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Conserved domains on  [gi|35192999|gb|AAH58553|]
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Zfp11 protein, partial [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
120-497 3.06e-13

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.42  E-value: 3.06e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 120 RPYKCKECGKAFKRSRNLAQHQVTHKREKPHKCEECGRA--FSALSVLTQHRITHTGEKPFKC-KECGRAFKYNSTLTQH 196
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDksFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSLS 111

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 197 EVIHTEAKPYRCQECGKAFK---------RSHTLSQHQVIHKG-----------EKPHKCD---ECGRAFSKHSSLTQHQ 253
Cdd:COG5048 112 SSSSNSNDNNLLSSHSLPPSsrdpqlpdlLSISNLRNNPLPGNnsssvntpqsnSLHPPLPansLSKDPSSNLSLLISSN 191

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 254 VIHTGEKPYQCRECGKAFRYQSTLTRHHIVHTgAKPYKCPECDKAFNNSSTLSRHQIIHTGEKPYKCQECGRAFYCSSFL 333
Cdd:COG5048 192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASS 270

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 334 IQHMKIHFEE-------MPYRCRECGKPFRLSSQLIRHQR--IHTGE--EPYICRE--CGKTFKYQSNLTRHQILHTGAK 400
Cdd:COG5048 271 QSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 401 PYKCP--ECGKAFNNSSTLTRHQII--HTGEKPYKCQECSKAFYC---------SSYLIQHMKihFEEIPYRCKECGKPF 467
Cdd:COG5048 351 PAKEKllNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETLSNSCIrnfkrdsnlSLHIITHLS--FRPYNCKNPPCSKSF 428

                       410       420       430
                ....*....|....*....|....*....|
gi 35192999 468 KCSSQLIRHQRIHSGEKPYICKECGKAFNC 497
Cdd:COG5048 429 NRHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
372-682 9.58e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.01  E-value: 9.58e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 372 EPYICRECGKTFKYQSNLTRHQILHTGAKPYKC--PECGKAFNNSSTLTRHQIIHTGEKPYKC--QECSKAFYCSSYLIq 447
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNskSLPLSNSKASSSSL- 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 448 HMKIHFEEIPYRCKECGKPFKCSSQLIR--HQRIHSGEKPYIcKECGKAFNCTSYLTKHQRIHTGEKpyvcqeCGKAFNC 525
Cdd:COG5048 111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPdlLSISNLRNNPLP-GNNSSSVNTPQSNSLHPPLPANSL------SKDPSSN 183

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 526 SSYLSKHQRIHIGDRLYKCKECGKAYYFSSQLNRHQRIHTgEKPYVCQECGKAFNCSSylTKHQRIHIVEKPYVCKECSK 605
Cdd:COG5048 184 LSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSL--LSQSPSSLSSSDSSSSASES 260

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 606 AFSCSSYLTKHQRIH---------AGDRLYKCTECGKAYCFSSQLNRHQR--IHTRE--RPYRCKE--CGKAFITSSCLK 670
Cdd:COG5048 261 PRSSLPTASSQSSSPnesdsssekGFSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALK 340

                       330
                ....*....|..
gi 35192999 671 RHQETHTLQTPN 682
Cdd:COG5048 341 RHILLHTSISPA 352
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
120-497 3.06e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.42  E-value: 3.06e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 120 RPYKCKECGKAFKRSRNLAQHQVTHKREKPHKCEECGRA--FSALSVLTQHRITHTGEKPFKC-KECGRAFKYNSTLTQH 196
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDksFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSLS 111

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 197 EVIHTEAKPYRCQECGKAFK---------RSHTLSQHQVIHKG-----------EKPHKCD---ECGRAFSKHSSLTQHQ 253
Cdd:COG5048 112 SSSSNSNDNNLLSSHSLPPSsrdpqlpdlLSISNLRNNPLPGNnsssvntpqsnSLHPPLPansLSKDPSSNLSLLISSN 191

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 254 VIHTGEKPYQCRECGKAFRYQSTLTRHHIVHTgAKPYKCPECDKAFNNSSTLSRHQIIHTGEKPYKCQECGRAFYCSSFL 333
Cdd:COG5048 192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASS 270

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 334 IQHMKIHFEE-------MPYRCRECGKPFRLSSQLIRHQR--IHTGE--EPYICRE--CGKTFKYQSNLTRHQILHTGAK 400
Cdd:COG5048 271 QSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 401 PYKCP--ECGKAFNNSSTLTRHQII--HTGEKPYKCQECSKAFYC---------SSYLIQHMKihFEEIPYRCKECGKPF 467
Cdd:COG5048 351 PAKEKllNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETLSNSCIrnfkrdsnlSLHIITHLS--FRPYNCKNPPCSKSF 428

