|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-741 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1487.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 1 MEQTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 81 FSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 161 LIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGLTKHVPITKNSFLL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 401 GTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNYSGKRNTPFYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 481 KEGSKISNKNFRLVTllkLKNNGRPSFFSNKVYKIDENVRNMIQPFlsIPHFGNTKIYSYPYESDNTMLFPILILILFTL 560
Cdd:CHL00025 481 KEESKKINKLLLLLT---MNNNERVSFFSKKTYKIDGNVRNMIRSF--ITIFGNKKTFSYPHESDNTMLFPLLVLVLFTL 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 561 FVGFLGIPFNH---DVDILSKWLTPSINLLHKNSNNSIDWYEFCKDAVFSVSIASFGIFIAFFLYKPVYSSFQNLDLINS 637
Cdd:CHL00025 556 FVGFIGIPFNQegiDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINS 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 638 FVKMGPKRIFSDKIKNAIYDWSYNRGYIDAFYETFLTVGMRKLAEFAHFFDRRIIDRIPNGVGLMNFFVAEVIKSVGGGR 717
Cdd:CHL00025 636 FVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGR 715
|
730 740
....*....|....*....|....
gi 847704 718 ISSYLFFYFSYVSIFLFIYYFFNL 741
Cdd:CHL00025 716 ISSYLFLYLFYVSIFLLILYFFFS 739
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-736 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 696.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 1 MEQTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 81 FSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 161 LIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGLTKHVPITKNSFLL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 401 GTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGhlnvhfqNYSGkrntpfysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG------------- 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 481 kEGSKISNKnfrlvtLLKLKNNGRPSFFSNKVYKIDENvrnmiqpflsipHFGNtkiysyPYESDNTMLFPILILILFTL 560
Cdd:PRK07376 461 -NDKELQKE------LLAAADAPGHHEGHHEEHGEHHH------------HSGS------PHESPWTMTLPLVVLAVPSV 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 561 FVGFLGIPFNHDVDILSKWLTPSINLLHknsnnSIDWYEFCKDAVFSVSIASFGIFIAFFLYkpvyssFQNldlinsfvK 640
Cdd:PRK07376 516 LIGLLGTPWNNRFEAFLHAPGEALEAAA-----HFEWGEFLILAGASVGIALIGITLASLMY------LLK--------K 576
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 641 MGPKRIfSDKIKnAIYDWSYNRGYIDAFYETFLTVGMRKLAEFAHFFDRRIIDRIPNGVGLMNFFVAEVIKSVGGGRISS 720
Cdd:PRK07376 577 IDPAAI-AERFP-PLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGRAQF 654
|
730
....*....|....*.
gi 847704 721 YLFFYFSYVSIFLFIY 736
Cdd:PRK07376 655 YALIVFGAVLGLVIVF 670
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-735 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 567.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 5 YQYAWIIPFLPLpvpmligLGLLLFPTATKSLRRMWAFqsvLLLSIVMIFSMNLSIH---QINSSSVYQYVWSWIINNDF 81
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAG---WLAALAPLAAFVLSLLlfpAVLGGEVVVELYTWIPVGSL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 82 SLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLL 161
Cdd:COG1009 71 GLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISnnevnFVFVTLCAVLLFAGAIAKS 241
Cdd:COG1009 151 IGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILS-----SPLLTLILLLLLLGAFGKS 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:COG1009 226 AQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAY 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 322 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFLLG 401
Cdd:COG1009 306 STVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIG 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 402 TLSLCGIPPLACFWSKDEILNDSW---LYSSIFAIIAWSTAGLTAFYMCRIYLLTFeghlnvhfqnysgkrntpfysisl 478
Cdd:COG1009 377 ALSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------ 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 479 WGKEGSKISNKnfrlvtllklknngrpsffsnkvykidenvrnmiqpflsiphfgntkiysyPYESDNTMLFPILILILF 558
Cdd:COG1009 433 FGKPRPKTPKH---------------------------------------------------PHESPWLMTLPLVVLAVL 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 559 TLFVGFLGIPFNHDVDILSKWLTPSINLLHKNSNNSIdwyefckdaVFSVSIASFGIFIAFFLYKPVYSSFQNLdlinsf 638
Cdd:COG1009 462 SLVLGLLLPGLLEGLLAPAAVLGGELHLAHGLLLNAL---------PLLLSLLGIALGYLLYLKRPLPALAERL------ 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 639 vkmgpkrifsdkikNAIYDWSYNRGYIDAFYETFLTVGMRKLAEFAhFFDRRIIDRIPNGVGLMNFFVAEVIKSVGGGRI 718
Cdd:COG1009 527 --------------KPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYL 591
|
730
....*....|....*..
gi 847704 719 SSYLFFYFSYVSIFLFI 735
Cdd:COG1009 592 QFYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-724 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 540.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 7 YAWIIPFLPLpvpmlIGLGLLLFptatkSLRRMWAFQSVL----------LLSIVMIFSMNLSIHQinssSVYQYVWSWI 76
Cdd:PRK06590 4 LLWLIVLLPL-----IGALILGL-----FGRRIGEKWAHLvgtglvglsaLLSLVVFFDFLLGGGR----AFSQTLWTWI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 77 INNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGI 156
Cdd:PRK06590 70 SVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGL 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 157 CSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfqIFNNLISNNEVNFVFVTLCAVLLFAG 236
Cdd:PRK06590 150 CSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDE---VFAAAPQFFGLGWSALTLICLLLFIG 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 237 AIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIK 316
Cdd:PRK06590 227 AMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIK 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 317 RGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMEtlvgycpkKSQNMVLMGGLTKHVPITKN 396
Cdd:PRK06590 307 RVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYA 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 397 SFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFA-IIAWSTAGLTAFYMCRIYLLTFEG---HLNVHfqnysgkrntp 472
Cdd:PRK06590 379 TFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHGkekEKIHH----------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 473 fysislwgkegskisnknfrlvtllklknngrpsffsnkvykidenvrnmiqpflsiphfgntkiysyPYESDNTMLFPI 552
Cdd:PRK06590 448 --------------------------------------------------------------------PHESPAVMTLPL 459
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 553 LILILFTLFVGFLGIPFNHDvdilskWLTPSINLLHKNSNNSIDWYefCKDAVFSVSIAsfGIFIAFFLYKpvyssfQNL 632
Cdd:PRK06590 460 IVLAVLSVFAGALIVPPFLG------VLPLTTELAHGEAEHHLPVW--VALLPLVVALA--GIALAWLLYL------KKP 523
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 633 DLINSFVKMGPkrifsdkiknAIYDWSYNRGYIDAFYETFLTVGMRKLAEFA-HFFDRRIIDRIPNGVGLMNFFVAEVIK 711
Cdd:PRK06590 524 TLPTSIAAPGR----------FLYTLLRNKYYFDELYEKVFVKPGLALARLLwKDGDDGIIDGLVPNSARLVGGGSRVLR 593
|
730
....*....|...
gi 847704 712 SVGGGRISSYLFF 724
Cdd:PRK06590 594 RLQTGYLRHYAAS 606
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-726 |
7.82e-156 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 465.60 E-value: 7.82e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 44 SVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLR 123
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 124 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSF 203
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 204 EFRDLFQIFNNlisnneVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:TIGR01974 196 NFQEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 284 FIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSV 363
Cdd:TIGR01974 270 FELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSV 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 364 IHSMEtlvgycpkKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSwlYSSIFAIIAWS----TA 439
Cdd:TIGR01974 350 IHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAA--FASGTHSFLFVagliGA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 440 GLTAFYMCRIYLLTFEGHLNVHfqnysgkrntpfysislwgkegskisnknfrlvtllklknngrpsffsnkvykidenv 519
Cdd:TIGR01974 420 FLTAFYSFRLIFMVFHGKERHE---------------------------------------------------------- 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 520 rnmiqpflsiphfgntkIYSYPYESDNTMLFPILILILFTLFVGFLGIPFNHDV-DILSKWLTPSINLLHKNSnnsidwy 598
Cdd:TIGR01974 442 -----------------ADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLkGVLPTSAEPALEHHHVPA------- 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 599 eFCKDAVFSVSIAsfGIFIAFFLYkpvyssfqnldlinsfVKMGPKRIFSDKIKNAIYDWSYNRGYIDAFYETFLTVGMR 678
Cdd:TIGR01974 498 -LEIWSPTAVAIL--GILLAYLLY----------------LGNPTLPAKIAQRHSGLYRLLLNKWYFDELYDKVFVKPYL 558
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 847704 679 KLAEFAHFF-DRRIIDRIPNGVGLMNFFVAEVIKSVGGGRISSYLFFYF 726
Cdd:TIGR01974 559 FLGKLLWKDpDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRWYAASMV 607
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-688 |
2.49e-150 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 437.43 E-value: 2.49e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 448 RIYLLTFEGHLNVHFQNYSGKRNTPFYSISLWGKEGSKISNKNFRLVTLLKLKNNGRPSFFSNKVYKIDENVRNMIQPFL 527
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 528 SIPHFGNTKIYSYPYESDNTMLFPILILILFTLFVGFLGIPFNH---DVDILSKWLTPSINLLHKNSNNSIDWYEFCKDA 604
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQegiDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 605 VFSVSIASFGIFIAFFLYKPVYSSFQNLDLINSFVKMGPKRIFSDKIKNAIYDWSYNRGYIDAFYETFLTVGMRKLAEFA 684
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 847704 685 HFFD 688
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-739 |
1.41e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 348.54 E-value: 1.41e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 63 INSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 143 NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVn 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 223 fvfvTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITV 302
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 303 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 383 LMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSW-LYSSIFAI-IAWSTAGLTAFYMCRIYLLTFeghlnv 460
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTF------ 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 461 hfqnysgkrntpfysislwgkegskISNKNFRLVTLLKLknngrpsffsnkvykidenvrnmiqpflsiphfgntkiysy 540
Cdd:MTH00210 433 -------------------------ITNTNSKKEVFIGV----------------------------------------- 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 541 pYESDNTMLFPILILILFTLFVGFLGIPFnhdvdILSKWLTPSInllhknsNNSIDWYEFckdaVFSVsiasFGIFIAFF 620
Cdd:MTH00210 447 -HESSWNITFPLLLLAFGSIFVGYLGKEV-----VLSNVIPPIV-------PNSIKMIPL----LFSL----LGALLAFV 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 621 LYkpvYSSFQNLDLINSFVKMGPKRIFSDKIKNAiydWSYNrgYIdafYETFLTVGMRKlaeFAHFFDRRIIDR------ 694
Cdd:MTH00210 506 IY---NSMVFLIKISRRGVSIRLYHVIYTFLNSA---WQFN--YV---INHFIVKNIWK---FGHLITYRIIDRglleii 571
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 847704 695 IPNGVGLMNFFVAEVIKSVGGGRISSYLFFYFSYVSIFLFIYYFF 739
Cdd:MTH00210 572 GPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTLFISGAGIE 616
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-454 |
1.67e-108 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 343.21 E-value: 1.67e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 46 LLLSIVMIFSMNLSI-----HQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHG 120
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 121 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWIT 200
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 201 GSFEFRDLFQIFNNLISNNevnfvfVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 281 LPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 360
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 361 GSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILndSWLYSSIFAIIAW---- 436
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLIL--ELAFGQYYLIFAYwlgc 413
|
410
....*....|....*...
