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Conserved domains on  [gi|55154472|gb|AAH85325|]
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Zgc:100824 [Danio rerio]

Protein Classification

diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein( domain architecture ID 706585)

diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family protein similar to diphosphomevalonate decarboxylase (DMD) that catalyzes the decarboxylation of mevalonate 5-diphosphate (MVAPP) to isopentenyl diphosphate (IPP), and mevalonate 3,5-bisphosphate decarboxylase (MBD) that catalyzes the ATP-independent decarboxylation of (R)-mevalonate 3,5-bisphosphate to isopentenyl phosphate

EC:  4.1.1.-
Gene Ontology:  GO:0016831|GO:0008299
PubMed:  8382990|7947744|31268677

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MDD_C super family cl28577
Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase ...
 11-332 1.97e-162

Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase (EC:4.1.1.33) catalyzes the ATP dependent decarboxylation of mevalonate 5-diphosphate (MVAPP) to form isopentenyl 5-diphosphate. The reaction is required for production of polyisoprenoids and sterols from acetyl-CoA. This entry represents the C-terminal domain of the mevalonate 5-diphosphate decarboxylase enzyme which is a member of the GHMP kinase superfamily.


The actual alignment was detected with superfamily member PLN02407:

Pssm-ID: 475042  Cd Length: 343  Bit Score: 459.64  E-value: 1.97e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   11 MVTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLHQDHLRTTTTIACSRSFHKDCIWLNGKEQDISHPRLQSCLLEIRR 90
Cdd:PLN02407   3 MVTAQAPTNIAVIKYWGKRDEKLILPINSSISVTLDPDHLCATTTVAVSPSFDQDRLWLNGKEISLSGGRYQNCLREIRA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   91 LAQRRKNTgDPASDVSNK------VHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV----EGELSGVARQGSGSACR 160
Cdd:PLN02407  83 RATDVEDE-EKGIKITKKdweklhVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVkedfPGELSAIARQGSGSACR 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  161 SLYGGFVQWKLGEQSDGKDSIAEQVASELYWPELRVLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMI 240
Cdd:PLN02407 162 SLYGGFVKWNMGKKEDGSDSIAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSPLLQHRAKEVVPKRILQME 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  241 RAIRLRDFPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLPE 320
Cdd:PLN02407 242 EAIKNRDFASFAKLTCADSNQFHATCLDTSPPIFYMNDTSRRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIALNRKVAA 321

                        330
                 ....*....|....
gi 55154472  321 FV--EVVRHFFPPE 332
Cdd:PLN02407 322 QLlqRLLYYFPPSS 335
 
Name Accession Description Interval E-value
PLN02407 PLN02407
diphosphomevalonate decarboxylase
 11-332 1.97e-162

diphosphomevalonate decarboxylase


Pssm-ID: 178029  Cd Length: 343  Bit Score: 459.64  E-value: 1.97e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   11 MVTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLHQDHLRTTTTIACSRSFHKDCIWLNGKEQDISHPRLQSCLLEIRR 90
Cdd:PLN02407   3 MVTAQAPTNIAVIKYWGKRDEKLILPINSSISVTLDPDHLCATTTVAVSPSFDQDRLWLNGKEISLSGGRYQNCLREIRA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   91 LAQRRKNTgDPASDVSNK------VHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV----EGELSGVARQGSGSACR 160
Cdd:PLN02407  83 RATDVEDE-EKGIKITKKdweklhVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVkedfPGELSAIARQGSGSACR 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  161 SLYGGFVQWKLGEQSDGKDSIAEQVASELYWPELRVLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMI 240
Cdd:PLN02407 162 SLYGGFVKWNMGKKEDGSDSIAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSPLLQHRAKEVVPKRILQME 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  241 RAIRLRDFPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLPE 320
Cdd:PLN02407 242 EAIKNRDFASFAKLTCADSNQFHATCLDTSPPIFYMNDTSRRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIALNRKVAA 321

