|
Name |
Accession |
Description |
Interval |
E-value |
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-463 |
8.17e-142 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 414.51 E-value: 8.17e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 1 MNWNAILPEAILAIGILTVFILELFLERKHYKFLSVLAFIFVVLSGYSIFFV--NYPAKLFFDGFSVDALNLIGKLFILA 78
Cdd:COG1007 2 LDLLALLPEIILLLGALVLLLLDLFLPRRSRRLLAGLALLGLLLALALLLLAlgGGTGTAFGGMFVVDGFALFFKLLILL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 79 VTGFVLLSSYDYFSKKNSQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVI 158
Cdd:COG1007 82 AALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 159 GTTGTSMYALGSALVYASSGSMVLSPVKE-------ENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYL 231
Cdd:COG1007 162 GALSSGFLLYGISLLYGATGSLNLAGIAAalaaggaNSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 232 STVPKIGMYFLFVKLTMYLFSAF-PDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFS 310
Cdd:COG1007 242 ATAPKIAAFAALLRLLVEAFPGLaADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVS 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 311 ALLFYVFVYALATVGAFTVLAILEKKEGWTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTD 390
Cdd:COG1007 322 AALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAG 401
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2983744 391 MFALGILFAIASLISAGYYLKVIVYMFLYSGEvRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVLDFILRAL 463
Cdd:COG1007 402 LYWLAVIAVLNSVISAYYYLRVVKAMYFDEPE-EEAPISAPPGLRVALVIAALLVLLLGIFPGPLLDLAAAAA 473
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
3-456 |
2.31e-134 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 395.47 E-value: 2.31e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 3 WNAILPEAILAIGILTVFILELFLERKH-YKFLSVLAFIFVVLSGYSIFFV--NYPAKLF--FDGFSVDALNLIGKLFIL 77
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKrNPLLLKNLSYIVLLSALVSLFLtlQYAAYLFtgFSFFIVDNFALLIKLILL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 78 AVTGFVLLSSYDYFSKKNSQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLV 157
Cdd:TIGR01770 81 LSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 158 IGTTGTSMYALGSALVYASSGSMVLSPVK-------EENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAY 230
Cdd:TIGR01770 161 LGAFSSGLLLFGISLIYGFTGSLNFEDLLlflsngmLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 231 LSTVPKIGMYFLFVKLTMYLFSAF-PDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLF 309
Cdd:TIGR01770 241 FSIVPKIAIFAVFLRLFLYILFGFsEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 310 SALLFYVFVYALATVGAFTVLAILEK-KEGWTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVK 388
Cdd:TIGR01770 321 KAVLFYIFIYALMSLGAFGVLSLLRSyKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2983744 389 TDMFALGILFAIASLISAGYYLKVIVYMFLYSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVL 456
Cdd:TIGR01770 401 SGLYWLAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
2-463 |
1.27e-117 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 352.97 E-value: 1.27e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 2 NWNAILPEAILAIGILTVFILELFLERK-HYKFLSVLAFIFVVLSGYSIFFVNYPAKLFFDGFSVDALNLIGKLFILAVT 80
Cdd:PRK05777 7 NLILLLPELILLGAAVVLLLIDAFVRRHsRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLAS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 81 GFVLLSSYDYFSKKnsQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVIGT 160
Cdd:PRK05777 87 LLALLLARPYLEDR--GRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 161 TGTSMYALGSALVYASSGSMVLSPV-------KEENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLST 233
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAGIakaladgSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 234 VPKIGMYFLFVKLTMYLFSAF-PDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSAL 312
Cdd:PRK05777 245 APKIAAFAVLLRLLVVAFGGLsEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 313 LFYVFVYALATVGAFTVLAILEKKEGWTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMF 392
Cdd:PRK05777 325 LFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLW 404
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2983744 393 ALGILFAIASLISAGYYLKVIVYMFLYSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVLDFILRAL 463
Cdd:PRK05777 405 WLAVIGVLNSAIGAFYYLRVIKLMYFDEPPRDAPVNWPLSAGGAVLSVSALLVLVLGIFPQPLLDLAAQAI 475
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
1-416 |
2.66e-73 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 239.57 E-value: 2.66e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 1 MNWNAILPEAILAIGILTVFILELFLERKHYKFLSVLAFIFVVLSGYSIFFV-NYPAKL-FFDGFSVDALNLIGKLFILA 78
Cdd:PRK02504 10 LNAGAILPEGIVILTLLGVLLVDLIGGRTASRWLPYLAIAGLGAALVALALQwDNPNPIsFLGSFNADNLSIAFRAIIAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 79 VTGFVLLSSYDYFSKKNSQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVI 158
Cdd:PRK02504 90 STLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 159 GTTGTSMYALGSALVYA-SSGSMVLSPVKEENT-----LFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLS 232
Cdd:PRK02504 170 GAASSAIFLYGSSLLYGlSGGSTQLSAIALALItspslGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 233 TVPKIGMYFLFVKLTMYLFSAFPD-WKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSA 311
Cdd:PRK02504 250 VGSKAAGFALAIRLLVTAFPSFDEqWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTEAGYAS 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 312 LLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDM 391
Cdd:PRK02504 330 MVFYLLAYLFMNLGAFACVILFSLRTG-TDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGL 408
|
410 420
....*....|....*....|....*
gi 2983744 392 FALGILFAIASLISAGYYLKVIVYM 416
Cdd:PRK02504 409 YLLVLVGLVTSVISIYYYIRVIKMM 433
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
4-417 |
6.80e-68 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 224.88 E-value: 6.80e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 4 NAILPEAILAIGILTVFILELFLERKHYKFLSVLAFIFVVLSGYSIFF--VNYPAKLFFDGFSVDALNLIGKLFILAVTG 81
Cdd:CHL00049 14 SFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFqwREEPMISFSGNFQTNNFNEIFQFLILLCST 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 82 FVLLSSYDYFSKKNSQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVIGTT 161
Cdd:CHL00049 94 LCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 162 GTSMYALGSALVYASSGSMV--------LSPVKEENTL-FALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLS 232
Cdd:CHL00049 174 SSSILVYGFSWLYGLSGGEIelqeivngLINTQMYNSPgISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLS 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 233 TVPKIGMYFLFVKLTMYLFSAFP-DWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHL-FS 310
Cdd:CHL00049 254 VTSKVAASALATRIFDIPFYFSSnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDgYA 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 311 ALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTD 390
Cdd:CHL00049 334 SMITYMLFYIFMNLGTFACIVLFGLRTG-TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAG 412
|
410 420
....*....|....*....|....*..
gi 2983744 391 MFALGILFAIASLISAGYYLKVIVYMF 417
Cdd:CHL00049 413 LYFLVSIGLLTSVISIYYYLKIIKLLM 439
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
75-456 |
2.95e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 179.83 E-value: 2.95e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 75 FILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFK 154
Cdd:MTH00199 73 IIIIIGSISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 155 YLVIGTTGTSMYALGSALVYASSGSMVLSPVKEeNTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTV 234
Cdd:MTH00199 153 YFVLGAVSSGLFLFGCALLYGLTGETSIQGINS-ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATV 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 235 PKIGMYFLFVKLTMYLfsafpdwkYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLF 314
Cdd:MTH00199 232 PKIGVFSILVQIGPVT--------NVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 315 YVFVYALATVGAFTVLAILekkeGWTHHFL-DFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFA 393
Cdd:MTH00199 304 YMIIYVIMSICSFSIILSL----KLTKGLIvEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYL 379
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 394 LGILFAIASLISAGYYLKVI-------VYMFLYSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVL 456
Cdd:MTH00199 380 ICIIAVLSSVIAGVYYVRVVqiiyfqaDYSILIWQKVLKKEERLDLSKSILIGVTFFIILFLMISPNFLL 449
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
63-416 |
2.27e-49 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 174.18 E-value: 2.27e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPyLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLF 142
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYP-LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 143 RREYlSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKE-----ENTLFALGVILIISALALKVSAVPFHFWTP 217
Cdd:COG0651 151 GTKE-ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAArlaelDPGLLLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 218 DAYEGAPTPTTAYLSTV-PKIGMYFLF-VKLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLlTKVGVYAILrVLTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 296 YFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAV 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSG 388
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2983744 376 FLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYM 416
Cdd:COG0651 389 FVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
118-402 |
1.98e-43 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 154.39 E-value: 1.98e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 118 SDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVL------SPVKEENTL 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelskaLTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 192 FALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYL-STVPKIGMYFLFVKLTMYLFSAfPDWKYVVMLLAVLSMF 270
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSLLYLPSS-PFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 271 YGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGWTHHFLDFKGLK 350
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2983744 351 EENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIAS 402
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
110-459 |
1.52e-40 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 149.02 E-value: 1.52e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 110 LGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGS-------MVL 182
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGlhlsyinLVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 183 SPVKEENTLFAL-GVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLfsafpdwkYVV 261
Cdd:MTH00196 84 NSGQSFSSVSVPiGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNV--------NIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 262 MLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGWth 341
Cdd:MTH00196 156 LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNL-- 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 342 hFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMF---- 417
Cdd:MTH00196 234 -IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKILFfqan 312
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2983744 418 ---LYSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVLDFI 459
Cdd:MTH00196 313 sflLISTKILKKENKINLRKALLIGFSLYLILFTILSPNFFFQLA 357
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
63-463 |
4.04e-39 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 147.72 E-value: 4.04e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYgelPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLF 142
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQTRF---YALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 143 RREyLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSM---VLSPVKEENTLFALGVILIISALALKVSAVPFHFWTPDA 219
Cdd:PRK08375 150 GDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLnmaDLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 220 YEGAPTPTTAYLS-TVPKIGMYFLF-VKLTMYLFSAFPD--WKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAG 295
Cdd:PRK08375 229 YPAAPPVVTALLSgLVTKVAVYALIrIYFTVFGGDFRFAlgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 296 YFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAV 375
Cdd:PRK08375 309 YILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSG 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 376 FLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFLYSGEVRHGQTTVSAGEAFTV--LGTAFLVIFFGLFPH 453
Cdd:PRK08375 388 FVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLApsLALALLSLLLGIYAG 467
|
410
....*....|
gi 2983744 454 VVLDFILRAL 463
Cdd:PRK08375 468 PLLQLADAAA 477
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
104-418 |
3.71e-34 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 134.99 E-value: 3.71e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 104 LYLIATLGLMVMISSDNLAIIFTGLELASITMYILVG--------LFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYA 175
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGegsqpgshFPSPGNTPPESGLKYWILGAMSSGFYLFGCALYFG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 176 SSGS-----MVLSPVKEENTL----FALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKL 246
Cdd:MTH00198 273 FTGNegmlgTILSATLETTNIelrqGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 247 TMYlfsafpdwKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGA 326
Cdd:MTH00198 353 VIT--------SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 327 FTVLAILEKKEGWT----------------HHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKT- 389
Cdd:MTH00198 425 FTVICTLEEFGTRTptsrqrdgsfgnynlvRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIa 504
|
330 340 350
....*....|....*....|....*....|....*
gi 2983744 390 -----DMFALGILFA-IASLISAGYYLKVIVYMFL 418
Cdd:MTH00198 505 fssslSIYYLVALFAiICTCISAFYYIRIVATIYF 539
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
61-459 |
3.09e-33 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 130.97 E-value: 3.09e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 61 DGFSVDALNLIGKLFILAVtgfvlLSSYDYFSKKNSQYgelpY-LYLIATLGLMVMISSDNLAIIFTGLELASITMYILV 139
Cdd:COG1008 81 DGISLPLVLLTALLTPLAI-----LASWNEIKKRPKLY----YaLLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 140 GLF---RREYlskeGAFKYLVIGTTGTSMYALGSALVYASSGSMVLS---------PVKEENTLFALgvILIisALALKV 207
Cdd:COG1008 152 GIWggeRRIY----AAIKFFLYTLAGSLLMLVAILALYFLAGALTFDiaelaaaplPLTAQLLLFLA--FFI--AFAVKV 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 208 SAVPFHFWTPDAYEGAPTPTTAYLSTV-PKIGMYfLFVKLTMYLF-SAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRL 285
Cdd:COG1008 224 PMFPFHTWLPDAHVEAPTAGSVLLAGVlLKMGGY-GLLRFALPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 286 LAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLF 365
Cdd:COG1008 303 IAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAAL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 366 ALIGIPPAAVFLGKLGIFFGLVKTDmFALGILFAIASLISAGYYLKVIVYMFLysGEVRHGQTTV---SAGEAFTVLGTA 442
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVN-PWLAILAALGLILTAAYLLWMYQRVFF--GPLKEELAELpdlNPRELAVLAPLA 458
|
410
....*....|....*..