gi 847704 437 STAGLTAFYMCRIYLLTF 454
Cdd:MTH00020 414 FSALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-460 |
2.73e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 294.55 E-value: 2.73e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 20 MLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFsmnLSIHQINSSSVYQyvWSWIINNDFSLEFGYLIDPLTSIMSIL 99
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 100 ITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAF 179
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 180 VTNRVGDFGLLLGILGFYWITGSFEFRDLFqifnnlisnneVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 260 ISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 340 RSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkkSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDE 419
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGLNN--------EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 847704 420 IL---NDSWLYS--SIFAIIAwstAGLTAFYMCRIYLLTFEGHLNV 460
Cdd:MTH00211 389 ILesmNGSYLNAwaLLLTLLA---TSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
5.67e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 288.01 E-value: 5.67e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMnlsihQINSSSVYQYVWSWIINNDFSLEFGYLI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 90 DPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 170 VAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDL------FQIFNNLISNNEVNFV----FVTLcAVLLFAGAIA 239
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGYYGGGAYESplapFAII-GILLLIGCIG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGL 319
Cdd:MTH00032 238 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 320 AYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkKSQNMVLMGGLTKHVPITKNSF 398
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMM 390
|
410 420
....*....|....*....|...
gi 847704 399 LLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 391 LIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
1.09e-83 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 267.26 E-value: 1.09e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 141 SSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 221 VNFVFvtlcaVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPHIMNFISLIG 298
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 299 IITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 847704 376 KKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAG 440
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
10-457 |
2.60e-80 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 268.19 E-value: 2.60e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRR--MWAFqsvlLLSIV-MIFSMNLSIHQINSSsvyqyvWSWIINNDFSLEFG 86
Cdd:MTH00004 10 LLTLLILLTPILLPLLSKNLKNSPTTIKTtvKLAF----LISLIpLTLFLNSGTESITTN------WPWIFTTTFNIPIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 YLIDPLtSIMSI---LITTVGIMVliYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIG 163
Cdd:MTH00004 80 FKLDQY-SLMFLpiaLFVTWSILE--FSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 164 FWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFqifnnliSNNEVNfvfvTLCAVLLFAGAIAKSAQ 243
Cdd:MTH00004 157 WWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF-------SPTQTP----TLPLLGLILAATGKSAQ 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYST 323
Cdd:MTH00004 226 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFST 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 324 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTL 403
Cdd:MTH00004 306 SSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGNL 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 847704 404 SLCGIPPLACFWSKD---EILNDSWLYSSIFAIIAWSTAgLTAFYMCRIYLLTFEGH 457
Cdd:MTH00004 378 ALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-734 |
7.74e-79 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 264.46 E-value: 7.74e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 6 QYAWIIPFLPLpvpmlIGlGLLLFPTATKSLRRMW----AFQSVLLLSIVMIFSMnLSIHQINSSSVYQYVWSWIINNDF 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGprpaAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 82 SLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQifnnLISNNEVNFVFVTLCAVLLFAGAIAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAA----WAATANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 322 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFLLG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT---------QDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 402 TLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIylltfeghlnvhfqnysgkrntpfysislwgk 481
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRV-------------------------------- 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 482 egskisnknFRLVTLLKLKNNGRPSffsnkvykidenvrnmiqPflsiphfgntkiysypyESDNTMLFPILILILFTLF 561
Cdd:PRK07390 434 ---------FRLVFLGKPQQKTRRS------------------P-----------------EVLWPMALPMVILAGFTLH 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 562 VgflgiPFnhdvdILSKWltpsiNLLhknsnnsIDWYEFCKDAVFSVSIAS-FGIFIAFFLY-KPVYSSFQNLdlinsfv 639
Cdd:PRK07390 470 L-----PL-----LLQQW-----GLL-------PSWEALNLWAAPLLVASGlLGVLLGAWIYlNKAWSRPIQL------- 520
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 640 kmgPKRIFSDKIKnaiYDWsynrgYIDAFYETFLTVGMRKLAEFAHFFDRRIIDRIPNGVGLMNFFVAEVIKSVGGGRIS 719
Cdd:PRK07390 521 ---PLRFLQDLLA---YDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVSGQSQ 589
|
730
....*....|....*
gi 847704 720 SYLFFYFSYVSIFLF 734
Cdd:PRK07390 590 FYVLTILLGVALLGA 604
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
2.21e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 261.06 E-value: 2.21e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 44 SVLLLSIVMIFSMNLSIHQINSSsvyqyVWSWIINNDFSLEFGYLIDpltsIMSILITTVGIMV----LIYSDNYMSHDH 119
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 120 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWI 199
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 200 TGSFEFrdlfqifNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 279
Cdd:MTH00208 216 FNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 280 LLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 359
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 360 SGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSSIFAII 434
Cdd:MTH00208 369 SGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALI 440
|
410 420
....*....|....*....|
gi 847704 435 AwstAGLTAFYMCRIYLLTF 454
Cdd:MTH00208 441 A---TLLTAVYSFRIIFFCF 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
8.81e-77 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 253.53 E-value: 8.81e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 11 IPFLPLPVPMLIGLGLLLFPTATKsLRRMWAFQSVLLLSIVMIFSMnlsiHQINSSSVYQYVWSwiinnDFSLEFG--YL 88
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALALL----LQVLAGGPLVYALG-----GWPAPFGivLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTR 168
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 169 PvAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFnnlisnNEVNFVFVTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:COG0651 154 E-ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 249 WLPDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTM 324
Cdd:COG0651 227 WLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 325 SQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSmetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLG 401
Cdd:COG0651 306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIG 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 847704 402 TLSLCGIPPLACFWSKDEILN---DSWLYSSIFAIIAwsTAGLTAFYMCRIY 450
Cdd:COG0651 377 ALALAGLPPLSGFVSKWLLLQaalEAGAWLLAAVLLL--SSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-441 |
1.21e-76 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 262.16 E-value: 1.21e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 60 IHQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLV 139
Cdd:PRK12647 35 IPEIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 140 TSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQiFNNLISNN 219
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 220 EvnfvFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGI 299
Cdd:PRK12647 192 P----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 300 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpk 376
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHETGT------- 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 377 ksQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILN-----DSWlySSIFAIIAWSTAGL 441
Cdd:PRK12647 341 --RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEalleaPLW--SLILTVAAVLGNAL 406
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-449 |
2.93e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 254.45 E-value: 2.93e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 20 MLIGLGLLLFPTaTKSLRRMWAFQ---SV---LLLSIV--MIFsMNLSIHQINSSsvyqyvWSWIINNDFSLEFGYLIDp 91
Cdd:MTH00066 11 MILSLLLLILPL-LLPKSNNFHTNvktSVktaFFISLIplMIF-INQGLESITTS------FHWMNIFNFNINSSFKFD- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 92 ltsIMSILITTVGIMV----LIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFT 167
Cdd:MTH00066 82 ---QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 168 RPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNlisnnevnfvfVTLCAVLLFAGAIAKSAQFPLH 247
Cdd:MTH00066 159 RADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-----------STLPLLGLILAAAGKSAQFGLH 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:MTH00066 228 PWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 328 GYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCG 407
Cdd:MTH00066 308 GLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTG 379
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 847704 408 IPPLACFWSKDEI---LNDSWL--YSSIFAIIAWStagLTAFYMCRI 449
Cdd:MTH00066 380 TPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
22-434 |
1.55e-70 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 238.72 E-value: 1.55e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 22 IGLGLLLFPTATKslRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWiinNDFSLeFGYLIDPLTSIMSILIT 101
Cdd:PRK06525 12 FIGALVVFFLPGR--RAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 102 TVGIMVLIYSDNYMS-------HDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTrPVAAKA 174
Cdd:PRK06525 86 LLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 175 CQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfqifnNLISNNEVNFVFvtlcAVLLFAgAIAKSAQFPLHVWLPDAM 254
Cdd:PRK06525 165 ALKALLITHIGSLGLYLAAATLFLQTGTFALSAL-----SGLHGSLKYLVF----LGILFA-AWGKSAQLPFYSWLPDAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 255 EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLA 333
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 334 LGMGSYRS------ALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVPITKNSFLLGTLSLCG 407
Cdd:PRK06525 315 LSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGTR---------LLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
410 420
....*....|....*....|....*..
