWYNNTK-QRSGVNAKLEYRPSDAFRWdaSVLASRMEDD 322
Cdd:COG4773 215 S-----------------------------------------FRDGVDnRRTLIAPSLDWDLTDDTTL--TLGAEYQDDD 251

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 323 eerieyrieplgnvanQTPTSGAFTRGRGIIHL------NQPIT--TREIGLARTGFAWSFAPNWKLDGDLVYSlaglkv 394
Cdd:COG4773 252 ----------------STGDRGFLPLDGTLLDLprstnlGEPWDyyDTETTTLFAELEHRFNDDWSLRANARYS------ 309

                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 395 pnhsveFRTVDAQGANYAFTYDTTNRLFPtfnpvneaalRNPANYvlqqhrdaltktNESTTQARLDLafddDAHWKLKF 474
Cdd:COG4773 310 ------DSDRDGRSAYAYGAPDAATGTLT----------RYASAR------------DGDSRSDSLDA----NLNGKFET 357

                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 475 GGVlrsserdfRNsqvnyraatgfvytlaevdkagpsQLIAG----RYRLDPRIDAEAATAFFRANRGRFTTTvSAPTGN 550
Cdd:COG4773 358 GGL--------EH------------------------TLLVGadysRYDSDSDSATAGTINIYNPVYGNLPEP-DFDASD 404

                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 551 YDVSEDVQAGYAQASYQFGD-LTLLGGLRYERTKVTSDAVRNTggvltpVSNDGSYANWLPSLHLQWKPRPDLIVRAAWT 629
Cdd:COG4773 405 TDTTTRQTGLYAQDQISLTDrLSLLLGGRYDWYETDSTNRLGG------STTSYDDSAFTPRAGLVYDLTPGLSLYASYS 478

                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 630 NtigrpdygSLAATENLNFDGSQptlsrgnpdLKARESESFDLSV--EFYPTDGMVSLAVFskDIKNEIFTLSSSERLDV 707
Cdd:COG4773 479 E--------SFEPQSGADNNGNP---------LDPETGKQYEAGVkgELFDGRLNATLAVF--DITQKNVATTDPDNPNF 539

                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 708 GRGVETVlistprnaetaKIKGVEFAVQQAftflpaPLDGFGFNGNVTWLDTEFTFRTST--GPRVTGlfqQPEITTNAA 785
Cdd:COG4773 540 YVQVGEV-----------RSRGVELELSGE------LTPGLNLIAGYTYTDAKITKDADAleGKRLTN---VPRHTASLW 599

                       810       820       830       840       850       860       870       880
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 786 VYY--QRGPFE-----ARVshNYIGGQLetindANVNSDQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNtgrqevtgp 858
Cdd:COG4773 600 TTYrfPSGALKglglgGGV--RYVGERY-----GDAANTFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFD--------- 663

                       890       900
                ....*....|....*....|...
gi 13422423 859 gRRYLQEWANYGRtYWVGAAVNF 881
Cdd:COG4773 664 -KKYYASSGSRGY-VYYGAPRNV 684

BtuB

COG4206

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];

56-224

1.21e-16

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];

Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 81.07 E-value: 1.21e-16

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  56 VVITGQREAQRaaivvKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMED--QGEPRFPVIRGLRSTYNRTTIDG 133
Cdd:COG4206   1 VVVTATRLEQS-----KSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSggPGSAASISIRGLGSNQTLVLIDG 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423 134 alVASVDESGRTVPMDIVPSVMAGRLEVIKTVTPENDG-NAIGGVINVTTRSAFDAKRPFFN-GMASYGQYERSGDVRND 211
Cdd:COG4206  76 --VPLNDPSLGGVDLSLIPPDDIERIEVLKGAASALYGsDAIGGVINITTKKGKKGFKGSVSaSYGSFGTRRLSASLSGG 153

                       170
                ....*....|...
gi 13422423 212 KPSYRLAFAAGRT 224
Cdd:COG4206 154 AGKFSYSLSASYR 166

Plug

pfam07715

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...