gi 2983744 443 FLVIFFGLFPHVVLDFI 459
Cdd:COG1008 459 ALILLLGLYPQPLLDLI 475
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
63-460 |
3.04e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 128.68 E-value: 3.04e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFsKKNSQYGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLF 142
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYM-KHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFR 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 143 RREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGS--MVLSPVKEENTLFALGVI---LIISALALKVSAVPFHFWTP 217
Cdd:PRK08376 165 NDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTlnMAYLAVKMSENPTVVAKIalaLFIAGLAMKSGAVPVHMWLP 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 218 DAYEGAPTPTTAYLSTVPKIGMYFLF-VKLTMY---LFSAFPDWkyVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAH 293
Cdd:PRK08376 245 DAYPAAPSSISAMLLVIKQAGLYALArVLFSIYgpaINLATVGW--VIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 294 AGYFLTAL---------TAVDKHLFSAL---LFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLA 361
Cdd:PRK08376 323 IGYMLLGLgvglaalgdPAMASYGEIALaggIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFL 401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 362 LFLFALIGIPPAAVFLGKLGIFFGLVKTDMFaLGILFAIASLISAGYYLKVIVYMFLysGEVRHGQTTVSAGEAFTVLGT 441
Cdd:PRK08376 402 IGAAAIVGLPPFNGFASKWLIYESSALFNPI-LGVIAMIGSVLTLASFVKVFHTAFF--GPPSEKVMNVKEPPKPMLVPM 478
|
410 420
....*....|....*....|..
gi 2983744 442 ---AFLVIFFGLFPHVVLDFIL 460
Cdd:PRK08376 479 lilAIAIIGMGLFPWQISDKLM 500
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
104-462 |
6.28e-32 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 127.58 E-value: 6.28e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 104 LYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGlFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLS 183
Cdd:PRK08377 113 LFLLLMLGATGMIATGDIFNLFVFMEITAITAYALTA-YNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 184 PVKE-----ENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLF-VKLTMYLFSAFPD 256
Cdd:PRK08377 192 HIAQlagtiDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVvKAGLYAMArILYLMQNANGWSS 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 257 WKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKK 336
Cdd:PRK08377 272 VLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGIT 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 337 EGWTHhFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYM 416
Cdd:PRK08377 352 LGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTM 430
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2983744 417 FLYSGEVRHGQTTVSageAFTVLGTAFLVIFFGLFPHVVLDFILRA 462
Cdd:PRK08377 431 WFKGEGERIRENAAI---GIILLLLAALIVVIGIYPTPFWEVVQKA 473
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-460 |
1.36e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 127.01 E-value: 1.36e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 65 VDALNLIGKLFILAVTGFVLLSSYDYFSKKnsqygELPYLYLIATLGLMVMIssdnLAIIFTG--------LELASITMY 136
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE-----SGPEWYYTLLLGLEAGM----LGILLTGdafnlfvmLEVLSISAY 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 137 ILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGS--MVLSPVKE------------ENTLFALGVILIIS- 201
Cdd:PRK12667 151 GLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTlnMADLSAKIrglsfpltgglaGNPPLALGVALALAl 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 202 -ALALKVSAVPFHFWTPDAYEGAPTPTTAYLS-TVPKIGMY------FLFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGN 273
Cdd:PRK12667 231 wAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSgLVVNVGAYaiirflYTIFGISPSLIDFRAALSPILIILGAVSAIIGA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 274 IVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEEN 353
Cdd:PRK12667 311 LMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKM 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 354 PVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFLYSGEVRHGQTTV-SA 432
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKeSP 469
|
410 420
....*....|....*....|....*...
gi 2983744 433 GEAFTVLGTAFLVIFFGLFPHVVLDFIL 460
Cdd:PRK12667 470 SMSVVILVLALAVLILGILALFLPEILD 497
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
62-459 |
1.27e-28 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 118.95 E-value: 1.27e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIATLGlmVMISSDnLAIIFTGLELASITMYILVGL 141
Cdd:PRK08668 64 TFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLG--VFLAND-LLTLYIFWEIMTFSSFMMVPM 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 142 FRREylSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPV-----KEENTLFALGVILIISALAL-KVSAVPFHFW 215
Cdd:PRK08668 141 GKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIsqgliNDTSTGFALIVFLFLLAFGVaKAGIFPLHVW 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 216 TPDAYEGAPTPTTAYLSTV-PKIGMYFLFVKL----TMYLFSAFPDWK------YVVMLLAVLSMFYGNIVAYAQKSVKR 284
Cdd:PRK08668 219 APDAYSEAPQSFSAVLSGQlSKLGAYGFLLVLyvlpGTKLFSEFGTYRgvplfnYILAWLGNISIIVGTLMAILQEDIKK 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 285 LLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFL 364
Cdd:PRK08668 299 LIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTG-TTKISEMGGLIEKMPFTFAMYLVAI 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 365 FALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFLysGEVRHGQTTVSAGEAFTVLGTAFL 444
Cdd:PRK08668 378 ISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLAGVFL--GQLPSDHKDVKEAPLPMLIPMAIL 455
|
410
....*....|....*...
gi 2983744 445 VI---FFGLFPHVVLDFI 459
Cdd:PRK08668 456 VLlnvVFGVAPGLVLQEI 473
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
5-405 |
2.05e-26 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 111.56 E-value: 2.05e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 5 AILPEAILAIGILTVFILELFLERKHYKFLSVLA-FIFVVLSGYSIFFVNYPAKLFFDG--FSVDALNLigklFILAVTG 81
Cdd:PRK06458 4 SILFALLLLIPLLASLLLFALRKRRLVATLNVLGiTLTLILALWLVFTVPDAGEIFAAGlwFFIDDLNV----FFLALIG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 82 FVLLSSYDY---FSKKNSQYGELP--------YLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREyLSKE 150
Cdd:PRK06458 80 VVGFLTSLYsigYMRHEVEHGELSpvtlrlyyGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTR-ASLE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 151 GAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKE-------------ENTLFALGVILIISALALKVSAVPFHFWTP 217
Cdd:PRK06458 159 AAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAilwtellkhasllDPTLMKLAFVFLLIGFGTKVGLFPMHAWLP 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 218 DAYEGAPTPTTAYLSTV-PKIGMYFL---FVKLTMYLFSAFPDWKYVVMllAVLSMFYGNIVAYAQKSVKRLLAYSSIAH 293
Cdd:PRK06458 239 DAHSEAPSPVSALLSGVlLNVALYAVlryYILIDAAIGSDFPGRLLLIF--GLLSVLVAAFFLLRQRDIKRLFAYSSIEH 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 294 AGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPA 373
Cdd:PRK06458 317 MGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPF 395
|
410 420 430
....*....|....*....|....*....|..
gi 2983744 374 AVFLGKLGIFFGLVKTDMFALGILFAIASLIS 405
Cdd:PRK06458 396 GVFISEFLILTAGLARGPLLIAILLLLLLTLA 427
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
104-420 |
2.40e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 111.36 E-value: 2.40e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 104 LYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLfRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLS 183
Cdd:PRK12662 115 AFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMG 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 184 PVKE------ENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFSA---- 253
Cdd:PRK12662 194 DMFLiiqdlpTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKAnfvf 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 254 -FPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAI 332
Cdd:PRK12662 274 tTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGS 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 333 LEKKEGWThHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKV 412
Cdd:PRK12662 354 ISYHFGTT-KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
....*...