gi 847704 408 IPPLACFWSKDEILNDSWLYSSIFAII 434
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
114-449 |
3.29e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 241.27 E-value: 3.29e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 114 YMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLllgI 193
Cdd:MTH00137 111 YMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---I 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 194 LGFYWITGSFEFRDLFQIFnnlISNNEVNfvfVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00137 188 LAMAWMATNLNSWEIQQIF---ALSKDFD---LTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 274 IFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSK 353
Cdd:MTH00137 262 IFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFK 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 354 ALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEI---LNDSWL--YS 428
Cdd:MTH00137 342 AMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWA 413
|
330 340
....*....|....*....|.
gi 847704 429 SIFAIIAWStagLTAFYMCRI 449
Cdd:MTH00137 414 LTLTLIATS---FTAVYSLRV 431
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
27-456 |
8.20e-70 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 244.37 E-value: 8.20e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 27 LLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIM 106
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGVL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 107 VLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGD 186
Cdd:TIGR00940 91 VVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 187 FGLLLGILGFYWITGSFEFRDLFQifnnliSNNEV-NFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:TIGR00940 171 LAMLGGLILLGKITGSFSIDAVIA------SADAIrNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLH 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 266 AATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS------- 338
Cdd:TIGR00940 245 SATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqg 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 339 ---------YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFLLGTLSLCGIP 409
Cdd:TIGR00940 325 ddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 410 PLACFWSKDEILN-------------DSWLYssIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:TIGR00940 396 PFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
73-457 |
1.53e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 239.37 E-value: 1.53e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 73 WSWIINNDFSLEFGYLIDpLTSIMSI---LITTVGIMVliYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYI 149
Cdd:MTH00108 66 WHWMTIQTLKLSLSFKLD-YFSMIFIpvaLFVTWSIME--FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 150 FWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfQIFnnLISNNEVNFVFVTLc 229
Cdd:MTH00108 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQ---QIF--MLNPNNSNLPLMGL- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 230 avlLFAgAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLA 309
Cdd:MTH00108 217 ---LLA-ATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 310 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTK 389
Cdd:MTH00108 293 LTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFK 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 847704 390 HVPITKNSFLLGTLSLCGIPPLACFWSKD---EILNDSwlYSSIFA----IIAWStagLTAFYMCRIYLLTFEGH 457
Cdd:MTH00108 365 TLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTNAWAllitLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
10-457 |
4.66e-69 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 242.14 E-value: 4.66e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIglglllfPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINndFSLEFGYLI 89
Cdd:PRK12645 6 IAILLPFIFALLI-------PFLYKYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPS--LGINFTLYV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 90 DPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTR 168
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYER 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 169 PVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNnLISNNEvnfvFVTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANAD-EIQNSP----LFIPAMILILLGAFTKSAQFPFYI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK12645 232 WLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 329 YMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVP 392
Cdd:PRK12645 312 LIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIMP 382
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 847704 393 ITKNSFLLGTLSLCGIPPLACFWSKDEILN-------------DSWLYssIFAIIAWSTAGLTAFYMCRIYLLTFEGH 457
Cdd:PRK12645 383 ITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
71-448 |
1.06e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 235.20 E-value: 1.06e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 71 YVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 149
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 150 FWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFqifnnlisNNEVNFVFVTLC 229
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 230 AVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLA 309
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 310 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGG 386
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 387 LTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILnDSWLYSSIFAIIA-WSTAG------LTAFYMCR 448
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAAL-EAVLHDGALGPAGpVVLAGivlgsiLTVAYSLR 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-440 |
4.66e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 233.16 E-value: 4.66e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLpvpmligLGLLLFPTATKSLRRM--WAFQSVLLLSIVMIFSMnlsIHQINSSSVYQYVWSWIinNDFSLEFGY 87
Cdd:PRK12648 5 LLVLLPF-------LGALLAALLPRNARNAeaWLAGLVALAALVLLALL---YPAVAAGEVIRAEIEWL--PALGLNLSL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 88 LIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFT 167
Cdd:PRK12648 73 RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 168 RPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIfNNLISNNEVnFVfVTLCAVLLfaGAIAKSAQFPLH 247
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRAHPL-YP-PALVLILL--GAFTKSAQFPFH 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:PRK12648 228 FWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 328 GYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHsmETlvgycpkKSQNMVLMGGLTKHVPITKNSFLLGTLS 404
Cdd:PRK12648 308 GLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAAA 378
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 847704 405 LCGIPPLACFWSK----DEILNDSWLYSSIFAIIAWSTAG 440
Cdd:PRK12648 379 MAGVPLLNGFLSKemffAETLDTHLLGSLDWLLPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
3.41e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 228.56 E-value: 3.41e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 83 LEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 163 GFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQifNNLISNNEVNFVFVTLCAVLLFAGAIAKSA 242
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 323 TMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITK 395
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT---------RDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 847704 396 NSFLLGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
75-459 |
2.43e-59 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 215.00 E-value: 2.43e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 75 WIINNDFSLEFgyLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWEL 153
Cdd:PRK12646 64 WMKTLDINLDL--RLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 154 VGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLisNNEVNFVFVTLCAVLl 233
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 234 faGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQK 313
Cdd:PRK12646 219 --GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQW 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 314 DIKRGLAYSTMSQLGYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpk 376
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEAGT------- 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 377 ksQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKD----------EILNDSWLYSSIFAIIAWSTAGLTAFYM 446
Cdd:PRK12646 370 --RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYA 447
|
410
....*....|...
gi 847704 447 CRIYLLTFEGHLN 459
Cdd:PRK12646 448 LYMVKEVFWGKYD 460
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
42-488 |
4.86e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 206.92 E-value: 4.86e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 42 FQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGY 121
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 122 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIgFWFTRPVAAKACQKAFVTNRVGDFGLLLGIlGFYWITG 201
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 202 SFEFrdlfQIFNNLISNNEVNFVFVtlcaVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 281
Cdd:MTH00165 163 SWNF----IFYLDFMKNSFEMLLIG----LLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 282 PLFIvIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 361
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 362 SVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKD---EILNDSWLYSSIFAIIAWST 438
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 847704 439 aGLTAFYMCRIYLltfeghlnvhfqnYSGKRNTPFYSISLWGKEGSKISN 488
Cdd:MTH00165 386 -GLTVSYSFRLIY-------------YSMSGDFNLKSLNNLSDESKFMLK 421
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-459 |
2.37e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 199.49 E-value: 2.37e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 45 VLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 125 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAkACQKAFVTNRVGDFGLLLGILGFYwitgsfe 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 205 frdLFQIFNNLISNNEVNFVFVTLCAVLLfaGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 284
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 285 IVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 365 HSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILnDSWLYSS---IFAIIAWSTAGL 441
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESNmpiMTLILMFLSTSL 383
|
410
....*....|....*...
gi 847704 442 TAFYMCRIYLLTFEGHLN 459
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNS 401
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
1.32e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 197.37 E-value: 1.32e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 44 SVLLLSIVMIFSMNLSIHQINSSSvyqYVWSWIINNDFSLEFGY--LIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 122 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWftrpVAAKACQKAFVT---NRVGDFGLLLGILGFYw 198
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY----QNKKSLSAGMLTaltNRIGDVLILLSIALLV- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 199 ITGSFefrdlfqifnNLISNNEVNFVFvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Cdd:MTH00151 160 LLGHW----------SILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 279 RLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 358
Cdd:MTH00151 228 RFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 359 GSGSVIHSMETlvgycpkkSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSSIFAIIA 435
Cdd:MTH00151 308 CAGSIIHSSSG--------TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMF 379
|
410 420 430
....*....|....*....|....*....|....*....
gi 847704 436 WSTaGLTAFYMCRIYLLTFEGHLNVHFqnYSGKRNTPFY 474
Cdd:MTH00151 380 VGV-GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
26-451 |
2.18e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 196.91 E-value: 2.18e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 26 LLLFPTATKSLRRMWAFqsvlllsIVMIFSMNLSIHQINSSSVYQyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGI 105
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 106 MVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIgFWFTRPVAAKACQKAFVTNRVG 185
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 186 DFGLLLGIlgfYWiTGSFEFRDLFQIFNNLISNnevnfvFVTLCAVLlfaGAIAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:MTH00207 151 DVMLLLSI---GW-TLNQGHWSITNMWQTDMNN------YIALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVH 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 266 AATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFH 345
Cdd:MTH00207 218 SSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFH 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 346 LITHAYSKALLFLGSGSVIHSMEtlvgycpkKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSW 425
Cdd:MTH00207 298 LITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSL 369
|
410 420
....*....|....*....|....*...