72-177

6.08e-14

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.

Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 68.45 E-value: 6.08e-14

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423    72 KREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQ-GEPRFPVIRGLRSTYNRTTIDGalVASVDESGRTVPMDI 150
Cdd:pfam07715   2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGgGGGSSISIRGFGSNRVLVLVDG--VPLNSGGGGSVDLNS 79

                          90       100
                  ....*....|....*....|....*...
gi 13422423   151 VPSVMAGRLEVIK-TVTPENDGNAIGGV 177
Cdd:pfam07715  80 IDPEDIERVEVLKgPASALYGSGAIGGV 107

PRK10064

catecholate siderophore receptor CirA; Provisional

32-183

1.73e-08

catecholate siderophore receptor CirA; Provisional

Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 58.36 E-value: 1.73e-08

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   32 GLLATSALCA-PMVALAQDAttvDAVVITGQREAQRAAivvkrEAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMED 110
Cdd:PRK10064  11 GLCASAISCAwPVLAVDDDG---ETMVVTASAVEQNLK-----DAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNE 82

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 13422423  111 QGEPRFPVIRGLRSTYNRTTIDGALVASVDESGRTVPMDI--VPSVMAGRLEVIKTVTPENDG-NAIGGVINVTTR 183
Cdd:PRK10064  83 GDNRKGVSIRGLDSSYTLILIDGKRVNSRNAVFRHNDFDLnwIPVDAIERIEVVRGPMSSLYGsDALGGVVNIITK 158

PRK13484

IreA family TonB-dependent siderophore receptor;

37-183

9.58e-06

IreA family TonB-dependent siderophore receptor;

Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 49.24 E-value: 9.58e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   37 SALCAP--MVALAQDATTVDAVVITGQREAQRaaivvKREAFVVSDVVSADDIGKLPDHNTAAALRRIPGISVMEDQGEP 114
Cdd:PRK13484  12 AVMCSAviSSGYASSDKKEDTLVVTASGFTQQ-----LRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNEKP 86

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 13422423  115 RFpVIRGLRSTYNRTTIDGALVASVD---------ESGRTVPMDIVPsvmagRLEVIKTVTPENDG-NAIGGVINVTTR 183
Cdd:PRK13484  87 DI-SIRGLSGDYTLILVDGRRQSGREsrpngsggfEAGFIPPVEAIE-----RIEVIRGPMSSLYGsDAIGGVINIITK 159

PRK13484

IreA family TonB-dependent siderophore receptor;

658-868

1.16e-05

IreA family TonB-dependent siderophore receptor;

Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 49.24 E-value: 1.16e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  658 GNPDLKARESESFDLSVEFYPTDGM-VSLAVFSKDIKNEIFTLSSSERlDVGRGVETVLIStprNAETAKIKGVEFAVQq 736
Cdd:PRK13484 466 GNRDLKPETSVTEEIGIIYSNDSGFsASATLFNTDFKNKLTSYDIGTK-DPVTGLNTFIYD---NVGEANIRGVELATQ- 540

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  737 aftfLPApLDGFGFNGNVTWLDTEftfRTSTGPRVTG-------LFQQPEITTNAAV---YYQRGPFEArvSHNYIGGQL 806
Cdd:PRK13484 541 ----IPV-YDKWHVSANYTFTDSR---RKSDDESLNGkslkgepLERTPRHAANAKLewdYTQDITFYS--SLNYTGKQI 610

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  807 ETINDANVNSDQYWKGRHVFDASLSWRWNKH--LSLFV------EGQNLSNTGRQEVTGPGRRYlqeWAN 868
Cdd:PRK13484 611 WAAQRNGAKVPRVRNGFTSMDIGLNYQILPDtlINFAVlnvtdrKSEDIDTIDGNWQVDEGRRY---WAN 677

PRK13486

TonB-dependent receptor;

559-881

1.44e-05

TonB-dependent receptor;

Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 48.86 E-value: 1.44e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  559 AGYAQASYQFGD-LTLLGGLRYERTKVTsdavrntGGVLTPVSndgsyanwlpslHLQWKPRPDLIVRAAWTNTIGRPDY 637
Cdd:PRK13486 386 SVFAEDEWHLTDaLALTAGSRYEHHEQF-------GGHFSPRA------------YLVWDVADAWTLKGGVTTGYKAPRM 446

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  638 GSL-AATENLNFDGSQPTLsrGNPDLKARESESFDLSVEFYPTDGM-VSLAVFSKDIKNEIFTLSSSERldvgrgvetvl 715
Cdd:PRK13486 447 GQLhKGISGVSGQGKTNLL--GNPDLKPEESVSYEAGVYYDNPAGLnANVTGFMTDFSNKIVSYSINDN----------- 513

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  716 ISTPRNAETAKIKGVEFAvqqafTFLPAPLDGFGFNGNVTWLDTEFTFRTSTGprvTGLFQQPEITTNAAVYYQ------ 789
Cdd:PRK13486 514 TNSYVNSGKARLHGVEFA-----GTLPLWSEDVTLSLNYTWTRSEQRDGDNKG---APLSYTPEHMVNAKLNWQiteeva 585

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  790 -------RGPfEARVSHNY--IGGQLETINDanvNSDQYWKGRHVFDASLSWRWNKHLSLFVEGQNLSNTGRQEVT---- 856
Cdd:PRK13486 586 swlgaryRGK-TPRFTQNYssLSAVQKKVYD---EKGEYLKAWTVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSlysa 661

                        330       340       350
                 ....*....|....*....|....*....|....*
gi 13422423  857 GPGRRYLQEWANYG----------RTYWVGAAVNF 881
Cdd:PRK13486 662 GKSTLYAGDYFQTGssttgyvipeRNYWMSLNYQF 696

PRK10064

catecholate siderophore receptor CirA; Provisional

607-862

2.25e-05

catecholate siderophore receptor CirA; Provisional

Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 48.34 E-value: 2.25e-05

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  607 NWLPSLHLQWKPRPDLIVRAAWTNTIGRPDYGSLAATENLNFDGSQPTLSrGNPDLKARESESFDLSVEFYPTDGMV--- 683
Cdd:PRK10064 393 HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIV-GSPDLKPETSESWELGLYYMGEEGWLegv 471

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  684 --SLAVFSKDIKNEIFTLSSSER-----------LDVGRGVETVLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGF 750
Cdd:PRK10064 472 esSVTVFRNDVDDRISISRTSDVnaapgyqnfvgFETNGRGRRVPVFRYYNVNKARIQGVETELKIPFN------DEWKL 545

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  751 NGNVTWLDTeftfRTSTGPRVTGLFQQPEITTNAAVYYQRGPFEA---RVSHNYIGGQletinDANVNSDQYWKGRHVFD 827
Cdd:PRK10064 546 SLNYTYNDG----RDVSNGENKPLSDLPFHTANGTLDWKPLALEDwsfYVSGNYTGQK-----RADSATAKTPGGYTIWN 616

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 13422423  828 ASLSWRWNKHLSLFVEGQNLS----NTGRQEVTGPGRRY 862
Cdd:PRK10064 617 TGAAWQVTKDVKLRAGVLNLGdkdlSRDDYSYNEDGRRY 655

PRK13513

ligand-gated channel protein;

570-760

1.72e-04

ligand-gated channel protein;

Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 45.14 E-value: 1.72e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  570 DLTLLGGLRYertkvtsDAVRNTGGVLTPvsndGSYANWlpSLHLQWKPR---------PDL-IVRAAWTNTIGRpdygs 639
Cdd:PRK13513 377 DFALTGGIRM-------DQDQNYGTHWTP----RLYGVW--HLADQWTLKggvstgyrsPDLrQATDNWGQLTGG----- 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  640 laatenlnfdGSQPTLSRGNPDLKARESESFDLSVEFYPTDGM-VSLAVFSKDIKNEIF-----TLSSSERLDVGRGVET 713
Cdd:PRK13513 439 ----------GGLPALILGNSDLKPEKSISQEIGILWDNQENLnASVTLFNTDFKDKITevrncDTTNTDGQCVFNGINY 508