gi 2983744 413 IVYMFLYS 420
Cdd:PRK12662 433 VEALYFES 440
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
74-459 |
7.82e-26 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 109.64 E-value: 7.82e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 74 LFILAVTGFVLLSS--YDYFSKKNSQyGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLF---RREYls 148
Cdd:TIGR01972 80 LLLVLLTALLTLLAilASWESIQKRV-KEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWggpNRIY-- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 149 keGAFKYLVIGTTGtSMYALGSALVYASSGSMVLSPVKEENTLFALGV-----ILIISALALKVSAVPFHFWTPDAYEGA 223
Cdd:TIGR01972 157 --AAMKFFLYTLAG-SLLMLLAILGLYFLGGGTFDLLELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAHVEA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 224 PTPTTAYLS-TVPKIGMYFLFVkltmYLFSAFPD----WKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFL 298
Cdd:TIGR01972 234 PTAGSVILAgVLLKMGTYGFLR----FNLPLFPDaslyFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 299 TALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLG 378
Cdd:TIGR01972 310 LGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAH-TRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 379 KLGIFFGLVKTDmFALGILFAIASLISAGYYLKVIVYMFL--YSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVL 456
Cdd:TIGR01972 389 EFLILLGSFKVN-PVVAFLAALGIVLAAAYMLTLYKRVFFgeLSNPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
...
gi 2983744 457 DFI 459
Cdd:TIGR01972 468 DLT 470
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
110-421 |
1.17e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 104.20 E-value: 1.17e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 110 LGLMVMISSDNLAIIFTGLELASITMYILVGLfRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSpvkeen 189
Cdd:MTH00144 15 MGTLLSLSSSHWLGVWVGLEINLIGFLPLLVY-KKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM------ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 190 tlfalgvILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVkltmyLFSAFPDWKYVVMLLAVLSM 269
Cdd:MTH00144 88 -------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLS-----NFLDLYWLAYLLCVISVLSA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 270 FYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTavdkHLFSALLFYVFVYALATVGAFTVLailekkegWTHHFLDFKGL 349
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSL--------WSGDSGSMKDL 223
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2983744 350 KEENPVLASMLA--LFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFLYSG 421
Cdd:MTH00144 224 GSLKPSYKTGLSiiSLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSS 297
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-459 |
1.96e-24 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 105.67 E-value: 1.96e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 1 MNWNaILPEAIL--AIGILTVFILELFLERKHyKFLSVLAFIFV-VLSGYSIFFVNYPAKLFFDGFSVDALNLIGKLFIL 77
Cdd:PRK05846 1 MNWP-LLSLLIFlpLIGGLLVLLTERFGARLA-RWIALIGTLLTlLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 78 AVTG--------------FVLLSSYDYFSKKNSQYgelpYLYLIATLGLMVMI-SSDNLAIIFTGLELASITMYILVGLF 142
Cdd:PRK05846 79 GVDGislllvvltalltpLAVLASWEEIKKRVKFY----MAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 143 ---RREYlskeGAFKYLVIGTTGT-----SMYALGsALVYASSGSMVLSPVKEENTLFALGVILIIS---ALALKVSAVP 211
Cdd:PRK05846 155 ggkNRIY----AATKFFLYTLLGSllmlvAIIYLV-VVYYNATGTFDIADLLNLPLPPGVQYWLFLAffiAFAVKMPMFP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 212 FHFWTPDAYEGAPTPTTAYLSTV-PKIGMYFlFVKLTMYLFS-AFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYS 289
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGIlLKMGAYG-LLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 290 SIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIG 369
Cdd:PRK05846 309 SISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 370 IPPAAVFLGKLGIFFGLVKTDmFALGILFAIASLISAGYYLKVIVYMFLysGEVRHGQTTV---SAGEAFTVLGTAFLVI 446
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSFQVN-PVIAFIATTGLILAAVYSLWLYQRVMF--GPVKNEVAKLkdlNGRELLILLPLVALLL 464
|
490
....*....|...
gi 2983744 447 FFGLFPHVVLDFI 459
Cdd:PRK05846 465 LLGVYPKPLLDVI 477
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
62-464 |
1.51e-23 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 103.69 E-value: 1.51e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGElpYLYLIATLGLMVMI-SSDNLAIIFTGLELASITMYILVG 140
Cdd:COG1009 75 GFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARF--FAYLLLFMAAMLGLvLSDNLLLLFVFWELVGLCSYLLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 141 LFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTLFALGVILIISALALKVSA------VPFHF 214
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAfgksaqFPLHF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 215 WTPDAYEGaPTPTTAYL--STVPKIGMYFLfVKLTmYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIA 292
Cdd:COG1009 233 WLPDAMEG-PTPVSALLhaATMVKAGVYLL-ARLS-PLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 293 HAGYfLTALTAVDkhLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPP 372
Cdd:COG1009 310 QLGY-MFLALGVG--AYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 373 AAVFLGKLGIFFGLVKTDMFA--LGILFAIASLISAGYYLKVIVYMFLysGEVRHGQTT----VSAGEAFTVLGTAFLVI 446
Cdd:COG1009 386 FAGFFSKEAILEAALEAGGLGplLLAVALLGAFLTAFYSFRLFFLVFF--GKPRPKTPKhpheSPWLMTLPLVVLAVLSL 463
|
410
....*....|....*...
gi 2983744 447 FFGLFPHVVLDFILRALS 464
Cdd:COG1009 464 VLGLLLPGLLEGLLAPAA 481
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
65-460 |
1.10e-21 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 98.46 E-value: 1.10e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 65 VDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELpYLYLIATLGLMV-MISSDNLAIIFTGLELASITMYILVGLFR 143
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLGNF-YVYLLLFMGAMLgVVLSDNLIVLYLFWELTSISSFLLISYWY 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 144 REYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVL------SPVKEENTLFALGVILIISALALKVSAVPFHFWTP 217
Cdd:PRK12645 155 EREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIremianADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 218 DAYEgAPTPTTAYL--STVPKIGMYfLFVKLTMyLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAG 295
Cdd:PRK12645 235 DAME-APTPVSAYLhsATMVKAGIY-LVARFTP-IFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 296 YFLTALTavdkhLFSALLFY----VFVYALATVGA--------------FTVLAILEKKEGwTHHFLDFKGLKEENPVLA 357
Cdd:PRK12645 312 LIMSLLG-----IGAASLHYqgddSKIYAAAITAAifhlinhatfkgslFMIVGIVDHETG-TRDIRKLGGLMTIMPITF 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 358 SMLALFLFALIGIPPAAVFLGKLGIFFGLVKT---DMFAL---GILFAI----ASLISAGYYLKVIVYMFLysGEVRHGQ 427
Cdd:PRK12645 386 TIALIGALSMAGLPPFNGFLSKEMFFESMLNAteaNLFSLdtwGVLFPViawvASVFTFVYSIIFIFKTFF--GKYKPEQ 463
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2983744 428 TTVSAGEAF-------TVLgtAFLVIFFGLFPHVVLDFIL 460
Cdd:PRK12645 464 LPKKAHEAPigmlispIIL--ASLVVVFGLFPNILTNSII 501
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
62-417 |
2.01e-20 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 93.50 E-value: 2.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIgKLFILAVTGF-VLLSSYDYFSKKNSQ---YGELP--YLYLIATLGLMV-MISSDNLAIIFTGLELASIT 134
Cdd:PRK06525 70 GLVIDPVSVL-IGFVVVLLGLlVTLYSTGYMSPGNREhpvHEGTGryYAFLLLFIGAMAgLVYSSTLLGLLLFFEITGLC 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 135 MYILVGlFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTLFALGVILIISALALKVSA-VPFH 213
Cdd:PRK06525 149 SWALIS-YYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKSAqLPFY 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 214 FWTPDAYEgAPTPTTAYL--STVPKIGMYfLFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSI 291
Cdd:PRK06525 228 SWLPDAME-APTPASAYLhaASMVKVGVY-IFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 292 AHAGY-FLTALTAV--DKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALI 368
Cdd:PRK06525 306 TQLGYmFFGLSLAIlgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2983744 369 GIPPAAVFLGKLGIFFGL-----VKTDMFALGILFAIASLISAGYYLKVIVYMF 417
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGfelsvEYWILLPAMVLLLIESVASFAWFLRWFGRVV 438
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
109-410 |
9.82e-20 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 90.27 E-value: 9.82e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 109 TLGLMVMISSDNLAIIFTGLELASITMYILvglfrreyLSK-------EGAFKYLVIGTTGTSMYALGSALVYASSGSMV 181
Cdd:MTH00112 14 ILGTIITISSNHWLMAWTGLEINTLAIIPL--------ISKphhpratEAATKYFLTQAAASALILFSSTTNAWNTGQWD 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 182 LSPVKEENTLfalgvILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGmyflfvKLTMyLFSAFPDWKYVV 261
Cdd:MTH00112 86 ITQLTNPTSC-----TLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLA------PLTL-LLMTSNSLNPTL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 262 ML-LAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKhlFSALLFYvfVYALATVGAFTVLAILEKKE--- 337
Cdd:MTH00112 154 LLtLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPK--LTLLTFY--IYILMTTPMFLTLNTTSTKTlkd 229
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2983744 338 ---GWTHhfldfkglkeeNPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYL 410
Cdd:MTH00112 230 mmtSWTK-----------SPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYL 294
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
101-412 |
2.19e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 89.26 E-value: 2.19e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 101 LPYLYLIATLGLMVMISSDNLAIIFTGLELasITMYILVGLFRREY-LSKEGAFKYLVIGTTGTSMYALGSALVYASSGS 179
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEI--NTLAIIPLLIKQHHpRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 180 MVLSPvkeenTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFSAFpdwky 259
Cdd:MTH00200 84 WGISE-----MLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNI----- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 260 vVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALtavdkhLFSALLF--YVFVYALATVGAFTVLAILEkke 337
Cdd:MTH00200 154 -LLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL------VYSPNLAllYLLLYVIITLTVFLLLNLLN--- 223
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2983744 338 gwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKV 412
Cdd:MTH00200 224 --STKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRL 296
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
62-407 |
4.00e-19 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 90.36 E-value: 4.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFsKKNSQYGELpYLYLIATLGLMV-MISSDNLAIIFTGLELASITMYILVG 140
Cdd:PRK12647 59 SFLLDGLSLTFALLITGIGTLIVLYAGGYL-KGHPDLGRF-YSYILLFMASMLgLVLSDNLITLFVFWELTSITSFLLIG 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 141 LFRREYLSKEGAFKYLVIgtTGTSMYAL--GSALVYASSGSMVLSP------VKEENTLFALGVILIISALALKVSAVPF 212
Cdd:PRK12647 137 FNHEREAARRAALQALLV--TGGGGLALlaGLILLGNVTGTYSLSEllasgdVIREHPLYLAILLLVLGGAFTKSAQFPF 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 213 HFWTPDAYEgAPTPTTAYL--STVPKIGMYfLFVKLTMYLfSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSS 290
Cdd:PRK12647 215 HFWLPNAME-APTPVSAYLhsATMVKAGIY-LLARLNPVL-GGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 291 IAHAGyFLTALTAV-DKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIG 369
Cdd:PRK12647 292 VSALG-TLVMLLGLgSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330 340 350
....*....|....*....|....*....|....*...