gi 847704 426 LY--SSIFAIIAWSTAGLTAFYMCRIYL 451
Cdd:MTH00207 370 FYphNSLMILMIFLATALTAAYSTRFTL 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-459 |
7.18e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 193.37 E-value: 7.18e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 18 VPMLIGLGLLLFPTATKSLRRMWAFQS---VLLLSIVMIFSMNlsihqiNSSSVYQYV--WSWIinNDFSLEFGYLIDPL 92
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFD------PGTGGFQFVesYPWI--PSLGISYHLGVDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 93 TSIMSILITTVGIMVLIYSDNYMSHDHGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFW--FTRPV 170
Cdd:COG1008 84 SLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 171 AAKacqKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFQIFNNLISNNEVNFVFVtlcavLLFAGAIAKSAQFPLHVWL 250
Cdd:COG1008 162 AAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 251 PDA-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----HIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTM 324
Cdd:COG1008 233 PDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 325 SQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVPITKNSFLLG 401
Cdd:COG1008 309 SHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRTHTR---------DIADLGGLAKRMPVLAALFLLA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 847704 402 TLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLN 459
Cdd:COG1008 380 ALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-449 |
1.84e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 186.62 E-value: 1.84e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTaTKSLRRMWAFqSVLLLSIVMIFSMnlsIHQINSSSVYQYV---WSWIInndfSLEFG 86
Cdd:PRK08375 4 HLLPLLVAVPLLAAALIVLLPK-RRRLRWALAL-LVAALTFALAISL---LPQVLDGGVIAYVvggWPPGI----GIELR 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 ylIDPLTSIMSILITTVGIMVLIYSdnYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWF 166
Cdd:PRK08375 75 --ADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 167 TRpVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNnlisnnEVNFVFVTLcAVLLFAGAIaKSAQFPL 246
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 322 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVihsmetlvgYCPKKSQNMVLMGGLTKHVPITKNSF 398
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAF 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 847704 399 LLGTLSLCGIPPLACFWSKDEIL---NDSWLYSSIFAIIAWSTagLTAFYMCRI 449
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-421 |
1.61e-49 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 187.56 E-value: 1.61e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 16 LPVPMLIGLGLLLFPTATKSLRRM--WAFQSVLLLSIVMIFSmnlSIHQINSSSVYQYVWSWI---INNDFSLEFGYLID 90
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKagWPLAAIFVAAAGLLLK---ELPPILDGDALTWSVTWIpdlLGNGVDVNLALRAD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 91 PLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFwfTRPV 170
Cdd:PRK12650 79 ALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 171 AAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfqIFNNLISNNEVnfvFVTLCAVLLFAGAIAKSAQFPLHVWL 250
Cdd:PRK12650 157 GEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI--LHSDVWAEKPG---LTTVVAVLIAVAAFTKSAQFPFHFWL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 251 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLF--IVIPHIMNFIslIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK12650 232 PEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVWNWLLII--VGMITALMGAVFAVQKTDLKKLTAYSTVSQLG 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 329 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFLLGTLSL 405
Cdd:PRK12650 310 WIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQAGT---------RDIRRLGSLWRRMPFTFVSVTIAALSM 380
|
410
....*....|....*.
gi 847704 406 CGIPPLACFWSKDEIL 421
Cdd:PRK12650 381 AAVPPLFGFVSKEGML 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-456 |
1.82e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 181.83 E-value: 1.82e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTR 168
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 169 PVAAKACQKAFVTNRVGDFGLLLGILGFYwitGSFEFRDLFQIFNNLISNnevNFVFVTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSEN---PTVVAKIALALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 249 WLPDAM-EGPTPISALIHAATmvAAGIFLVARLLpLFIVIPHIMN-----FISLIGIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARVL-FSIYGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 323 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGL 387
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGGL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 388 TKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-456 |
6.72e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 177.47 E-value: 6.72e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 YLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWF 166
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 167 TRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVNFvFVTLCAVLLFAGAIA------K 240
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGL-AGNPPLALGVALALAlwaftiK 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 241 SAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIVIPHIMNFISLIGIITVFLGATLALA 311
Cdd:PRK12667 237 AAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 312 QKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpkKSQNMVLMGGLT 388
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLG 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 389 KHVPITKNSFLLGTLSLCGIPPLACFWSKdEILNDSWLYSS--IFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK12667 387 RKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESGfyLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-417 |
6.71e-42 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 159.13 E-value: 6.71e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRR---MWAFQSVLLLSIVMIFsmnlsihqinsssvyqyvwsWIINNDFSLEFG 86
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRSRrllAGLALLGLLLALALLL--------------------LALGGGTGTAFG 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 --YLIDPLTSIMSILITTVGIMVLIYSDNYMShDHGYLRF-FAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGICSYLLI 162
Cdd:COG1007 64 gmFVVDGFALFFKLLILLAALLVLLLSRDYLE-RRGLLRGeFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 163 GFWFTRPVAAKACQKAFVTnrvGDFG---LLLGILGFYWITGSFEFRDLFQIfnnlISNNEVNFVFVTLCAVLLFAGAIA 239
Cdd:COG1007 143 AFRRDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLLGLVLVLAGLAF 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIK 316
Cdd:COG1007 216 KLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVK 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 317 RGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsVIhsmeTLVGYCPKKSQNMVLMGGLTKHVPI 393
Cdd:COG1007 295 RMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPL 366
|
410 420
....*....|....*....|....
gi 847704 394 TKNSFLLGTLSLCGIPPLACFWSK 417
Cdd:COG1007 367 LALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
2.47e-41 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 158.71 E-value: 2.47e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSvyqyvwSWIINndfslefgyli 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV----------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 90 DPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 170 VAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNnevnfVFVTLCAVLLFAGAIAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGAS-----PSLQAAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 250 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 847704 330 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
7.29e-39 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 153.51 E-value: 7.29e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGY----LRFFayMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 165 WFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfqifnnlISNNEVNFVFVTLCAVLLFAGAIAKSAQF 244
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVAR----LLPL------FIVIphimnfisLIGIITVFLGATLALAQK 313
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvfdLLGApgwwwgVLVL--------ALGAISAVLGVLYALAEH 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 314 DIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQ 379
Cdd:PRK06521 299 DLKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------R 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 380 NMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKdeilndsWL-YSSIF------------------AIIAWsTAG 440
Cdd:PRK06521 370 DMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSE-------WLlLQSLLsspglpqwglklavpiaaAMLAL-TAA 441
|
410
....*....|....*.
gi 847704 441 LTAFYMCRIYLLTFEG 456
Cdd:PRK06521 442 LAAMCFVKFYGITFLG 457
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-417 |
7.38e-39 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 150.36 E-value: 7.38e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRmWAFQSVLLLSIVMIFsmnlsihqinsssvyqyVWSWIINNDFSLEFG--Y 87
Cdd:PRK05777 8 LILLLPELILLGAAVVLLLIDAFVRRHSR-RATLAVLALLLALVA-----------------LLFVLGAAGGGTAFGgmL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 88 LIDPLTSIMSILITTVGIMVLIYSDNYMShDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFT 167
Cdd:PRK05777 70 VVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 168 RPVAAKACQKAFVtnrVGDFG---LLLGILGFYWITGSFEFRDLFQIFNNLISNNevnfVFVTLCAVLLFAGAIAKSAQF 244
Cdd:PRK05777 149 RRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKLSAV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 245 PLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK05777 222 PFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 322 STMSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSVIHSMETLVGYCPKKSQnmvlMGGLTKHVPITKNSF 398
Cdd:PRK05777 301 SSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVM 372
|
410
....*....|....*....
gi 847704 399 LLGTLSLCGIPPLACFWSK 417
Cdd:PRK05777 373 TIFMLSLAGIPPTAGFWGK 391
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
74-417 |
2.89e-38 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 150.92 E-value: 2.89e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 74 SWIINNDFSLEFGYLIdpLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 153
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 154 VGICSYLLIGFWFTRpvAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVNFVFVtlcavLL 233
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFL-----FL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 234 FAGAIAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---LFIVIPHIMN------FISLIGIIT 301
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtkLFSEFGTYRGvplfnyILAWLGNIS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkks 378
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT--------- 353
|
330 340 350
....*....|....*....|....*....|....*....
gi 847704 379 QNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-459 |
2.50e-37 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 146.50 E-value: 2.50e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 11 IPFLPLP--VPMLIGLGLLLFPTATKSLRRMWAFQS---VLLLSIVMIFSMNlsihqiNSSSVYQYVW--SWIINNDFSL 83
Cdd:PRK05846 3 WPLLSLLifLPLIGGLLVLLTERFGARLARWIALIGtllTLLLSLVLWIGFD------SSNAGFQFVEkhPWIPRFGISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 84 EFGylIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIG 163
Cdd:PRK05846 77 HLG--VDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 164 FW--FTRPVAAkacQKAFVTNRVGDFGLLLGILGFYWI----TGSFEFRDLFQifnNLISNNEVNFVFVTLcavlLFAGA 237
Cdd:PRK05846 153 VWggKNRIYAA---TKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLN---LPLPPGVQYWLFLAF----FIAFA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 238 IaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIPHIMN-FISLIGIITVFLGATLALAQKDI 315
Cdd:PRK05846 223 V-KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFApIIITLGVIAIIYGALVALAQTDI 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 316 KRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVP 392
Cdd:PRK05846 302 KKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRLHTR---------DIADYGGLAKVMP 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 847704 393 ITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLN 459
Cdd:PRK05846 373 VLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
8.27e-36 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 144.10 E-value: 8.27e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 20 MLIGLGLLLFPTATKSL---RRMWAFQSVL-LLSIVMIFSMNLSIHQINSSSVYQYVWSWIINNDFSLEfgylIDPLTSI 95
Cdd:PRK08667 6 FLGAILLLLAAAVIPLVfrhKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 96 MSILITTVGIMVLIYSDNYMSHDHGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAA 172
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 173 KACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfqifnnliSNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPD 252
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 253 AMEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPHIM--NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 330 MMLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITK 395
Cdd:PRK08667 309 ILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYTS 379
|
410 420
....*....|....*....|..