                       410       420       430
                ....*....|....*....|....*....|
gi 35192999 468 KCSSQLIRHQRIHSGEKPYICKECGKAFNC 497
Cdd:COG5048 429 NRHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
372-682 9.58e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.01  E-value: 9.58e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 372 EPYICRECGKTFKYQSNLTRHQILHTGAKPYKC--PECGKAFNNSSTLTRHQIIHTGEKPYKC--QECSKAFYCSSYLIq 447
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNskSLPLSNSKASSSSL- 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 448 HMKIHFEEIPYRCKECGKPFKCSSQLIR--HQRIHSGEKPYIcKECGKAFNCTSYLTKHQRIHTGEKpyvcqeCGKAFNC 525
Cdd:COG5048 111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPdlLSISNLRNNPLP-GNNSSSVNTPQSNSLHPPLPANSL------SKDPSSN 183

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 526 SSYLSKHQRIHIGDRLYKCKECGKAYYFSSQLNRHQRIHTgEKPYVCQECGKAFNCSSylTKHQRIHIVEKPYVCKECSK 605
Cdd:COG5048 184 LSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSL--LSQSPSSLSSSDSSSSASES 260

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 606 AFSCSSYLTKHQRIH---------AGDRLYKCTECGKAYCFSSQLNRHQR--IHTRE--RPYRCKE--CGKAFITSSCLK 670
Cdd:COG5048 261 PRSSLPTASSQSSSPnesdsssekGFSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALK 340

                       330
                ....*....|..
gi 35192999 671 RHQETHTLQTPN 682
Cdd:COG5048 341 RHILLHTSISPA 352
zf-H2C2_2 pfam13465
Zinc-finger double domain;
557-581 7.37e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 7.37e-04
                          10        20
                  ....*....|....*....|....*
gi 35192999   557 LNRHQRIHTGEKPYVCQECGKAFNC 581
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
417-441 5.86e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 5.86e-03
                          10        20
                  ....*....|....*....|....*
gi 35192999   417 LTRHQIIHTGEKPYKCQECSKAFYC 441
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
120-497 3.06e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.42  E-value: 3.06e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 120 RPYKCKECGKAFKRSRNLAQHQVTHKREKPHKCEECGRA--FSALSVLTQHRITHTGEKPFKC-KECGRAFKYNSTLTQH 196
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDksFSRPLELSRHLRTHHNNPSDLNsKSLPLSNSKASSSSLS 111

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 197 EVIHTEAKPYRCQECGKAFK---------RSHTLSQHQVIHKG-----------EKPHKCD---ECGRAFSKHSSLTQHQ 253
Cdd:COG5048 112 SSSSNSNDNNLLSSHSLPPSsrdpqlpdlLSISNLRNNPLPGNnsssvntpqsnSLHPPLPansLSKDPSSNLSLLISSN 191

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 254 VIHTGEKPYQCRECGKAFRYQSTLTRHHIVHTgAKPYKCPECDKAFNNSSTLSRHQIIHTGEKPYKCQECGRAFYCSSFL 333
Cdd:COG5048 192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLPTASS 270

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 334 IQHMKIHFEE-------MPYRCRECGKPFRLSSQLIRHQR--IHTGE--EPYICRE--CGKTFKYQSNLTRHQILHTGAK 400
Cdd:COG5048 271 QSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSIS 350

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 401 PYKCP--ECGKAFNNSSTLTRHQII--HTGEKPYKCQECSKAFYC---------SSYLIQHMKihFEEIPYRCKECGKPF 467
Cdd:COG5048 351 PAKEKllNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETLSNSCIrnfkrdsnlSLHIITHLS--FRPYNCKNPPCSKSF 428

                       410       420       430
                ....*....|....*....|....*....|
gi 35192999 468 KCSSQLIRHQRIHSGEKPYICKECGKAFNC 497
Cdd:COG5048 429 NRHYNLIPHKKIHTNHAPLLCSILKSFRRD 458
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
232-674 5.55e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 68.57  E-value: 5.55e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 232 KPHKCDECGRAFSKHSSLTQHQVIHTGEKPYQCRECGKAFRYQST--LTRHHIVHTGAKPYKCpeCDKAFNNSSTLSRHQ 309
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPleLSRHLRTHHNNPSDLN--SKSLPLSNSKASSSS 109

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 310 IIHTGEKPYKCQecgrafYCSSFLIQHMKIHFEEMPYR---------CRECGKPFRLSSQ--LIRHQRIHTgeepyicRE 378
Cdd:COG5048 110 LSSSSSNSNDNN------LLSSHSLPPSSRDPQLPDLLsisnlrnnpLPGNNSSSVNTPQsnSLHPPLPAN-------SL 176

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 379 CGKTFKYQSNLTRHQILHTGAKPYKCPECGKA--FNNSSTltrHQIIHTGEKPYKCQECSKAFYCSSYLIQHMKIHFEEI 456
Cdd:COG5048 177 SKDPSSNLSLLISSNVSTSIPSSSENSPLSSSysIPSSSS---DQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDS 253

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 457 PYRCKECGKPFKCSSQLIRHQRIHSGE-------KPYICKECGKAFNCTSYLTKHQR--IHTGE--KPYVC--QECGKAF 523
Cdd:COG5048 254 SSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLF 333