gi 2983744 370 IPPAAVFLGKLGIFFGLVKTDMfaLGILFAIASLISAG 407
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPL--WSLILTVAAVLGNA 405
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
110-451 |
1.60e-18 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 86.52 E-value: 1.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 110 LGLMVMISSDNLAIIFTGLELASITMY-ILVGLFRREylSKEGAFKYLVIGTTGTSMYaLGSALVYA--SSGSMVLSPVK 186
Cdd:MTH00041 15 LGTIIVISSNHWFLIWLGLELNTLSIIpILSSNFSPR--SVEATIKYFLVQAFSAAIL-LNGALIQAwlSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 187 EentlfaLGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFSafpdwkYVVMLLAV 266
Cdd:MTH00041 92 T------LSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNS------NILILCGI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 267 LSMFYGNIVAYAQKSVKRLLAYSSIAHAGYfltaLTAVDKHLFSALLFYVFVYALATVGAFTVLAILEkkegwTHHFLDF 346
Cdd:MTH00041 160 LSVLVGGWGGLNQTQTRKILAFSSIAHLGW----IIITSAYSPNASIIMFLIYIIINTSIFLIGNNFS-----LSTLSHL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 347 KGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYL--------------KV 412
Cdd:MTH00041 231 NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLrisfntsltlfpqhSI 310
|
330 340 350
....*....|....*....|....*....|....*....
gi 2983744 413 IVYMFLYSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLF 451
Cdd:MTH00041 311 SLFSWRNSGNITVYGVILSILSSISILGLLLIPLFLSFL 349
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
75-460 |
6.95e-18 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 86.42 E-value: 6.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 75 FILAVTGFVLLS-SYDYFSKKNsqygELP--YLYLIATLGLMV-MISSDNLAIIFTGLELASITMYILVGLFRREYLSKE 150
Cdd:PRK12649 87 LIASGIGVIIMSySNGYMSHKE----DLPryYQYLLLFMGSMIgMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVY 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 151 GAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKE---------ENTLFALGVILIISALALKVSAVPFHFWTPDAYE 221
Cdd:PRK12649 163 GATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQdselienikGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 222 gAPTPTTAYL--STVPKIGMYflFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLT 299
Cdd:PRK12649 243 -APTPVSAFLhsATMVKAGVY--LVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMT 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 300 ALTAVDKHL----FSALLFYVFVYALATVGAFTVLAILeKKEGWTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAV 375
Cdd:PRK12649 320 MYGYTTYHEpglgVAAATFHLLNHATFKACLFLVAGIV-AHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNG 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 376 FLGK-------------LGIFFGLVKTDMFALGILFAIAslisagYYLKVIVYMFLysGEVRHGQTTVSAGEA-FTVLGT 441
Cdd:PRK12649 399 FLSKemfyetsvemgalIGGPFTIIIPAVAVLGGVFTFA------YSIKLIDGIFL--GERTHDHLPHHIHEApYVMLIP 470
|
410 420
....*....|....*....|...
gi 2983744 442 A----FLVIFFGLFPHVVLDFIL 460
Cdd:PRK12649 471 AaflaGLVILFGLVPSIPIHNII 493
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-452 |
5.65e-17 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 83.82 E-value: 5.65e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLyLIATLGLMV-MISSDNLAIIFTGLELASITMYILVGL 141
Cdd:PRK12644 70 FRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLGRFAAE-LVAFAGAMFgLVTSDNLLLLYVFWELTTVLSFLLIGH 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 142 FRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEEN---TLFALGVILIISALALKVSAVPFHFWTPD 218
Cdd:PRK12644 149 YAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPptgPAVSVAVVLILVGALSKSAIVPFHFWLPG 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 219 AYEgAPTPTTAYL--STVPKIGMYfLFVKLTMyLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGy 296
Cdd:PRK12644 229 AMA-APTPVSAYLhaAAMVKAGIY-LVARLAP-GFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLG- 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 297 FLTALTAVDKH-LFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAV 375
Cdd:PRK12644 305 FLTVLVGIGTRdAALAGLAMLLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLG 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 376 FLGKLGIFFGLVKTDMFALGILFAIA-----SLISAGYYLKvivymFLYSGEVRHGQTTVS-AGEAFTVLGTAFLV---- 445
Cdd:PRK12644 384 FVAKEAALEAVLHDGALGPAGPVVLAgivlgSILTVAYSLR-----FLWGAFARKPGAFPSvAVTEMHRPSPLFLAppav 458
|
410
....*....|..
gi 2983744 446 -----IFFGLFP 452
Cdd:PRK12644 459 lavlgLVLGLLP 470
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
63-417 |
8.66e-17 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 83.27 E-value: 8.66e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSqygELPYLYLIATLGLMVMIS---SDNLAIIFTGLELASITMYILV 139
Cdd:PRK12646 74 LRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKD---NLPRFYFYLTLFMFSMIGivlSDNTILMYVFWELTSVSSFLLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 140 GLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKE------ENTLFALGVILIISALALKVSAVPFH 213
Cdd:PRK12646 151 SYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGqadhikNHGLFIPMIFMFLLGAFTKSAQFPFH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 214 FWTPDAYEgAPTPTTAYL--STVPKIGMYFLFVKLTMYLFSAFpdWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSI 291
Cdd:PRK12646 231 IWLPRAMA-APTPVSAYLhsATMVKAGIFLLFRFTPLLGLSNM--YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 292 AHAGYFLT--------------ALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLA 357
Cdd:PRK12646 308 SQLGMIMAmvgigggyaqhqqdAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAG-TRDIRILSGMRQLFPKMN 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2983744 358 SMLALFLFALIGIPPAAVFLGKLGIFFGLVKTD---------MFALGILFAIASLISAGYYLKVIVYMF 417
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFIGVIASIFTFTYALYMVKEVF 455
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
110-418 |
1.21e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 80.64 E-value: 1.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 110 LGLMVMISSDNLAIIFTGLELASITMYILVgLFRREYLSKEGAFKYLVIgttgtsmYALGSALVYASSGSMVLSPVKEEN 189
Cdd:MTH00160 16 MGTLISISSNSWFGAWMGLEINLLSFIPLI-SNKKNLMSSESSLKYFLI-------QALASIILLFSIILNMLNLMLFNN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 190 TLFalgvILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFsafpdwkyvVMLLAVLSM 269
Cdd:MTH00160 88 ISS----MLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNF---------IIIIIILSA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 270 FYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYalatvgaFTVLAILEKKEgwTHHFLDFKGL 349
Cdd:MTH00160 155 IIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIIS-------LSIILLFNKFN--IFFLNQLFNS 225
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2983744 350 KEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFL 418
Cdd:MTH00160 226 NNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLM 294
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
155-383 |
1.32e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 81.94 E-value: 1.32e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 155 YLVIGTTGTSMYALGSALVYASSGSMVLSPVKE------ENTLFALGVILIIsALALKVSAVPFHFWTPDAYEGAPTPTT 228
Cdd:PRK12665 166 YVMVSMVSSLLFLIGIALVYAATGTLNMADLAVrldelpSGTRTALFAVLLV-AFGIKAAVFPLSFWLPDSYPTAPAPVT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 229 AYLS-TVPKIGMYFLFVKLTMyLFSAFPDWKyVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKH 307
Cdd:PRK12665 245 AVFAgLLTKVGVYAIIRTHTL-LFPGGGLDT-LLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVA 322
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2983744 308 LFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIF 383
Cdd:PRK12665 323 GLSGAIYYVAHHITVQTTLFLVVGLIERQAG-SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
67-459 |
2.48e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 81.23 E-value: 2.48e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 67 ALNLIGKLFILAVTGFVLLSSYDYFSKKNSQyGELPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREY 146
Cdd:PRK06277 69 LFNPAKQIIIFVLSLIASLVLITGLGEKKSS-GLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEE 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 147 lSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVK------EENTLFALGVILIISALALKVSAVPFHFWTPDAY 220
Cdd:PRK06277 148 -AYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHnallvnPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIY 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 221 EGAPTPTTAYLSTVPKIGMYFLFVKL--TMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFL 298
Cdd:PRK06277 227 AKAKPFGSALLQTFSKFVLVALMLVIfkLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 299 TALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLG 378
Cdd:PRK06277 307 AGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTK-TSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQS 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 379 KLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFLY--SGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVL 456
Cdd:PRK06277 386 KLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYLKpkPEELEYKNKKVPKYAVFSLAVLTILCIILGLFPDLVT 465
|
...