gi 847704 396 NSFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-421 |
2.89e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 137.26 E-value: 2.89e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATKslrRMWAFQSVLLLSIVMIFSMNLSIhqINSSSVYQYVWSWIINNDFSLEFGYLI 89
Cdd:PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATK---KDSFIRNFLLITISIFFFGNILL--IDLLFLKGIRAQFELMDFGNYSIGLHL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 90 DPLTSIMSILITTVGIMVLIYSDNYMSHDHGYL--RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFT 167
Cdd:PRK06589 82 EPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 168 RPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDlfqifNNLISNNEVNFVFvtlcavLLFAGAIAKSAQFPLH 247
Cdd:PRK06589 162 NISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------LMFIYGIAKTAIFPVH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIM------NFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK06589 231 SWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQrifaefNWLIFIPIVSIFYSSLKALKTDNIKKILAY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 322 STMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSVihsmetlvgYCPKKSQNMVLMGGLTKHVPITKNSF 398
Cdd:PRK06589 311 STISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFII 381
|
410 420
....*....|....*....|...
gi 847704 399 LLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK06589 382 SISSLSLIGIPIFSGFISKFLIL 404
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
18-465 |
1.32e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 135.07 E-value: 1.32e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 18 VPMLIGLGLLLFPTATKSLRRMWAFQS---VLLLSIVMIFSMNLSIHQinsssvYQYVWSWIINNDFSLEFGYLIDPLTS 94
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPTGSG------FQFTEDIPWIPALGISYHLGVDGISL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 95 IMSILITTVGIMVLIYSDNYMSHDHGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWfTRPVAAKA 174
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 175 CQKAFVTNRVGDFGLLLGILGFYWITGsfefrDLFQIfnNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAM 254
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL--LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 255 -EGPTPISALIHAATMVAAGIFLVARLLPLFiviPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:TIGR01972 231 vEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PDASLyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 330 MMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFLLGTLSLC 406
Cdd:TIGR01972 308 VLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVLYERAHT---------RDIAKYGGLANKMPVLAAFFMLFAMASL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 407 GIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNY 465
Cdd:TIGR01972 379 GLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-416 |
4.67e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 133.52 E-value: 4.67e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPtatksLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSsvyqyvwswiinNDFSLEFGYLI 89
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAG------------EIFAAGLWFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 90 DPLTSIMSILITTVGIMVLIYSDNYMSH--DHG-----YLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGICSYLL 161
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHevEHGelspvTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 162 IGFWFTRpVAAKACQKAFVTNRVG-DFGLLLGILGFYWITGSFEFRDLFQIFNNLIS-NNEVNFVFVTLCAVLLFAGAIA 239
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLKhASLLDPTLMKLAFVFLLIGFGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 240 KSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLLPLFIVIphimnfisliGIITVFLGA 306
Cdd:PRK06458 227 KVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLLSVLVAA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 307 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSmetlvgycpKKSQNMVL 383
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQK---------YGTRDINV 367
|
410 420 430
....*....|....*....|....*....|...
gi 847704 384 MGGLTKHVPITKNSFLLGTLSLCGIPPLACFWS 416
Cdd:PRK06458 368 IRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-421 |
3.79e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 130.46 E-value: 3.79e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 19 PMLIGLGLLLFPTATKSLRRMWAFQSvLLLSIVMIFSMnlsihqinsssvYQYVWSWIINNDFSLefgyLIDPLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVS-AVYALGLVASM------------VPLELTLLDNFGVTL----RADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 99 LITTVGIMVLIYSdnymsHDHGYLRFFAymsFFSTSMLGLV----TSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKA 174
Cdd:PRK07234 75 TNALVTLAVIFYC-----WESAKTRFFY---AQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 175 CQKAFVTNRVGDFgLLLGILGFYWITGSFEFRDLFQIFNNLISnnevnfvfvtlcavLLFAGAIAKSAQFPLHVWLPDAM 254
Cdd:PRK07234 147 LRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATADPEAFA--------------LIALGLLVKGGIFVSGLWLPLTH 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 255 EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHImnfISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 334
Cdd:PRK07234 212 SEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAP 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 335 GMGsyrsALFHLiTHAYSKALLFLGSGsvihsmeTLVGYCPKKSQNMvlMGGLTKHVPITknsflLGTLSLCGIPPLACF 414
Cdd:PRK07234 289 LVG----GLYAL-AHGLVKSTLFLCAG-------ALPSRNFTELISQ--MLGIGKWIPLT-----MASFSIAGFPLLAGF 349
|
....*..
gi 847704 415 WSKDEIL 421
Cdd:PRK07234 350 VSKVLTL 356
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-367 |
9.65e-32 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 130.42 E-value: 9.65e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 81 FSLEFGYLIDPLtsIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYL 160
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 161 LIGFWFTRPVAAKACQKAFvTNRVGDFGLLLGILGFYWITGSFEfrdLFQIFNNLISnnevnfvfvtlcaVLLFAGAIAK 240
Cdd:MTH00095 115 LVLFYNNWDSNSGAMNTAL-TNRIGDFFIFLFFSGFIFSSYYFF---SFSFFSSSMI-------------LMLLLTSFTK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIpHIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:MTH00095 178 SAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 847704 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSM 367
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN 303
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
89-421 |
1.83e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 129.12 E-value: 1.83e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYSDNYMSHD--HGYLRFFAYMSFFSTsmlGLVTSSNLIQIYIFWELVGICSYLLIGFWF 166
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 167 TRPvAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNlisnneVNFVFVTLCAVLLFAGAIAKSAQFPL 246
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIPHIMNFISLI---GIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 323 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpkKSQNMVLMGGLTKHVPITKNSFL 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340
....*....|....*....|..
gi 847704 400 LGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
2.98e-29 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 122.45 E-value: 2.98e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGICSYLLIG--- 163
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 164 FWFTRPVAAKACQKAFVtnrVGDFGLLLGILGFYWITGSFefrdlfQIFNNLISNNEVNFVFV--TLCAVLLFAGAIAKS 241
Cdd:PRK08601 148 GWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGEW------QLTSVLSNENLAQLGTWekTGINLLLILAVMIPA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPHIMNFIslIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK08601 219 AQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLV 295
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 847704 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGL 387
Cdd:PRK08601 296 GSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
57-449 |
5.49e-29 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 121.21 E-value: 5.49e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 57 NLSIHQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDH-GYLRFFAYMSFFSTSM 135
Cdd:TIGR01770 36 NLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGI 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 136 LGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNl 215
Cdd:TIGR01770 116 FLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN- 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 216 ISNNEVNFVFvtlcAVLLFAGAIA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPHIMN 292
Cdd:TIGR01770 195 GMLNISLLLL----GIVLILVGLLfKLSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQI 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 293 FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSVIHSMET 369
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 370 lvgYCPKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEI----LNDSWLYSSIFAIIawsTAGLTAFY 445
Cdd:TIGR01770 347 ---YKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVffalLKSGLYWLAVIAVL---TSVIGAFY 420
|
....
gi 847704 446 MCRI 449
Cdd:TIGR01770 421 YLRV 424
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-417 |
5.26e-28 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 119.61 E-value: 5.26e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 10 IIPFLPLPVPMLIGLGLLLFPTATksLRRMWAFqSVLLLSIVMIFSMNLSIHqinssSVYQYVwswiinnDFSLEFgYLI 89
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFLPGR--ARKALLL-LAPVLAVLAVLTVPEGTY-----LTVTFL-------GFDLVL-GRV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 90 DPLTSIMSILITTVGIMVLIYSdnymSHDHGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGICSYLLIgfWFTR- 168
Cdd:PRK12668 66 DKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARGt 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 169 PVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFQIFNnlisnnevnfvfvTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLHA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIphimnfISLIGIITVFlGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRRLLSYHIVSQVG 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 329 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFLLGTLSL 405
Cdd:PRK12668 278 YMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGT---------EKLTELGGLYRSMPLTALFCLVGALSI 348
|
410
....*....|..