                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 524 NCSSYLSKHQRIHIGDRLYKCKecgkayyfssqLNRHQRIHTGEKPyvcqecgkafNCSSYLTKHQRIHIVEKPYVC--K 601
Cdd:COG5048 334 SRNDALKRHILLHTSISPAKEK-----------LLNSSSKFSPLLN----------NEPPQSLQQYKDLKNDKKSETlsN 392

                       410       420       430       440       450       460       470
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 35192999 602 ECSKAFSCSSYLTKHQRIHAGDR--LYKCTECGKAYCFSSQLNRHQRIHTRERPYRCKECGKAFITSSCLKRHQE 674
Cdd:COG5048 393 SCIRNFKRDSNLSLHIITHLSFRpyNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGKD 467
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
372-682 9.58e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.01  E-value: 9.58e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 372 EPYICRECGKTFKYQSNLTRHQILHTGAKPYKC--PECGKAFNNSSTLTRHQIIHTGEKPYKC--QECSKAFYCSSYLIq 447
Cdd:COG5048  32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNPSDLNskSLPLSNSKASSSSL- 110

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 448 HMKIHFEEIPYRCKECGKPFKCSSQLIR--HQRIHSGEKPYIcKECGKAFNCTSYLTKHQRIHTGEKpyvcqeCGKAFNC 525
Cdd:COG5048 111 SSSSSNSNDNNLLSSHSLPPSSRDPQLPdlLSISNLRNNPLP-GNNSSSVNTPQSNSLHPPLPANSL------SKDPSSN 183

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 526 SSYLSKHQRIHIGDRLYKCKECGKAYYFSSQLNRHQRIHTgEKPYVCQECGKAFNCSSylTKHQRIHIVEKPYVCKECSK 605
Cdd:COG5048 184 LSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSL--LSQSPSSLSSSDSSSSASES 260

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999 606 AFSCSSYLTKHQRIH---------AGDRLYKCTECGKAYCFSSQLNRHQR--IHTRE--RPYRCKE--CGKAFITSSCLK 670
Cdd:COG5048 261 PRSSLPTASSQSSSPnesdsssekGFSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALK 340

                       330
                ....*....|..
gi 35192999 671 RHQETHTLQTPN 682
Cdd:COG5048 341 RHILLHTSISPA 352
zf-H2C2_2 pfam13465
Zinc-finger double domain;
557-581 7.37e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 7.37e-04
                          10        20
                  ....*....|....*....|....*
gi 35192999   557 LNRHQRIHTGEKPYVCQECGKAFNC 581
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
500-525 2.26e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 2.26e-03
                          10        20
                  ....*....|....*....|....*.
gi 35192999   500 YLTKHQRIHTGEKPYVCQECGKAFNC 525
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
641-665 3.88e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 3.88e-03
                          10        20
                  ....*....|....*....|....*
gi 35192999   641 LNRHQRIHTRERPYRCKECGKAFIT 665
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
417-441 5.86e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 5.86e-03
                          10        20
                  ....*....|....*....|....*
gi 35192999   417 LTRHQIIHTGEKPYKCQECSKAFYC 441
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
93-220 5.86e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.68  E-value: 5.86e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 35192999  93 PYEC--KDCGKAFKYRSVLYQHRIIHTAARPYKCKECGKAFKRSRNL-------AQHQVTHKREKPHKCE--ECGRAFSA 161
Cdd:COG5048 321 PFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLnneppqsLQQYKDLKNDKKSETLsnSCIRNFKR 400

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 35192999 162 LSVLTQHRITHTGEKP--FKCKECGRAFKYNSTLTQHEVIHTEAKPYRCQECGKAFKRSHT 220
Cdd:COG5048 401 DSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDL 461
zf-H2C2_2 pfam13465
Zinc-finger double domain;
388-413 7.06e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 7.06e-03
                          10        20
                  ....*....|....*....|....*.
gi 35192999   388 NLTRHQILHTGAKPYKCPECGKAFNN 413
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
539-592 7.09e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.29  E-value: 7.09e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 35192999 539 DRLYKCKECGKAYYFSSQLNRHQRIHTGEKPYVCQECGKAFNCSSY--LTKHQRIH 592
Cdd:COG5048  31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPleLSRHLRTH 86
Mcm2 COG1241
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ...
 318-367 7.85e-03

DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];


Pssm-ID: 440854 [Multi-domain]  Cd Length: 682  Bit Score: 39.40  E-value: 7.85e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*
gi 35192999 318 YKCQECGRAFYcssflIQHMKIHFEEmPYRCRECGK--PFRL---SSQLIRHQRI 367
Cdd:COG1241 129 FECPRCGTETY-----VPQTGEKLQE-PHECPGCGRqgPFKLlpeKSEFIDAQKI 177
zf-H2C2_2 pfam13465
Zinc-finger double domain;
165-189 8.34e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 8.34e-03
                          10        20
                  ....*....|....*....|....*
gi 35192999   165 LTQHRITHTGEKPFKCKECGRAFKY 189
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
305-329 9.57e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 9.57e-03
                          10        20
                  ....*....|....*....|....*
gi 35192999   305 LSRHQIIHTGEKPYKCQECGRAFYC 329
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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