gi 2983744 457 DFI 459
Cdd:PRK06277 466 NYL 468
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
104-420 |
4.37e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 78.95 E-value: 4.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 104 LYLIATLGLMVMISSDNLAIIFTGLELASITMYILVgLFRREYLSKEGAFKYLVigttgtsMYALGSALVYASSGSMVLs 183
Cdd:MTH00197 3 FLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLL-SQNKSITENEGAMKYFL-------FQEFGSALLLMGGSLSFS- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 184 pvkeENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFsafpdwkyVVML 263
Cdd:MTH00197 74 ----NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--------GLLI 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 264 LAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDkhlfSALLFYVFVYALATVGAFTVLailekKEGWTHHF 343
Cdd:MTH00197 142 CSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSP----SIFMLYYLIYFVIMFMLFLFL-----SKNNLSSL 212
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2983744 344 LDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFLYS 420
Cdd:MTH00197 213 NQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILS 289
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
189-411 |
2.76e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 76.88 E-value: 2.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 189 NTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFSafpdwkYVVMLLAVLS 268
Cdd:MTH00070 88 NMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNS------NLLIIMGLLS 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 269 MFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTaVDKHLfsaLLFYVFVYALATVGAFTVLAILEKKE------GWThh 342
Cdd:MTH00070 162 TLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILT-FSPHL---TLLNLLIYLIMTSSMFLMLMNLNSTNinklssSWS-- 235
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2983744 343 fldfkglkeENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLK 411
Cdd:MTH00070 236 ---------KNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLR 295
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
69-452 |
6.50e-15 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 77.14 E-value: 6.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 69 NLIGKLFILAVTGFVLLSSYDYFSKKNSQYgeLPYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRReylS 148
Cdd:PRK06459 44 GVLSFFSIISTIVWILASLYSIEYDHYGKW--LSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK---N 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 149 KEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTLfalgvILIISALALKVSAVPFHF--WTPDAYEGAPTP 226
Cdd:PRK06459 119 KRPAFVFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVPL-----ILASFGFIIKMGMMPFLVseWLPIAHGNAPSN 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 227 TTAYLSTVPKIGMYFLFVKLTMYLFSAFPDW-KYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTAL---- 301
Cdd:PRK06459 194 FSAILSATMTLMGVYGILKMTILTQTIPIGYfGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglym 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 302 ------TAVDKHLFSALLFYVFVYALATVGAFTVLAILEkKEGWTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAV 375
Cdd:PRK06459 274 vtkqliTSIEHFSLITVILYSFAHSVAKTGLFLSSGLQE-KQSITYSKKIRNRWIELGLTLLASSLSGLLPNIGGVASWL 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 376 FLGKLGIFF----GLVKTDMFALGILFAIASLISAGYYLKVIVymflYSGEVRHGQTTVSAGEAFTVLGTAFLVIFFGLF 451
Cdd:PRK06459 353 LLESLFMFAyvlhNVISILFIVTGAIIAMGEGLATALLIKYIT----YTSLFRNTKEQLSKIKKYPILLSALIVLILGFT 428
|
.
gi 2983744 452 P 452
Cdd:PRK06459 429 L 429
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-420 |
1.06e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 76.01 E-value: 1.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 59 FFDGFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIATLGLMVMIS-SDNLAIIFTGLELASITMYI 137
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIAlSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 138 LVGlFRREYLSKEGAFKYLVIGT-TGTSMYALGSALVYASSGSM--VLSPVKEENTLFALGVILIisALALKVSAVPFHF 214
Cdd:PRK06589 155 LIG-HTRNNISLSGGYKYLKILMiSALLLFLPAVILIYTKTGNLdfVSGGLFSKNQSIILLLMFI--YGIAKTAIFPVHS 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 215 WTPDAYEgAPTPTTAYLST--VPKIGMyFLFVKLTMYLF-----SAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLA 287
Cdd:PRK06589 232 WLPAAMV-AHYPVSALLHAviVVKTGL-FCIYKILLYIFglsylQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 288 YSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFAL 367
Cdd:PRK06589 310 YSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKK-EDQVDKLHGTSKSFPLISFIISISSLSL 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2983744 368 IGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIA----SLISAGYYLKVIVYMFLYS 420
Cdd:PRK06589 389 IGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviasSILSALYLLKILSSIYKPS 445
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
109-417 |
1.18e-14 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 74.82 E-value: 1.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 109 TLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSkEGAFKYLVIgttgtsmYALGSALVYASSGSMVLSPVKEE 188
Cdd:MTH00011 16 TLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQES-EAAVKYFLA-------QALGSGLLLLGMTMMWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 189 NTlfalGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGmyflfvKLTMYLFSAFPDWKYVVMLLAVLS 268
Cdd:MTH00011 88 NI----TALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIA------PLSILFFFTSHNILPMMTSMAAMS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 269 MFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVdkhlFSALLFYVFVYALATVGAFTVLAILEKKEgWTHHFLdfkg 348
Cdd:MTH00011 158 ALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFS----PSMAILYFMTYIIITTPLMLLFAYLNAFS-TKFNSK---- 228
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2983744 349 LKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMF 417
Cdd:MTH00011 229 ISSMSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFM 297
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
61-453 |
3.21e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 71.65 E-value: 3.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 61 DGFSVDALNLIGKLFILAVtgfvllssydYFSKKNSQYGELPY-LYLIATLGLMVMISSDNLAIIFTGLELASITMYILV 139
Cdd:PRK06473 78 DGLSLPLLVLNSLLTLIAI----------YSSDESIQRPRFYYsLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 140 GLF---RREYlskeGAFKYLV-IGTTGTSMYALGSALVYAS-SGSMVLSPVKEEN-----TLFALGVILIisALALKVSA 209
Cdd:PRK06473 148 AIWggqRRGY----AATKFLLyTAISGILILVSFLGLVWLSgASSFDYEPLRSHTlplstQLLLLAPILV--GFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 210 VPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLfVKLTMYLFsaFPDWKYV---VMLLAVLSMFYGNIVAYAQKSVKRL 285
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLlKLGTYGL-LRFGVGLF--PEAWVYLapwLATWAVVSVLYGASCAIAQKDMKKM 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 286 LAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGL---KEENPVLASMLAL 362
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTG-SRDVDVLRGLlnpERGLPITGSLMIL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 363 FLFALIGIPPAAVFLGKLGIFFGlvKTDMFALGILFA-IASLISAGYYLKVIVYMFL--YSGEVRHgQTTVSAGEAFTVL 439
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLVFRG--SFPIFPVQTLLCmIGTGLTAVYFLLLVNRVFFgrLTAELSN-LPRVLWSERLPAL 454
|
410
....*....|....
gi 2983744 440 GTAFLVIFFGLFPH 453
Cdd:PRK06473 455 VLAVLIVVLGIQPS 468
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
102-413 |
4.21e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 70.26 E-value: 4.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 102 PYLYLIATLGLM-----VMISSdNLAIIFTGLE---LASITMYILVGLFRreylSKEGAFKYLVIGTTGTSMYALGSALV 173
Cdd:MTH00105 3 PLILIIIYLTLFlgtmiTMISS-HWLLAWIGLEmnmLAIIPILMKKHNPR----STEAATKYFLTQATASMLLMMAIIIN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 174 YASSGSMVLSpvkeeNTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIG----MYFLFVKLTMY 249
Cdd:MTH00105 78 LMYSGQWTIT-----KLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAplsiLYQISPSINPN 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 250 LfsafpdwkyvVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTavdkHLFSALLFYVFVYALATVGAFTV 329
Cdd:MTH00105 153 L----------LLTLAILSILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILP----YNPTLTLLNLLIYIIMTLTMFML 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 330 L------AILEKKEGWThhfldfkglkeENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASL 403
Cdd:MTH00105 219 LmlnsstTTLSLSHTWN-----------KTPLMTSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITAL 287
|
330
....*....|
gi 2983744 404 ISAGYYLKVI 413
Cdd:MTH00105 288 LNLYFYMRLI 297
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
21-412 |
4.33e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 70.94 E-value: 4.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 21 ILELFLERKHYKFLSVLA----FIFVVLSGYSIFFVNYPAKLFFDG-FSVDALNLIGKLfiLAVTGFVLLSSY------D 89
Cdd:PRK08676 12 FLRLGLLSRSHRLLNALAlghgLWHLGLSLWVLLVLPLPGYFMESRyLFIDHLGIFVVL--IASVVFILAALYargyvdH 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 90 YFSKKNSQYGELPYLYLIATLGLMVM---ISSDNLAIIFTGLELASITMYILVG-LFRREYLskEGAFKYLVIGTTGTSM 165
Cdd:PRK08676 90 LLSNGELDPENLKVFYLGFNLLLSVItfaFFSDNLALFWIFAELTTVFSAMLIAiLSARENI--DAALKYIFIASTAMIF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 166 YALGSALVYASS------GSMVLSPVKEENTLFALGVI-----LIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLS-T 233
Cdd:PRK08676 168 AFIGLIFLFSLTrqalgtGTLNWTELAAHASLLSPSVLgasflFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSgT 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 234 VPKIGMY-FLFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSAL 312
Cdd:PRK08676 248 VLNIGIYgILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWM 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 313 LFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMF 392
Cdd:PRK08676 328 LFHMLAHSLVKSGLFFSAGILHRQYR-SDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVW 406
|
410 420
....*....|....*....|...
gi 2983744 393 ALGI---LFAIASLISAGYYLKV 412
Cdd:PRK08676 407 LVLAvllLLLLAASSFAIFLLKA 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
31-300 |
5.62e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 70.75 E-value: 5.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 31 YKFLSVLAFIFVVLSGYSIFFVNYPAKLFF-DGFSVD-ALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIA 108
Cdd:PRK07234 26 DRNLALGMAIVSAVYALGLVASMVPLELTLlDNFGVTlRADALSGYFILTNALVTLAVIFYCWESAKTRFFYAQLLILHG 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 109 TLGLmVMISSDnLAIIFTGLELASITMYILVGLFRREyLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEE 188
Cdd:PRK07234 106 SVNA-AFVCAD-LISLYVALEVLSIATFLLVAYPRTD-RAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATA 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 189 NTlFALGviLIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLS-TVPKIGMYFLfVKLTMYLFSAFPdwkyVVMLLAVL 267
Cdd:PRK07234 183 DP-EAFA--LIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKAGVFPL-VRCALDVPGLDL----IVRIFGVG 254
|
250 260 270
....*....|....*....|....*....|...