gi 847704 406 CGIPPLACFWSK 417
Cdd:PRK12668 349 SAFPLFSGFVSK 360
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-456 |
4.60e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 115.82 E-value: 4.60e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 14 LPLPVPMLIGLGLLLFPTATKSLRrmwaFQSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWiiNNDFSLEFgyLIDPLT 93
Cdd:PRK07691 8 LPILIPVITAILLIFLGKRPIIQR----YVALIGSLLTLVAAIILVANVYKHGIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 94 SIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRpVAAK 173
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVnfvFVTLCAVLLFAGAIAKSAQFPLHVWLPDA 253
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 254 MEGP-TPISALIhAATMVAAGIFLVARLLPLFIviPHIMNF----ISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFF--SHDTSFthylILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 329 YMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHsmetLVGYCPKKSqnmvlMGGLTKHVPITKNSFLLGTLSL 405
Cdd:PRK07691 313 VILVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 847704 406 CGIPPLACFWSKDEILNDSWLYSS-IFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK07691 384 AGIPPLSGFYGKFFIVEGTFEAGFyVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
11-454 |
3.74e-25 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 110.04 E-value: 3.74e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 11 IPFLPLPVPMLIGLGLLLFPTATKsLRRMWAFQSVLLLSIVmifSMNLSIHQINSSSVYQYVWSWiinndfSLEFG--YL 88
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLI---SLALLIYVQRHGPITLDFGGW------LPPFGiqFT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTR 168
Cdd:PRK12663 75 GDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQER 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 169 pVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVnfvfVTLCAVLLFAGAIaKSAQFPLHv 248
Cdd:PRK12663 155 -EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM- 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 249 WLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPHIMNF-ISLIGIITVFLGATLALAQKDIKRGLAYSTMS 325
Cdd:PRK12663 228 WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHPlLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 326 QLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSVIHsmetLVGYcpkksQNMVLMGGLTKHVPITKNSFLLGT 402
Cdd:PRK12663 307 SIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGY-----RSLQYLGGLYRKEPLFGALFLILI 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 847704 403 LSLCGIPPLACFWSKDEILNDS------WLYSSIFAiiawsTAGLTAFYMCRIYLLTF 454
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVQGAldngayILLALMLI-----TSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-364 |
8.79e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 105.73 E-value: 8.79e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 44 SVLLLSIVMIFSMNLSIHQINSSSVYqyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 124 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLgILGFYWITGSF 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 204 EFrdlfqifnnlisnnevnfvfvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 283
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 284 FIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSV 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 847704 364 I 364
Cdd:MTH00063 293 M 293
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-449 |
3.68e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 100.58 E-value: 3.68e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 11 IPFLPLPVPMLIGLGLLLfptaTKSLRRMWAFqSVLLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINNDFSLEfgylID 90
Cdd:PRK12662 5 LPILQVIIPLLSAVVCAL----LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 91 PLTSIMSILITTVGIMVLIYSdNYMSHD----HGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWF 166
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYG-IYPNRKeisvNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 167 TRpvaaKACQKAF---VTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVNfvfvtLCAVLLFAGAIAKSAQ 243
Cdd:PRK12662 155 DK----KALVAAFeylIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAAL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 244 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIK 316
Cdd:PRK12662 226 FPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 317 RGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVPI 393
Cdd:PRK12662 305 RIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPK 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 394 TKNSFLLGTLSLCGIPPLACFWSKDEILN---DSWLYSSIFAIIAWStaGLTAFYMCRI 449
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-465 |
1.64e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 92.47 E-value: 1.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 16 LPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLL--SIVMIFSMNLSihqiNSSSVYQYVWSWIINNDFSLEFGylIDPLt 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAVLVLawSLFLLTQFDLS----DPGMQFQEYLPWNEPLGLSYSLG--VDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 94 SIMSILITTVGIMVLIYSDNYMSHDHGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPvAAK 173
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfqiFNNLISNNEVNFVFVTLCAVLLFAGAIaKSAQFPLHVWLPDA 253
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFD-----YDAISTQNLSLNTQLILLTGLLLGFGI-KIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 254 MEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPHIMNFIS----LIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 329 YMMLALGMGSYRS---ALFHLITHAYSKALLFlgsgsvihsmeTLVGYCPKK--SQNMVLMGGLTKHV---PITKNSFLL 400
Cdd:PRK07363 309 YILVAAAAGTQLSllgAVAQMISHGLILALLF-----------HLVGIVERKvgTRDLDVLNGLMNPIrglPLTSALLVL 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 847704 401 GTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNY 465
Cdd:PRK07363 378 AGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
127-478 |
3.56e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 91.22 E-value: 3.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 127 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGICSYLLIGFwftrpvaakaCQKAFVTNRVGDFGLLLG-----IL--GF 196
Cdd:CHL00049 113 FLLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYLLMGgasssILvyGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 197 YWITG-SFEFRDLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGI 274
Cdd:CHL00049 183 SWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAAS 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 275 FLVARLLPlfIVIPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 350
Cdd:CHL00049 262 ALATRIFD--IPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYM 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 351 YSKALLFLGSGSVIHSMETLVGycpkkSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSW---LY 427
Cdd:CHL00049 340 LFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWqagLY 414
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 847704 428 SSIFaiIAWSTAGLTAFYMCRIYLLTFEGH---LNVHFQNYSGKRNTPFYSISL 478
Cdd:CHL00049 415 FLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-454 |
3.66e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.57 E-value: 3.66e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 227 TLCAVLLFAGAIaKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPHIMNFISLIGIITVFLG 305
Cdd:PRK12665 210 ALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVihsmETLVGycpkkSQNMV 382
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 383 LMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEIL-----NDSWLyssIFAIIAWS--TAGLTAFYMCRIYLLTF 454
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeagaeDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
46-464 |
4.44e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 87.83 E-value: 4.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 46 LLLSIVMIFSMNLSIHQINSSSVYqyvwSWIINNDFSLEFGylIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYlrfF 125
Cdd:PRK06473 40 LLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGLSLPLLVLNSLLTLIAIYSSDESIQRPRFY---Y 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 126 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWfTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEF 205
Cdd:PRK06473 111 SLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 206 RdlfqiFNNLISNNEVNFVFVTLCAVLLFAGAIaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-LPL 283
Cdd:PRK06473 190 D-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 284 FI-VIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLg 359
Cdd:PRK06473 263 FPeAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFL- 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 360 sgsvihsmetLVGYCPKK--SQNMVLMGGL---TKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAII 434
Cdd:PRK06473 342 ----------LVGVVYKKtgSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLL 411
|
410 420 430
....*....|....*....|....*....|
gi 847704 435 AWSTAGLTAFYMCRIYLLTFEGHLNVHFQN 464
Cdd:PRK06473 412 CMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
3.75e-17 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 85.08 E-value: 3.75e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 YLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGICSyllIGFWF 166
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 167 TRPV--AAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfqifNNLISNNEVNFVFVTLCAVLLFaGAIAKSAQF 244
Cdd:PRK06277 142 ASGTeeAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGLP 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 245 PLHVWLPDAMEGPTP-ISALIHAAT-MVAAGIFLVarLLPLFIVIPHIMNF---ISLIGIITVFLGATLALAQKDIKRGL 319
Cdd:PRK06277 217 PFHTIKSDIYAKAKPfGSALLQTFSkFVLVALMLV--IFKLFGGLSYFPSAqgvLIALSVLAMVFGVVMALLQTDYKRLL 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 320 AYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGsvihsmetLVGYCpKKSQNMVLMGGLTKHVPITKN 396
Cdd:PRK06277 295 AYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAG--------IVSYR-TKTSNLRKLGGLLPVMPVVAF 365
|
330 340
....*....|....*....|.
gi 847704 397 SFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 366 MVLCAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
43-421 |
8.16e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 83.91 E-value: 8.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 43 QSVLLLSIVMIFSMNLsIHQINSSSVYQYVWSWIINNDFSLEFGYLIdpltsIMSILITTVGIMVLIYSDNYMSHDHGYL 122
Cdd:MTH00199 24 LSTLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 123 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGS 202
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 203 FEFRDlfqifNNLISNNEVNFVFVTLCavLLFagaiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarll 281
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 282 PLFIVIPHIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFL 358
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSI 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 847704 359 GSGSVIHSMETLVGYcpkksqnMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 314 CSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-414 |
1.51e-16 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 83.72 E-value: 1.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 89 IDPLTSIMSILITTVGIMVLIYsdNYMSHDHGYLRFF-AYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGfwft 167
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLF--NIDWHRHAQVKANgLLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG---- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 168 rpvAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVNFVFVTlcAVLLFAGAIaksaqfPLH 247
Cdd:PRK08042 132 ---NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII------PLH 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 248 VWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIphimnFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK08042 201 GWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV-----ALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 322 STMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIHSmetlVGYcpkksQNMVLMGGL 387
Cdd:PRK08042 276 HTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGI 346
|
330 340
....*....|....*....|....*..