                        330
                 ....*....|....
gi 55154472  321 FV--EVVRHFFPPE 332
Cdd:PLN02407 322 QLlqRLLYYFPPSS 335
MDD_C pfam18376
Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase ...
 196-381 7.42e-121

Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase (EC:4.1.1.33) catalyzes the ATP dependent decarboxylation of mevalonate 5-diphosphate (MVAPP) to form isopentenyl 5-diphosphate. The reaction is required for production of polyisoprenoids and sterols from acetyl-CoA. This entry represents the C-terminal domain of the mevalonate 5-diphosphate decarboxylase enzyme which is a member of the GHMP kinase superfamily.


Pssm-ID: 465732  Cd Length: 186  Bit Score: 348.01  E-value: 7.42e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   196 VLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMIRAIRLRDFPKFGELTMKDSNQFHAICLDTYPPIFY 275
Cdd:pfam18376   1 VLILVVSDEKKEVSSTSGMQRSVETSPLLKHRAEHVVPERMEAMEKAILAKDFETFAEITMKDSNQFHAVCLDTYPPIFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   276 LNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVRHFFPPEVNEEEFFKGLPVCPADLSEEMIR 355
Cdd:pfam18376  81 LNDTSRAIIQLVHAYNEFAGRIKVAYTFDAGPNAVLYLLEKDVPKVLSLLKHFFPPSTNGDQFFKGLPVLPSELSEELKA 160

                         170       180
                  ....*....|....*....|....*.
gi 55154472   356 DINMKPTPNGIRYMISTKAGPGPRVV 381
Cdd:pfam18376 161 SLAMKPIPGGVKYIIHTKVGDGPRVL 186
mevDPdecarb TIGR01240
diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of ...
 12-329 4.26e-91

diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of isopentenyl diphosphate (IPP) in the mevalonate pathway. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase [Central intermediary metabolism, Other]


Pssm-ID: 130307  Cd Length: 305  Bit Score: 276.83  E-value: 4.26e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472    12 VTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLhqDHLRTTTTIACSRSFHKDCIWLNGKEQ-DISHPRLQSCLLEIRR 90
Cdd:TIGR01240   1 ASVTAYVNIATIKYWGKRNTKLNLPTNSSISLTL--SQLRTLTSVAFADEFERDTFYLNGTLQhSIDNEKTSNCLDDFRQ 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472    91 LAQrrkntgdpasdVSNKVHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV---EGELSGVARQGSGSACRSLYGGFV 167
Cdd:TIGR01240  79 LRK-----------EQEKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLpldTSELSRIARKGSGSACRSLFGGYV 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   168 QWKLGEqsDGKDSIAEQVASELYWPELRVLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPgRMEEMIRAIRLRD 247
Cdd:TIGR01240 148 AWEKGK--DDHSSAAVQVADDSDWPQ*AMCVLVVNDIKKDVSSRQGMQLTVATSELFKEWIEHVVP-DFEV*RKAIKTKD 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   248 FPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQyyGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVRH 327
Cdd:TIGR01240 225 FATFGKETEANSLSMHATTLDAFPPFFYLNDTSKRAMSAVHTLRQ--GGTICYFTMDAGPNVKVLYLAENLSKLFEFIYK 302


                  ..
gi 55154472   328 FF 329
Cdd:TIGR01240 303 LF 304
MVD1 COG3407
Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate ...
 11-330 7.53e-83

Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate pyrophosphate decarboxylase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 442633  Cd Length: 322  Bit Score: 256.27  E-value: 7.53e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  11 MVTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLhqDHLRTTTTIACSRSFHKDCIWLNGKEQDIS-HPRLQSCLLEIR 89
Cdd:COG3407   5 SATARAHSNIALIKYWGKRDEELNLPANPSLSLTL--DAFYTTTTVEFDKDLAEDEFILNGEPQKGKfLPKISKFLDRVR 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  90 RLAQRrkntgdpasdvSNKVHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNVEG---ELSGVARQGSGSACRSLYGGF 166
Cdd:COG3407  83 ALAGK-----------SYHARIESENNFPTAAGLASSASGFAALALAANSAEGLDLddrKLSRLARLGSGSACRSIFGGF 151