gi 2983744 268 SMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTA 300
Cdd:PRK07234 255 TALLGVLFALLEKDLKRMLAFSTISQLGFILAA 287
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
62-379 |
1.26e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 69.99 E-value: 1.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIATLgLMVMISSDNLAIIFTGLELASITMYILVGL 141
Cdd:MTH00032 75 GLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFL-MMVLVTSDNYLQLFIGWEGVGVCSYLLVAF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 142 FRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSM---------VLSPVKEENTLFA------------LGVILII 200
Cdd:MTH00032 154 WTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLdfltfnggsVGSGIMDRGYYGGgayesplapfaiIGILLLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 201 SALAlKVSAVPFHFWTPDAYEGaPTPTTAYLSTVPKIGMYFLFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQK 280
Cdd:MTH00032 234 GCIG-KSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQN 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 281 SVKRLLAYSSIAHAGYFLTALTAVDKHLFSA--LLFYVFVYALATVGAFTVLAILEKKEgwtHHFLDFKGLKEENPVLAS 358
Cdd:MTH00032 312 DLKKVIAYSTCSQLGYMVLIIGIEGSHNVGLfhLVNHAFFKALLFLSAGSVIHSTTVDE---QDMRKMGGLIHSIPFTYT 388
|
330 340
....*....|....*....|.
gi 2983744 359 MLALFLFALIGIPPAAVFLGK 379
Cdd:MTH00032 389 MMLIGSFSIMGLPYLTGFYSK 409
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
124-417 |
2.17e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 68.82 E-value: 2.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 124 IFTGLELASITMYILVGLFRREYLSKEgAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKE---ENTLFALGVILII 200
Cdd:PRK07691 133 LFVFFEVMLMASYVLIVIGGTKIQLRE-SIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVkiaELSAGQTGLITVV 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 201 SAL-----ALKVSAVPFHFWTPDAYEGAPTPTTAYL-STVPKIGMYFLFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGNI 274
Cdd:PRK07691 212 AILflfvfATKAGLFPLYFWLPGSYYAPPIAIAALFgALLTKVGVYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVI 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 275 VAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENP 354
Cdd:PRK07691 292 GAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITG-TTDLKKMGGLIKRYP 370
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2983744 355 VLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMF 417
Cdd:PRK07691 371 VLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKGF 433
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
95-410 |
4.63e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 67.81 E-value: 4.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 95 NSQYGELPYLY----LIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGS 170
Cdd:PRK07363 99 IGENTERPRLYysliLLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEKRGYASIKFLIYTAVSGLLVLAAFL 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 171 ALVYAS-SGSMVLSPVKEENTLFALGVIL---IISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTV-PKIGMYflfvK 245
Cdd:PRK07363 179 GIVWLSgSTSFDYDAISTQNLSLNTQLILltgLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVlAKLGTY----G 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 246 LTMYLFSAFPD-WKYVVMLLAV---LSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYAL 321
Cdd:PRK07363 255 LLRFGLQLFPQtWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 322 ATVGAFTVLAILEKKEGwTHHFLDFKGLKEEN---PVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTdmFALGILF 398
Cdd:PRK07363 335 ILALLFHLVGIVERKVG-TRDLDVLNGLMNPIrglPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFST--FPIPTLL 411
|
330
....*....|...
gi 2983744 399 AI-ASLISAGYYL 410
Cdd:PRK07363 412 CIvASGLTAVYFV 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
62-417 |
5.42e-12 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 68.15 E-value: 5.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGelpyLYLIAT---LGLMVMISSDNLAIIFTGLELASITMYIL 138
Cdd:PRK12650 74 ALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTS----FYLLMTafmAAMLLLVLADDVVVLFVAWELVSLASFFL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 139 VGlfRREYLSKEGAFKYLVIGTTG--TSMYALGSALVYASSGS---MVLSPVKEENTLFALGVILIISALALKVSA-VPF 212
Cdd:PRK12650 150 IA--RSGSGGEAGSIRTLILTFFGglTLLAAVAIAATQTGTTSlsgILHSDVWAEKPGLTTVVAVLIAVAAFTKSAqFPF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 213 HFWTPDAYeGAPTPTTAYL--STVPKIGMYFLFVKLTmyLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSS 290
Cdd:PRK12650 228 HFWLPEAM-AAITPVSAFLhaAAVVKAGIYLLLRFSP--VFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 291 IAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGI 370
Cdd:PRK12650 305 VSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAAV 383
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2983744 371 PPAAVFLGKLGIFFGLVKTD-----MFALGILFAIASLISAGYYLKVIVYMF 417
Cdd:PRK12650 384 PPLFGFVSKEGMLTAFLEAPggnagVVLLLVGAALGAVFTFAYSARLVLGAF 435
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
112-301 |
1.76e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 66.29 E-value: 1.76e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 112 LMVMISSDNLAIIFTgLELASITMYILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTL 191
Cdd:PRK08667 125 LGVVASANTFSFLFF-WEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGI 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 192 FALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTMYLFSAFPDWKYVVMLLAVLSMFY 271
Cdd:PRK08667 204 LSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALL 283
|
170 180 190
....*....|....*....|....*....|
gi 2983744 272 GNIVAYAQKSVKRLLAYSSIAHAGYFLTAL 301
Cdd:PRK08667 284 GVIYALKEHDLKGLLAYSSIENIGIILMGI 313
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
194-418 |
4.23e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 64.06 E-value: 4.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 194 LGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTmylfsafPDWKYVVMLLAVLSMFYGN 273
Cdd:MTH00135 93 LPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIA-------PTNPTLLITLGLTSTLVGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 274 IVAYAQKSVKRLLAYSSIAHAGY------FLTALTAVdkhlfsALLFYVfvyaLATVGAFTVLAILEKKE------GWTh 341
Cdd:MTH00135 166 WGGLNQTQLRKILAYSSIAHLGWmilvlqFSPSLTLL------ALLTYI----IMTSSAFLTFKLNSSTKintlatSWT- 234
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2983744 342 hfldfkglkeENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIVYMFL 418
Cdd:MTH00135 235 ----------KAPALTALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTL 301
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
155-405 |
1.59e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 62.95 E-value: 1.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 155 YLVIGTTGTSMYALGSALVYASSGSM--------VLSPVKEENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTP 226
Cdd:PRK12666 164 YVAINLVASSLFLIGVGLIYGVTGTLnmadlaqrIAQLPAADRALLEAGAALLLVVFLIKAAMWPLNFWLPPAYAAASAP 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 227 TTAYLSTVPKIGMYFLfVKLTMYLFSA--------FPDWkyvVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFL 298
Cdd:PRK12666 244 VAALFAIMTKVGIYAI-LRLSTLLFGPeagasagfGQDW---LLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 299 TALTAVDKHLFSALLFYVFVYALATvGAFTVLAIL-----EKKEGWTHHFLDFKGLKEEN--------PVLASMLALFLF 365
Cdd:PRK12666 320 AAIGLGNPAATAAALYYLVHSTLAA-AALFLLADLverqrGAAADRLAVTPELYDLDEEEeeevgvaiPATMALLGLLFF 398
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2983744 366 ----ALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLIS 405
Cdd:PRK12666 399 icalALAGLPPLSGFLGKFALLQALLNPPGAGAAWWLWALVLLS 442
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
148-405 |
4.75e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.77 E-value: 4.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 148 SKEGAFkYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTLFALGVILIISALA---LKVSAVPFHFWTPDAYEGAP 224
Cdd:PRK08042 133 SKEGKL-WFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIgfgLLAGIIPLHGWVPQAHANAS 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 225 TPTTAYLSTVP-KIGMYFLfvkLTMYLFSAFPD--WKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTAL 301
Cdd:PRK08042 212 APAAALFSTVVmKIGLLGI---LTLSLLGGNAPlwWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 302 ------TAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGW--THH--FLDFKGLKEENPVLASMLALFLFALIGIP 371
Cdd:PRK08042 289 gagvtgIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWfrTGHrdIEKLGGIGKKMPVISIAMLVGLMAMAALP 368
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2983744 372 PAAVFLGKLGI---FFGLVKTDMFA---LGILFAIASLIS 405
Cdd:PRK08042 369 PLNGFAGEWVIyqsFFKLSNSGAFVarlLGPLLAVGLAIT 408
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
133-463 |
8.36e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 60.71 E-value: 8.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 133 ITMYILVGLFRREYLSKEGAFKYLVIGTTGT--------SMYALGSALVYASSGSMVLSPVKEENTLFALGVILiisALA 204
Cdd:MTH00226 165 IPMYLILGIWGSREEKMQAAYYFFFYTLIGSvlmllclfSLYNIHGTTDYLTLASCSHVVSEQTQKWIFLGIFL---AMA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 205 LKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLFVKLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVK 283
Cdd:MTH00226 242 VKIPIFPFHIWLPKAHVEAPVAGSVLLAGILlKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 284 RLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALF 363
Cdd:MTH00226 322 RLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHH-TRLIKYYRGLSITMPIWGTIMIVT 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 364 LFALIGIPPAAVFLGK-LGIFFGLVKTDMfaLGILFAIASLISAgyylkviVYMFLYSGEVRHGQTT--------VSAGE 434
Cdd:MTH00226 401 SLANVAVPPSGNFIGEyLSILSSFNWNPI--IGVFVCSGVILSA-------VYSFYFANRVTFGAPGnlitfardVNRRE 471
|
330 340
....*....|....*....|....*....
gi 2983744 435 AFTVLGTAFLVIFFGLFPHVVLDFILRAL 463
Cdd:MTH00226 472 FYITASMVFFAFLIGIYPIFILEVIQNSL 500
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
133-459 |
4.16e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 58.52 E-value: 4.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 133 ITMYILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGS---MVLSPVKEENTLFALGVILIISALALKVSA 209
Cdd:MTH00217 143 IPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTtdyQALCCLKIEKELQYFIFLGFFLSLAIKIPK 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 210 VPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFlFVKLTMYLFS-AFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLA 287
Cdd:MTH00217 223 IPFHIWLPQAHVEAPVAGSVILAGVLlKLGGYG-FIRFSWPLLPeASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 288 YSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFAL 367
Cdd:MTH00217 302 YSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHH-TRLIKYYRGMVITMPLFGILMLLLVLAN 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 368 IGIPPAAVFLGKLGIFFGLVKTDmFALGILFAIASLISAGY--YLKVIVYMFLYSGEVrHGQTTVSAGEAFTVLGTAFLV 445
Cdd:MTH00217 381 ASIPLSCNFVGEFLSLLAAFEYS-YIVGVLASLGMVLSAGYsiYLYNRVCFGAPSKYL-YFSRDLNRREFYVLLPLVFLI 458
|
330
....*....|....