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 13422423  714 VLISTPRNAETAKIKGVEFAVQQAFTflpaplDGFGFNGNVTWLDTE 760
Cdd:PRK13513 509 DFISDRINVDKANMRGVEATFNWDIN------QAWSLATNYTFTQSE 549

PRK13483

ligand-gated channel protein;

25-183

2.84e-04

ligand-gated channel protein;

Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 44.77 E-value: 2.84e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   25 MSRTLITGLLATSALCAPMVALAQDATTVDA----VVITGQREAQraaivVKREAFVVSDVVSADDIGKLPDHNTAAALR 100
Cdd:PRK13483   1 MKKYLAQVISALCLLPAVFVTHALAQAAPDKtmetVVVTASGYEQ-----QIRDAPASISVITREDLENRFYRDLTDALL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  101 RIPGISVMeDQGEPRFPVIRGLRSTYNRTTIDGALVAS----VDESGRTVPMDIVPSVMA-GRLEVIKTVTPENDG-NAI 174
Cdd:PRK13483  76 DVPGVVVT-GGGDRTDISLRGMGSQYTLILVDGKRQSSretrPNSDGPGVEQAWTPPLAAiERIEVIRGPMSSLYGsDAI 154


                 ....*....
gi 13422423  175 GGVINVTTR 183
Cdd:PRK13483 155 GGVINIITR 163

PRK13513

ligand-gated channel protein;

26-207

8.22e-04

ligand-gated channel protein;

Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 43.22 E-value: 8.22e-04

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   26 SRTLITGLLATSALCAPMVALAQDATTVDAVVITG---QREAQRAAIVVKreafvvsdVVSADDIGKLPDHNTAAALRRI 102
Cdd:PRK13513   8 THKAALVIAAAISSQAYAAEKTNTATPTDTMVVTAsgfQQRIQDAPASIS--------VVTREQLENKAYRDVTDALKDV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  103 PGIsVMEDQGEPRFPVIRGLRSTYNRTTIDGALVASVD----------ESGRTVPMDIVPsvmagRLEVIKTVTPENDG- 171
Cdd:PRK13513  80 PGV-VVTGGGSTSDISIRGMAAKYTLILVDGKRVDTRStrpnsdgsgiEQGWLPPLAAIE-----RIEVVRGPMSSLYGs 153

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 13422423  172 NAIGGVINVTTRSAFDAKRPFFNGMASYGQYERSGD 207
Cdd:PRK13513 154 DAMGGVINIITRKVQKEWHGSLRADATLQEDSKSGD 189

btuB

PRK10641

TonB-dependent vitamin B12 receptor BtuB;

30-185

1.23e-03

TonB-dependent vitamin B12 receptor BtuB;

Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 42.29 E-value: 1.23e-03

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423   30 ITGLLATSAlcAPMVALAQDaTTVDAVVITGQREAQRAAIVVkreafVVSDVVSADDIGKLPDHNTAAALRRIPGISVME 109
Cdd:PRK10641   5 ASLLTALSV--TAFSGWAQD-TSPDTLVVTANRFQQPVSTVL-----APTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQ 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13422423  110 D----QGEPRFpvIRGLRSTYNRTTIDGALVASVDESGrTVPMDIVPSVMAGRLEVIKTVTPENDG-NAIGGVINVTTRS 184
Cdd:PRK10641  77 NgglgQLSSLF--IRGTNSSHVLVLIDGVRLNQAGISG-SADLSQIPISLVQRIEYIRGPRSAVYGsDAIGGVVNIITTR 153


                 .
gi 13422423  185 A 185
Cdd:PRK10641 154 D 154

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01