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472 167 VQWklGEQSDGKDSIAEQVASElYWPeLRVLILVVSAEQKSVGSTSGMHTsVETSHLLKYRADAvVPGRMEEMIRAIRLR 246
Cdd:COG3407 152 VEW--GKGEDDEDSYAVPIPAE-DWD-LADIILVVDKGEKKVSSREGMKT-AETSPFYPAWVEQ-AEEDLEKLKEAIKAG 225

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472 247 DFPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQyyGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVR 326
Cdd:COG3407 226 DFEALGEIAESNALRMHATMMTSNPPFIYWKPNTLEVINAVRELRE--EGLPVYFTLDAGPNVKVLCPEEDAEKVAAFLA 303


                ....
gi 55154472 327 HFFP 330
Cdd:COG3407 304 AELV 307
 
Name Accession Description Interval E-value
PLN02407 PLN02407
diphosphomevalonate decarboxylase
 11-332 1.97e-162

diphosphomevalonate decarboxylase


Pssm-ID: 178029  Cd Length: 343  Bit Score: 459.64  E-value: 1.97e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   11 MVTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLHQDHLRTTTTIACSRSFHKDCIWLNGKEQDISHPRLQSCLLEIRR 90
Cdd:PLN02407   3 MVTAQAPTNIAVIKYWGKRDEKLILPINSSISVTLDPDHLCATTTVAVSPSFDQDRLWLNGKEISLSGGRYQNCLREIRA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   91 LAQRRKNTgDPASDVSNK------VHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV----EGELSGVARQGSGSACR 160
Cdd:PLN02407  83 RATDVEDE-EKGIKITKKdweklhVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVkedfPGELSAIARQGSGSACR 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  161 SLYGGFVQWKLGEQSDGKDSIAEQVASELYWPELRVLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMI 240
Cdd:PLN02407 162 SLYGGFVKWNMGKKEDGSDSIAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSPLLQHRAKEVVPKRILQME 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  241 RAIRLRDFPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLPE 320
Cdd:PLN02407 242 EAIKNRDFASFAKLTCADSNQFHATCLDTSPPIFYMNDTSRRIISLVEKWNRSEGTPQVAYTFDAGPNAVLIALNRKVAA 321

                        330
                 ....*....|....
gi 55154472  321 FV--EVVRHFFPPE 332
Cdd:PLN02407 322 QLlqRLLYYFPPSS 335
MDD_C pfam18376
Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase ...
 196-381 7.42e-121

Mevalonate 5-diphosphate decarboxylase C-terminal domain; Mevalonate diphosphate decarboxylase (EC:4.1.1.33) catalyzes the ATP dependent decarboxylation of mevalonate 5-diphosphate (MVAPP) to form isopentenyl 5-diphosphate. The reaction is required for production of polyisoprenoids and sterols from acetyl-CoA. This entry represents the C-terminal domain of the mevalonate 5-diphosphate decarboxylase enzyme which is a member of the GHMP kinase superfamily.


Pssm-ID: 465732  Cd Length: 186  Bit Score: 348.01  E-value: 7.42e-121
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   196 VLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMIRAIRLRDFPKFGELTMKDSNQFHAICLDTYPPIFY 275
Cdd:pfam18376   1 VLILVVSDEKKEVSSTSGMQRSVETSPLLKHRAEHVVPERMEAMEKAILAKDFETFAEITMKDSNQFHAVCLDTYPPIFY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   276 LNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVRHFFPPEVNEEEFFKGLPVCPADLSEEMIR 355
Cdd:pfam18376  81 LNDTSRAIIQLVHAYNEFAGRIKVAYTFDAGPNAVLYLLEKDVPKVLSLLKHFFPPSTNGDQFFKGLPVLPSELSEELKA 160