gi 2983744 446 IFFGLFPHVVLDFI 459
Cdd:MTH00217 459 YLMGIFPFIIIDVI 472
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
202-463 |
3.51e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 55.45 E-value: 3.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 202 ALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFlFVKLTMYLF-SAFPDWKYVVMLLAVLSMFYGNIVAYAQ 279
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILlKLGGYG-FLRFSWPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQ 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 280 KSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTVLAILEKKegwtHH---FLDFKGLKEENPVL 356
Cdd:MTH00204 297 VDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYER----HHtrlIKYYRGLTLTMPLF 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 357 ASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFaLGILFAIASLISAGYYLKVIVYMFLYSGEVRHGQT-TVSAGEA 435
Cdd:MTH00204 373 VIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLG-LGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSrDLNRREL 451
|
250 260
....*....|....*....|....*...
gi 2983744 436 FTVLGTAFLVIFFGLFPHVVLDFILRAL 463
Cdd:MTH00204 452 LAILPLIIAIFLLGIVPFIIIDLVKNSL 479
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
63-295 |
4.74e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 55.58 E-value: 4.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSqygeLP--YLYLIATLGLMVMIS-SDNLAIIFTGLELASITMYILV 139
Cdd:PRK12648 72 LRLDGLAWLFALLILGIGLLVVLYARYYLSPADP----VPrfFSFLLLFMGAMLGIVlSGNLILLVVFWELTSLSSFLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 140 GLFRREYLSKEGAFKYLVI-GTTGTSMYAlGSALVYASSGSMVLSPVKE------ENTLFALGVILIISAlALKVSA-VP 211
Cdd:PRK12648 148 GYWHHRADARRGARMALTVtGAGGLALLA-GVLLLGHIVGSYDLDVVLAagdlirAHPLYPPALVLILLG-AFTKSAqFP 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 212 FHFWTPDAYeGAPTPTTAYL--STVPKIGMyFLFVKLTMYLfSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYS 289
Cdd:PRK12648 226 FHFWLPHAM-AAPTPVSAYLhsATMVKAGV-FLLARLWPVL-AGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYS 302
|
....*.
gi 2983744 290 SIAHAG 295
Cdd:PRK12648 303 TISHLG 308
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
118-305 |
4.96e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 55.04 E-value: 4.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 118 SDNLAIIFTGLELASITMYILVGLF---RREYlskeGAFKYLVIgTTGTSMYALGSALVYASSGSMV---LSPVKEENTL 191
Cdd:PRK12561 106 AQDLLLFFLMWELELVPVYLLISIWggqKRLY----AATKFILY-TALASIFILVAGLALALSGDTFtfdLAELGAKSYP 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 192 FALGVILIIS---ALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLfVKLTMYLFS-AFPDWKYVVMLLAV 266
Cdd:PRK12561 181 LALELLLYAGfliAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLlKMGGYAL-IRFNVQMLPdAHVYFAPALAILGV 259
|
170 180 190
....*....|....*....|....*....|....*....
gi 2983744 267 LSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVD 305
Cdd:PRK12561 260 VNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFT 298
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
2-296 |
9.71e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 54.52 E-value: 9.71e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 2 NWNAILPEA-ILAIGILTVfileLFLERKHYKFLSVLAFIFVVLSGYSIFFVNYPAKLFFDG----FSVDALNLigkLFI 76
Cdd:PRK12668 1 MMLDFLPPAlVFIAGALLV----PFLPGRARKALLLLAPVLAVLAVLTVPEGTYLTVTFLGFdlvlGRVDKLSR---VFG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 77 LAVTGFVLLSS-YDYFSKKNSQYGeLPYLYLIATLGlmVMISSDNLAIIFtGLELASITMYILVgLFRREYLSKEGAFKY 155
Cdd:PRK12668 74 LIFGIMAFIGViYALHVKDPGQHV-AALLYVGSALG--AVFAGDLLTLFV-FWELMAFTSTFLV-WARGTKAAVRAGFRY 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 156 LVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTLFALgviLIISALALKVSAVPFHFWTPDAYeGAPTPTTAylstvp 235
Cdd:PRK12668 149 LLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAW---LILIGFGVNAAFPPLHAWLPDAY-PEATVTGS------ 218
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2983744 236 kigmYFLFV---KLTMY-LFSAFPDWKYVVMLLAVLSMfYGNIVAYAQKSVKRLLAYSSIAHAGY 296
Cdd:PRK12668 219 ----VFLSAfttKTAVYaLARAFPGTELLIYIGAAMAV-YGVFFALLENDLRRLLSYHIVSQVGY 278
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
62-379 |
2.40e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 53.10 E-value: 2.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIAT--LGLMVmisSDNLAIIFTGLELASITMYILV 139
Cdd:PRK07376 86 GYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSsmLGLVI---SPNLVQIYVFWELVGMCSYLLV 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 140 GLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEE-NTLFALGVILIISALAL----------KVS 208
Cdd:PRK07376 163 GFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRlSELVSSGAVSGWLALLLcilvflgpmaKSA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 209 AVPFHFWTPDAYEGaPTPTTAYL--STVPKIGMyFLFVKltMY-LFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRL 285
Cdd:PRK07376 243 QFPLHVWLPDAMEG-PTPISALIhaATMVAAGV-FLVAR--MYpVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKG 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 286 LAYSSIAHAGYFLTAL-----TAVDKHL-----FSALLFY----VFVYALATVGAFTVLAILEKKEGwthhfldfkGLKE 351
Cdd:PRK07376 319 LAYSTISQLGYMVMAMgcgaySAGLFHLmthayFKAMLFLgsgsVIHGMEEVVGHDPVLAQDMRLMG---------GLRK 389
|
330 340
....*....|....*....|....*...
gi 2983744 352 ENPVLASMLALFLFALIGIPPAAVFLGK 379
Cdd:PRK07376 390 YMPITAITFLIGCLAISGIPPFAGFWSK 417
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
113-301 |
3.06e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.97 E-value: 3.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 113 MVMISSDNLAIIFtGLELASITMYILVGLFRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEEN-TL 191
Cdd:PRK06521 128 LVLLADDAFSFLV-AWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHlSP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 192 FALGVILIISAL--ALKVSAVPFHFWTPDAYEGAPTPTTAYLSTV-PKIGMYFlFVKLTMYLFSAfPD--WKYVVMLLAV 266
Cdd:PRK06521 207 FWASLVFLLALFgfGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVmLKVAIYG-ILRVVFDLLGA-PGwwWGVLVLALGA 284
|
170 180 190
....*....|....*....|....*....|....*
gi 2983744 267 LSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTAL 301
Cdd:PRK06521 285 ISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGL 319
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
120-413 |
3.49e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 52.40 E-value: 3.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 120 NLAIIFTGLELASITMYILVGLF---RREYlskeGAFKYlVIGTTGTSMYALGSALVYASSG-----SMVLSPVKEENTL 191
Cdd:PRK02546 136 DMLLFFLAWELELIPVYLLLAIWggkKRQY----AATKF-ILYTAGSSLFILLAALAMAFYGdtptfDMTALAAKDFGLG 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 192 FAL---GVILIisALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLFVKLTMYLFSAFPDWKYVVMLLAVL 267
Cdd:PRK02546 211 FQLlcyAGLLI--AYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILlKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVV 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 268 SMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALatVGA---FTVLAILEKkegwTHHFL 344
Cdd:PRK02546 289 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGL--IGAslfFLVGATYDR----THTLM 362
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2983744 345 --DFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVI 413
Cdd:PRK02546 363 ldEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPFRVVVVFLAAVGVILTPI 433
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-418 |
6.50e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 51.32 E-value: 6.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 106 LIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYlSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLSPV 185
Cdd:PRK06591 122 LFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPK-SLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDI 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 186 ------KEENTLFALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVPKIGMYFLFVKLTmYLFSAFPDWK- 258
Cdd:PRK06591 201 aaylqeHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFT-YIIIGYETIKt 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 259 ---YVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGY-FLTALTAVDKHLFSALLfyvFVYALATVGAFTVLAILE 334
Cdd:PRK06591 280 aitNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYvFLLYVTENGIIILPSLL---LADSINKIALFLIDAYNE 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 335 KKEgwthhfldfkglKEENPVLasmLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASLISAGYYLKVIV 414
Cdd:PRK06591 357 SYK------------REPNKVL---IIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVL 421
|
....
gi 2983744 415 YMFL 418
Cdd:PRK06591 422 LLFP 425
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
62-300 |
2.19e-06 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 50.08 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIaTLGLMVMISSDNLAIIFTGLELASITMYILVGL 141
Cdd:MTH00020 75 GLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLF-TFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 142 FRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSMVLS------PVKEENTLFALGVILIISALAlKVSAVPFHFW 215
Cdd:MTH00020 154 WLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSsvfnmvVSAPSSDITLICLFLFIGAVG-KSAQLGLHTW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 216 TPDAYEGaPTPTTAYL--STVPKIGMyFLFVKLTMyLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAH 293
Cdd:MTH00020 233 LPDAMEG-PTPVSALIhaATMVTAGV-FLLIRSSP-LFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQ 309
|
....*..