gi 847704 388 TKHVPITKNSFLLGTLSLCGIPPLACF 414
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGF 373
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
124-448 |
2.72e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 82.39 E-value: 2.72e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 124 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFW--FTRPVAAkacQKAFVTNRVGDFGLLLGILGFYWITG 201
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAA---TKFILYTALASIFILVAGLALALSGD 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 202 SFEFrDLFQIfnnliSNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV--- 277
Cdd:PRK12561 166 TFTF-DLAEL-----GAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmgg 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 278 ---------------ARLLPLFIVIphimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS- 341
Cdd:PRK12561 233 yalirfnvqmlpdahVYFAPALAIL----------GVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDl 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 342 ----ALFHLITHAYSKALLFLGSGSVIHSMETLVgycpkksqnMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK12561 301 gisgAMLQMISHGLIAAALFFLTGVTYERTHTLS---------IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSE 371
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 847704 418 DEI---LNDSWLYSSIFAIIAWSTAG----LTAFY---MCR 448
Cdd:PRK12561 372 LTVflgITSSDVYSSTFRTITILLAAvgliLTPIYllsMLR 412
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-434 |
3.08e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 81.23 E-value: 3.08e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 134 SMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRdlfqiFN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 214 NLISNNEVNF--VFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPHI 290
Cdd:MTH00196 80 NLVLNSGQSFssVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 291 MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsvihsm 367
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 847704 368 eTLVGYCPKKSQnMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAII 434
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFL 287
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-446 |
3.10e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 82.11 E-value: 3.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 16 LPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIHQINSSSVYqyvwswiinndfslefgYLIDPLtSI 95
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 96 MSILITTVG-IMVLIYSDNYMSH-------DHGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWELVGICSYLLI 162
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAELTTVFSAMLI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 163 GFWFTRPVAAKACQKAFVTNRVGDFGLLlGILGFYWIT------GSFEFRDLFQIFNNLISNnevnfvFVTLCAVLLFAG 236
Cdd:PRK08676 143 AILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTELAAHASLLSPS------VLGASFLFIFIG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 237 AIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPHIMNFISLIGIITVFLGATLALAQ 312
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAFSMLSQ 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 313 KDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsVIHSMetlvgycpKKSQNMVLMGGLTK 389
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDRFDRIFDVFR 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 847704 390 HVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDS-----WLYSSIFAIIAWSTAGLTAFYM 446
Cdd:PRK08676 366 LQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
127-417 |
5.45e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.17 E-value: 5.45e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 127 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSF 203
Cdd:PRK02504 112 FAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 204 EfrDLFQIFNNLISNNEVNFVfvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLL- 281
Cdd:PRK02504 192 T--QLSAIALALITSPSLGLA---LALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLv 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 282 ---PLFIVIPHIMnfISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayskal 355
Cdd:PRK02504 266 tafPSFDEQWKLL--FTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------ 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 847704 356 LFLGSGS----VIHSMETlvgycpkKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSK 417
Cdd:PRK02504 338 LFMNLGAfacvILFSLRT-------GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
3.09e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 67.45 E-value: 3.09e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 847704 75 WIINNDFSLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-445 |
8.22e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 68.34 E-value: 8.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 9 WIIpfLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIfsMNLSIHQINSSSVYQYvwswiinNDFSLEFG-- 86
Cdd:PRK12666 7 LII--LPILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAVAV--ALLASAAAGGIGVYLL-------GNWPAPFGiv 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 YLIDPLTSIMSILITTVGIMVLIYSdnyMSHDHGYLRFF-AYMSFFstsMLGL----VTSsNLIQIYIFWELVGICSY-- 159
Cdd:PRK12666 76 LVLDRLSALMLLLTALLALAALLYA---LAGWDRAGPHFhALFQFQ---LMGLngafLTG-DLFNLFVFFEVLLAASYgl 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 160 LLIGFWFTRpvaAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNEVnfVFVTLCAVLLFAGAIa 239
Cdd:PRK12666 149 LLHGSGRAR---VRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRA--LLEAGAALLLVVFLI- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 240 KSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF--------------IVIPhimnfislIGIITVFL 304
Cdd:PRK12666 223 KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagfgqdWLLP--------GGLATLAF 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 305 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL----------GSGSVIHSMETLV 371
Cdd:PRK12666 293 GAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgAAADRLAVTPELY 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 372 GYCPKksQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILN---------DSWLY------SSIFAIIAW 436
Cdd:PRK12666 373 DLDEE--EEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLAALIAL 450
|
....*....
gi 847704 437 STAGLTAFY 445
Cdd:PRK12666 451 TRAGIRLFW 459
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-411 |
1.62e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 64.43 E-value: 1.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 94 SIMSILITTVGIMVLIYSDNYmSHDHGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWftrpvaAK 173
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 174 ACQKAFVTNRVGDFGLLLGILGFYW---ITGSFEFrdlfqifnnlisnnevNFVFVTLCAVLLFAGAIAKSAQFPLHV-- 248
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP--HIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 327 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSVihSMETLvGYCPKKSQNMVLMGGltkhvpi 393
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGL------- 331
|
330
....*....|....*...
gi 847704 394 tknsfLLGTLSLCGIPPL 411
Cdd:PRK06459 332 -----TLLASSLSGLLPN 344
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-409 |
4.92e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 62.39 E-value: 4.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 74 SWIINNDFSLEFGYLIDPL--TSIMSILITTVGIMVLIYSdNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFW 151
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVdgVSLFFILLTTLLIPICILI-SWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILF 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 152 ELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSfefRDLFQIFNNLISNNEVNFVFVTlcav 231
Cdd:MTH00204 142 EGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVG---- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 232 lLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMN-FISLIGIITVFLGATLA 309
Cdd:MTH00204 215 -FFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTT 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 310 LAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSVIHSMET-LVGYcpkksqnmvlMG 385
Cdd:MTH00204 294 CRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTrLIKY----------YR 363
|
330 340
....*....|....*....|....
gi 847704 386 GLTKHVPITKNSFLLGTLSLCGIP 409
Cdd:MTH00204 364 GLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-393 |
6.54e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 62.42 E-value: 6.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 148 YIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGI-LGFYWITGSFEFRDLfqifnnliSNNEVNFVFV 226
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL--------AAKDFGLGFQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 227 TLC-AVLLFAGAIaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV------------------ARLLPLFIVI 287
Cdd:PRK02546 213 LLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnagmlpdahAQFAPLLIVL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 288 phimnfisliGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLgsgs 362
Cdd:PRK02546 286 ----------GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF---- 349
|
250 260 270
....*....|....*....|....*....|...
gi 847704 363 vihsmetLVGYCPKKSQNMVL--MGGLTKHVPI 393
Cdd:PRK02546 350 -------LVGATYDRTHTLMLdeMGGVGQKMRK 375
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
143-445 |
1.05e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 61.48 E-value: 1.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 143 NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIfNNLISNNEVN 222
Cdd:MTH00226 152 DIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 223 FVFVTlcavlLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPHIMNFISLIGII 300
Cdd:MTH00226 231 WIFLG-----IFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIV 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 301 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLgsgsvihsMETLVgYCPKK 377
Cdd:MTH00226 306 GIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHH 376
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 847704 378 SQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFY 445
Cdd:MTH00226 377 TRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVY 444
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
1.34e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 61.41 E-value: 1.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLLPLFIVIPhimnfislIGIITVFLGATLALAQKDIKRG 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVITSKLLLS--------VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 319 LAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSVIHSMETL-VGYCPKKSQNMVLMGG----------- 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFgTRTPTSRQRDGSFGNYnlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 847704 387 LTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDS-----------WLYSSIFAIIAwstAGLTAFYMCRI 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiafssslsiYYLVALFAIIC---TCISAFYYIRI 533
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
46-357 |
1.38e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 57.83 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 46 LLLSIVMIFSMNLSIHQINSSSVYQYVWSWIINNDFSLEFGYL-IDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRF 124
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 125 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFE 204
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 205 FrdlfqifnnLISNNEVNFVFVT-LCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------ 276
Cdd:MTH00014 173 M---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggyg 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 277 VARLLPLFIVIPHIM-NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYS 352
Cdd:MTH00014 237 LLRMSSLFMHINKSLsAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLC 316
|
....*
gi 847704 353 KALLF 357
Cdd:MTH00014 317 SSALF 321
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
227-423 |
4.97e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 55.60 E-value: 4.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 227 TLCAVLLFAGAIaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPHI-MNFISLIGIITVFLG 305
Cdd:MTH00112 93 TSCTLLTLALAM-KLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsVIHSMETlvgycpKKSQNMVLMG 385
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTSW 234
|
170 180 190
....*....|....*....|....*....|....*...
gi 847704 386 GLTKHVPITknsFLLGTLSLCGIPPLACFWSKDEILND 423
Cdd:MTH00112 235 TKSPTLNTT---LMLTLLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
135-353 |
1.03e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 55.06 E-value: 1.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 135 MLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLfqiFNN 214
Cdd:MTH00217 122 LMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL---CCL 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 215 LISNNEVNFVFvtlcaVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPHIMN 292
Cdd:MTH00217 199 KIEKELQYFIF-----LGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSP 273
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 293 FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG------------------YMMLALGMGSyrSALFHLITHAYSK 353
Cdd:MTH00217 274 LIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtlgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
1.35e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 54.79 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 87 YLIDPLTSIMSILITTVGIMVLIYSDN--------YMSHDHGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 159 YLLIgfwfTRPVAAKACQKAFVTNRVGDFG--LLLGILGFYW-ITGSFEFRDLFQIFNNlisnnEVNFVFVTLCAVLLFA 235
Cdd:PRK06591 152 YVLI----ASGNNPKSLIGAFDYLIMGSIGatLILIAIGFLLsITGSLNMTDIAAYLQE-----HTNSRIITIAIGFFLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 236 GAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHI----MNFISLIGIITVFLGATLALA 311
Cdd:PRK06591 223 GAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAYQ 302
|
250 260
....*....|....*....|.
gi 847704 312 QKDIKRGLAYSTMSQLGYMML 332
Cdd:PRK06591 303 AKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
20-466 |
1.94e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 54.17 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 20 MLIGLGLLLFPTATKSLRRMW---AFQSVLLLSIVMIFSMNLSIHQINSSSvyqyvwswiinndfsleFGYLIDPLTSIM 96
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWrstTFFSFLIALLFLLWFKWSSEVGWSFSN-----------------LYLSYDPLSSPL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 97 SILITTVGIMVLIYSDNYMsHDHGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAK 173
Cdd:MTH00206 65 VILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLN 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrDLFQIFNNLISNNEVNFVFVTLcavllfaGAIAKSAQFPLHVWLPDA 253
Cdd:MTH00206 144 AGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYGVHLWLPKA 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 254 -MEGPTpisalihAATMVAAGIFLVA---RLLPLFIVIPHIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMS 325
Cdd:MTH00206 216 hVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKlssyFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVS 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 326 QLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsvihsmetlVGYCPKKSQNMVLMGGLTKHVPITKNSFLLG 401
Cdd:MTH00206 289 HMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLF 358
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 847704 402 TLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNYS 466
Cdd:MTH00206 359 FLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
127-449 |
6.78e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.89 E-value: 6.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 127 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGICSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSF 203
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 204 efrDLFQIFNNLIsnnevnfvfvtlcAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:MTH00200 85 ---GISEMLGPLS-------------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 284 FIviphiMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsv 363
Cdd:MTH00200 149 LN-----SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 364 ihsMETLvgycpkKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYS-SIFAIIAWSTAGLT 442
Cdd:MTH00200 219 ---LNLL------NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLS 289
|
....*..