                         170       180
                  ....*....|....*....|....*.
gi 55154472   356 DINMKPTPNGIRYMISTKAGPGPRVV 381
Cdd:pfam18376 161 SLAMKPIPGGVKYIIHTKVGDGPRVL 186
mevDPdecarb TIGR01240
diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of ...
 12-329 4.26e-91

diphosphomevalonate decarboxylase; This enzyme catalyzes the last step in the synthesis of isopentenyl diphosphate (IPP) in the mevalonate pathway. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase [Central intermediary metabolism, Other]


Pssm-ID: 130307  Cd Length: 305  Bit Score: 276.83  E-value: 4.26e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472    12 VTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLhqDHLRTTTTIACSRSFHKDCIWLNGKEQ-DISHPRLQSCLLEIRR 90
Cdd:TIGR01240   1 ASVTAYVNIATIKYWGKRNTKLNLPTNSSISLTL--SQLRTLTSVAFADEFERDTFYLNGTLQhSIDNEKTSNCLDDFRQ 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472    91 LAQrrkntgdpasdVSNKVHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV---EGELSGVARQGSGSACRSLYGGFV 167
Cdd:TIGR01240  79 LRK-----------EQEKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLpldTSELSRIARKGSGSACRSLFGGYV 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   168 QWKLGEqsDGKDSIAEQVASELYWPELRVLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPgRMEEMIRAIRLRD 247
Cdd:TIGR01240 148 AWEKGK--DDHSSAAVQVADDSDWPQ*AMCVLVVNDIKKDVSSRQGMQLTVATSELFKEWIEHVVP-DFEV*RKAIKTKD 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472   248 FPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQyyGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVRH 327
Cdd:TIGR01240 225 FATFGKETEANSLSMHATTLDAFPPFFYLNDTSKRAMSAVHTLRQ--GGTICYFTMDAGPNVKVLYLAENLSKLFEFIYK 302


                  ..
gi 55154472   328 FF 329
Cdd:TIGR01240 303 LF 304
MVD1 COG3407
Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate ...
 11-330 7.53e-83

Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]; Mevalonate pyrophosphate decarboxylase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 442633  Cd Length: 322  Bit Score: 256.27  E-value: 7.53e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  11 MVTCTAPVNIAVIKYWGKRDEDLILPVNASLSVTLhqDHLRTTTTIACSRSFHKDCIWLNGKEQDIS-HPRLQSCLLEIR 89
Cdd:COG3407   5 SATARAHSNIALIKYWGKRDEELNLPANPSLSLTL--DAFYTTTTVEFDKDLAEDEFILNGEPQKGKfLPKISKFLDRVR 82

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472  90 RLAQRrkntgdpasdvSNKVHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNVEG---ELSGVARQGSGSACRSLYGGF 166
Cdd:COG3407  83 ALAGK-----------SYHARIESENNFPTAAGLASSASGFAALALAANSAEGLDLddrKLSRLARLGSGSACRSIFGGF 151

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472 167 VQWklGEQSDGKDSIAEQVASElYWPeLRVLILVVSAEQKSVGSTSGMHTsVETSHLLKYRADAvVPGRMEEMIRAIRLR 246
Cdd:COG3407 152 VEW--GKGEDDEDSYAVPIPAE-DWD-LADIILVVDKGEKKVSSREGMKT-AETSPFYPAWVEQ-AEEDLEKLKEAIKAG 225

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 55154472 247 DFPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQyyGETRVAYTFDAGPNAVIYSLQDYLPEFVEVVR 326
Cdd:COG3407 226 DFEALGEIAESNALRMHATMMTSNPPFIYWKPNTLEVINAVRELRE--EGLPVYFTLDAGPNVKVLCPEEDAEKVAAFLA 303


                ....
gi 55154472 327 HFFP 330
Cdd:COG3407 304 AELV 307
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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