gi 2983744 294 AGYFLTA 300
Cdd:MTH00020 310 LGYMVVA 316
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
16-452 |
2.28e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 49.59 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 16 ILTVFILELFLERKHYKFLSVLAFIFVVLSGYSIFFVNYPAKLFFD---GFSVDALNLIGKLFILAVTGFVLLSSYDYFS 92
Cdd:MTH00205 3 IFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFissSFSFDSLSLPLIMLSFWISLLMVLASYKVFK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 93 KKNSQYGELpYLYLIATLGLMVMISSDNLAIIFTGLELASI--TMYILVGLFRREYLskeGAFKYLVIGTTGTSMYALGS 170
Cdd:MTH00205 83 SNKNSKLFT-VSVIMLLLILILSFSVDNLLLFYITFEASLIptLILILGWGYQPERL---QASMYMMMYTLCASLPLLIG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 171 aLVYASSGSMVLS---PVKEENTLFALGVILIISALA--LKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLfV 244
Cdd:MTH00205 159 -LFFLNSLNFSLSmffNFPLNFSDFYLFLYWIFLMLAflVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLlKLGGYGL-I 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 245 KLTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATV 324
Cdd:MTH00205 237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 325 GAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKtDMFALGILFAIASLI 404
Cdd:MTH00205 317 GMFALANVNYERTN-SRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLS-SSKISGIPLSLISFL 394
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2983744 405 SAGYylkvivYMFLYSgEVRHGQTTVSAGEAFTVLGTAFLVIFFGLFP 452
Cdd:MTH00205 395 SGAY------SLYLYS-QSQHGKVSSQISSFLAISEREYYILILHWFP 435
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
189-301 |
1.57e-05 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 47.58 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 189 NTLFAlgvilIISALALKVSAV------PFHFWTPDAYEGaPTPTTAYL--STVPKIGMyFLFVKLtMYLFSAFPDWKYV 260
Cdd:CHL00025 222 NLLFA-----TLCAFLLFLGPVaksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGI-FLVARL-LPLFIVIPYIMNL 293
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2983744 261 VMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTAL 301
Cdd:CHL00025 294 ISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 334
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
113-417 |
4.35e-05 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 45.92 E-value: 4.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 113 MVMISSDNLAIIFTGLELASITMYILVGLfrreYLSKE----GAFKYLVIGTTGTSMYALGSALVYASSGSM-------- 180
Cdd:PRK06590 129 LMLVLSDNLLQLFFGWEGVGLCSYLLIGF----WYKKPsagaAAMKAFIVNRVGDVGLALGIFLLFAEFGSLnydevfaa 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 181 -VLSPVKEENTLFALGVILIISALAlKVSAVPFHFWTPDAYEGaPTPTTAYL--STVPKIGMYflFVKLTMYLFSAFPDW 257
Cdd:PRK06590 205 aPQFFGLGWSALTLICLLLFIGAMG-KSAQFPLHTWLPDAMEG-PTPVSALIhaATMVTAGVY--LVARMSPLFELSPEA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 258 KYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTAL-----TAVDKHL-----FSALLFyvfvyalatVGAF 327
Cdd:PRK06590 281 LLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALgvgayAAAIFHLmthafFKALLF---------LGAG 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 328 TV-LAilekkegwTHHFLD---FKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFAIASL 403
Cdd:PRK06590 352 SViHA--------MHHEQDirkMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAGLVGAF 423
|
330
....*....|....
gi 2983744 404 ISAGYYLKVIVYMF 417
Cdd:PRK06590 424 LTAFYSFRLIFLVF 437
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
17-456 |
6.26e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 45.12 E-value: 6.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 17 LTVFILELFLERKHYKFLSVLAFIFVVLSGYSIFFVNYPAKLFFDGFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNS 96
Cdd:MTH00014 9 ISLLLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 97 QYGELPYLyLIATLGLMVMISSDNLAIIFTGLELASI-TMYILVGL-FRREYLSkegAFKYLVIGTTGTSMYALGS--AL 172
Cdd:MTH00014 89 PKTFMTNI-LILNLILLLTFSASNLLMFYIFFEASLIpTLFLILGWgYQPERLQ---ASFYLMIYTVTASLPLLMSilLI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 173 VYASSGSMVLSPVKEENTLFALGVILIISALALKVSAVPF--HFWTPDAYEGAPTPTTAYLSTVP-KIGMY------FLF 243
Cdd:MTH00014 165 FYTNNSLSMLMSSMEPPSIYLMNLWWLITILAFMVKMPLYtvHLWLPKAHVEAPVAGSMILAGILlKLGGYgllrmsSLF 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 244 VKLTMYLFSAFpdwkyvvMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALAT 323
Cdd:MTH00014 245 MHINKSLSAPF-------SSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCS 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 324 VGAFtVLAILEKKEGWTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALgILFAIASL 403
Cdd:MTH00014 318 SALF-ALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTA-ILLAITSF 395
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2983744 404 ISAGYYLkvivymFLYSGeVRHGQTTVSAGEAFTVLGTAFLVIFFGLFPHVVL 456
Cdd:MTH00014 396 LAAAYSL------FLYTS-TQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFIL 441
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
202-418 |
8.20e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 44.95 E-value: 8.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 202 ALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLFVKLTMyLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQK 280
Cdd:MTH00127 203 AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMRMMVM-LDPLTKELSYPFIILALWGIIMTGSICLRQT 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 281 SVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATVGAFTvLAILEKKEGWTHHFLDFKGLKEENPVLASML 360
Cdd:MTH00127 282 DLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFC-LANTNYERTHSRTMLLARGLQMILPLMATWW 360
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2983744 361 ALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALgILFAIASLISAGYYLkvivYMFL 418
Cdd:MTH00127 361 FIASLANLALPPLPNLMGELMIITSLFNWSPWTL-ALTGLGTLITAGYSL----YMFL 413
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
192-298 |
1.06e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.55 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 192 FALGVILIIS---ALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTVP-KIGMYFLfVKLTMYLF----SAFPDWkyvVML 263
Cdd:CHL00011 207 VALEILFYIGfliAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILlKMGAYGL-IRINMELLphahSIFSPW---LVI 282
|
90 100 110
....*....|....*....|....*....|....*
gi 2983744 264 LAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFL 298
Cdd:CHL00011 283 VGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII 317
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
63-301 |
1.07e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 44.56 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 63 FSVDALNLIGKLFILAVTGFVLLSSYDYFSK--KNSQYGELPYLYLIAtlgLMVMISSDNLAIIFTGLELASITMYILVG 140
Cdd:MTH00211 75 FKFDFYSIFFTSVALYVTWSILEFSLWYMSSepNINRFFKYLLLFLIF---MLILVSANNLFQLFIGWEGVGIMSFLLIS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 141 L-FRREYLSKEG--AFKYLVIGTTGTSMYALGSALVYASSGSMVLSPVKEENTLFALGVILIISAlalKVSAVPFHFWTP 217
Cdd:MTH00211 152 WwYGRSDANTAAlqAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMG---KSAQFGFHPWLP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 218 DAYEGaPTPTTAYL--STVPKIGMYFL--FVKLTMYLFSAFpdwkYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAH 293
Cdd:MTH00211 229 SAMEG-PTPVSALLhsSTMVVAGVFLLirLSPLFQNNQLIL----GAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQ 303
|
....*...
gi 2983744 294 AGYFLTAL 301
Cdd:MTH00211 304 LGLMMVTL 311
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
196-417 |
1.65e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 43.87 E-value: 1.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 196 VILIISALALKVSAVPFHFWTPDAYeGAPTPTTAYL--STVPKIGMYfLFVKLTMYLFSaFPDWKYVVMLLAVLSMFYGN 273
Cdd:MTH00209 178 SVLIVLAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhsSTLVTAGVY-LLIRFFPSLFS-SPFFSMSLLLLGSLTTLMAS 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 274 IVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLfsaLLFYVFVYALATVGAFTVLAILEKKEGwthHFLDFK---GLK 350
Cdd:MTH00209 255 MSANVESDLKKIIALSTLSQLGLMMCSLGLNQPEL---AFFHLITHALFKALLFICAGNIIHSHG---HSQDIRmvgNLW 328
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2983744 351 EENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDM-FALGILFAIASLISAGYYLKVIVYMF 417
Cdd:MTH00209 329 YQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMpIMTLILMFLSTSLTAAYSMRLSYFSL 396
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
62-314 |
2.61e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 43.46 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 62 GFSVDALNLIGKLFILAVTGFVLLSSYDYFSKKNSQYGELPYLYLIaTLGLMVMISSDNLAIIFTGLELASITMYILVGL 141
Cdd:MTH00210 75 GLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLF-TFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINF 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 142 FRREYLSKEGAFKYLVIGTTGTSMYALGSALVYASSGSM-------VLSPVKEENTLFALGVILIISALAlKVSAVPFHF 214
Cdd:MTH00210 154 WLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLefstissLLVTNINKESLTIICLLLFIGAVG-KSAQLGLHT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 215 WTPDAYEGaPTPTTAYL--STVPKIGMyFLFVKlTMYLFSAFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIA 292
Cdd:MTH00210 233 WLPDAMEG-PTPVSALIhaATMVTAGV-FLIIR-SGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCS 309
|
250 260 270
....*....|....*....|....*....|..
gi 2983744 293 HAGY---------FLTALTAVDKH-LFSALLF 314
Cdd:MTH00210 310 QLGYmvmvcgisnYSTSLFHLMNHaFFKALLF 341
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
14-452 |
3.25e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 43.00 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 14 IGILTVFILELFLERKhYKFLSVLAFIFVVLSGYSIFF---VNYPAKLFFDGFSVDALNLIGKLFILAVTGFVLLSSYDY 90
Cdd:MTH00206 4 IPLIMLLLMTILSKKK-WLWRSTTFFSFLIALLFLLWFkwsSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 91 FSKKNSQYGEL-PYLYLIATLGLMVMISSDNLAIIFTGLELASITMYILVGLFRREYlSKEGAFKYLVIGTTGTS---MY 166
Cdd:MTH00206 83 MKNEPINRQRIyITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQK-ERLNAGYYFLFYTLIGSlplLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 167 ALGSALVYASSGSMVLSPVKEENTLF-ALGVILIISALALKVSAVPFHFWTPDAYEGAPTPTTAYLSTV-PKIGMYFLFV 244
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILYFSKLTTWNnNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVlLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 245 KLTMYLFSaFPDWKYVVMLLAVLSMFYGNIVAYAQKSVKRLLAYSSIAHAGYFLTALTAVDKHLFSALLFYVFVYALATV 324
Cdd:MTH00206 242 IILILGPS-TKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2983744 325 GAFTVLAILEKKEGwTHHFLDFKGLKEENPVLASMLALFLFALIGIPPAAVFLGKLGIFFGLVKTDMFALGILFaIASLI 404
Cdd:MTH00206 321 ALFCLANLLYERSH-TRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLG-LGFLF 398
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2983744 405 SAGYYLkvivYMFLYSGevrHGQTTVSAGEAFTVLGTAFLVIFFGLFP 452
Cdd:MTH00206 399 TAIYSL----YMFVMTQ---HGKTPNHLLSLSPSSTREHLLLFLHLFP 439
|
|
| |