gi 847704 443 AFYMCRI 449
Cdd:MTH00200 290 LFFYLRL 296
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-435 |
9.86e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 51.43 E-value: 9.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 222 NFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPHIMnfisLIGIIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLC----VISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 847704 382 VLMGGLtkhvpitknsfllgtLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIA 435
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILL 273
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
122-464 |
4.53e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 49.95 E-value: 4.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 122 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITG 201
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 202 SFEFRDLfQIFNNLISNNEVNFVFVTLC--AVLLfagaiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 279
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 280 LLPLFIVIPHIMN--FISLiGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKA 354
Cdd:MTH00127 247 MMVMLDPLTKELSypFIIL-ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 355 LLFLGSGSvihsmetlvGYCPKKSQNMVLMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAII 434
Cdd:MTH00127 326 ALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|
gi 847704 435 AWSTAGLTAFYMCRIYLLTFEGHLNVHFQN 464
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-461 |
4.76e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 49.91 E-value: 4.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 88 LIDPLTSIMSILITTVGIMVLIYSDNYMSHD-HGYLRFFAYMSFF-STSMLGLVTSSNLIQIYIFWELVGICSYLLIGFW 165
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKNEpINRQRTYISMLIIlQLTLILAFSATELILFYIFFEATLIPTLIIITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 166 FTRPVAAKACQK-AFVTnRVGDFGLLLGILGFYWITGSFEFrDLFQIFNNLISNNEVNFVFVTLCaVLLFagaIAKSAQF 244
Cdd:MTH00068 137 GNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAF---MVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 245 PLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF--IVIPHIMNFI--SLIGIItvfLGATLALAQK 313
Cdd:MTH00068 211 GLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILLtpLSKELSYPFIilALWGVL---MTSLICLRQT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 314 DIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSGSvihsmetlvgYCPKKSQNMVLMGGLTK 389
Cdd:MTH00068 281 DLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRGAQT 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 847704 390 HVPITKNSFLLGTLSLCGIPPLACFWSKDEILNDSWLYSSIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVH 461
Cdd:MTH00068 351 ILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
124-433 |
2.21e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 47.23 E-value: 2.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 124 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSF 203
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 204 efrdlfqifnnLISNNEVNFVFVTLCAVLLFagaiaKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPL 283
Cdd:MTH00041 85 -----------SINGPLNTLSSIIITLALAL-----KLGLAPCHFWFPDVLQGLPFLQGLI---------IATWQKIAPL 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 284 FIVIPHI----MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 359
Cdd:MTH00041 140 ILLISISnllnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIG 219
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 360 SgsvIHSMETLVGycpkksqnmvlMGGLTKHVPITKNSFLLGTLSLCGIPPLACFWSK-----DEILNDSWLYSSIFAI 433
Cdd:MTH00041 220 N---NFSLSTLSH-----------LNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
136-370 |
2.92e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 47.25 E-value: 2.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 136 LGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTnRVGDFGLLLGIL--GFYWITG-SFEFRDLfqif 212
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLYGSNEpTLNFETL---- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 213 nnliSNNEVNfvfVTLCAVLLFAGAIA---KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA---------- 278
Cdd:CHL00011 201 ----ANQSYP---VALEILFYIGFLIAyavKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinm 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 279 RLLP--LFIVIPHIMnfisLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAY 351
Cdd:CHL00011 267 ELLPhaHSIFSPWLV----IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGF 340
|
250
....*....|....*....
gi 847704 352 SKALLFLGSGSVIHSMETL 370
Cdd:CHL00011 341 IGAALFFLAGTSYDRIRLV 359
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
69-434 |
6.11e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 45.99 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 69 YQYVWSWIINNDFslefgYLIDPLTSIMSILITTVGIMVLIYSdNYMshdhgyLRFFAYMSFFSTSMLGLV-------TS 141
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-QKS------VKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 142 SNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFrdlfqIFNNLISNNEV 221
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 222 NFVFVTLCAVLLFagaIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPhiMNFI 294
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSFS 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 295 SLIGIITV---FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgsvihsme 368
Cdd:MTH00150 218 IFLISLSLwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF----------- 286
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 369 TLVGYCPKKSQ--NMVLMGGLTKHVPITknSFLLGTLSLC--GIPPLACFWSKDEILNDSWLYSSIFAII 434
Cdd:MTH00150 287 CLANYTYEKVHsrSLFLSKGMLMLYPSL--SLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSPWFFVP 354
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
44-330 |
1.08e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 45.35 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 44 SVLLLSIVMIFSMNLSIhQINSSSVYQYVWSWIINNDFSLEFGYL-----IDPLTSIMSILITTVGIMVLIYSDNYMS-H 117
Cdd:MTH00044 10 GIAITSWIVPKNKLWPI-SISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASINHLSnN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 118 DHGYLRFFAYMSFFSTSMLGLVTSS-NLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGF 196
Cdd:MTH00044 89 SPNNQRTFISLIIIILTALIITFSSlELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 197 YWITGSfefrdLFQIFNNLISNNEVNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 275
Cdd:MTH00044 169 YSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 847704 276 LVARLLPLFIVIphIMNFISLIGIITVFLGATLA----LAQKDIKRGLAYSTMSQLGYM 330
Cdd:MTH00044 243 GLIRLINLFSLP--SANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLV 299
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-422 |
1.25e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 44.66 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 222 NFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIVIPHIMNFISLI--GI 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 300 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 847704 380 NMVLmggltkhvpitknsFLLGTLSLCGIPPLACFWSKDEILN 422
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILT 253
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-351 |
1.65e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 41.50 E-value: 1.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 82 SLEFGYLIDPLTSIMSILITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFQIFNNLISNNevnfvfvTLCAVLLFAgAIAKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLF-------LYWIFLMLA-FLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPHIMNFISLIGIITVFLGATLALAQK 313
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQV 272
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 847704 314 DIKRGLAYS-------------TMSQLGY-----MMLALGMGSyrSALFHLITHAY 351
Cdd:MTH00205 273 DLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCS--SGMFALANVNY 326
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-436 |
1.78e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 41.64 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 221 VNFVFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVIPHIMnfISLIGII 300
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFFSGEEI--LLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 301 TVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSVIHSMETLvgycp 375
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 847704 376 kksqNMVLMGGLTKhVPITKNSFLLGTLSLCGIPPLACFWSKDEILN-------DSWLYSSIFAIIAW 436
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHsidtaglTLVLYKKLFLICSL 348
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
20-353 |
1.94e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 41.29 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 20 MLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIhqinsssvyqyvwswiINNDFSLEFGYLIDPLTSIMSIL 99
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSL----------------SFYFSNISYFFGLDLLSFGLILL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 100 ITTVGIMVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGICSYLLIGFWFTRPVAAKACQKAF 179
Cdd:MTH00163 65 SFWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 180 VTNRVGDFGLLLGILGFYWITGSFefrdlfqIFNNLISNNEVNFVFVtLCAVLLFagaIAKSAQFPLHVWLPDA-MEGPT 258
Cdd:MTH00163 145 FYTLFASLPLLVGIFYLYNNSGSL-------SFFLLNFFGSLNFLWY-LSMILAF---LVKMPMFFVHLWLPKAhVEAPV 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 259 PISaLIHAATMVAAGIFLVARLLPLFIVIPHIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYS-------------TM 324
Cdd:MTH00163 214 SGS-MILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIwISISLVGGVIVSLICLRQVDLKSLIAYSsvahmglvlgglmTF 292
|
330 340 350
....*....|....*....|....*....|....
gi 847704 325 SQLGY-----MMLALGMGSyrSALFHLITHAYSK 353
Cdd:MTH00163 293 SYWGLmgsllMMIGHGLCS--SGLFCLANIIYER 324
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
245-421 |
6.65e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 6.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 245 PLHVWLPDAMEGPTPISALIHA-----ATMVaagiflvarllpLFIVIPHIMN--FISLIGIITVFLGATLALAQKDIKR 317
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPMA------------LLIQISHLLNsnLLIIMGLLSTLIGGWGGLNQTQLRK 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 318 GLAYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsvihSMETLvgycpkKSQNMVLMGGLTKHVPITKNS 397
Cdd:MTH00070 178 IMAYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL-------MLMNL------NSTNINKLSSSWSKNPTLTSM 243
|
170 180
....*....|....*....|....
gi 847704 398 FLLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00070 244 MMLTLLSLGGLPPTTGFIPKWLIL 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-422 |
9.41e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 38.99 E-value: 9.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 230 AVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipHIMNFISLIGIITVFLGATLA 309
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 847704 310 LAQKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsVIHSMETLVGYCPKKSQNMvlMGGLTK 389
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISS 231
|
170 180 190
....*....|....*....|....*....|...
gi 847704 390 HVPITKNSFLLGTLSLCGIPPLACFWSKDEILN 422
Cdd:MTH00011 232 MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
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