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Conserved domains on  [gi|157831145|pdb|1FVX|A]
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Chain A, FLAVODOXIN

Protein Classification

NADPH-dependent FMN reductase family protein( domain architecture ID 325)

NADPH-dependent FMN reductase family protein contains a flavodoxin-like fold, which is characterized by an open twisted/alpha beta structure consisting of five parallel beta-sheets connected by alpha-helices which surround the sheet

CATH:  3.40.50.360
Gene Ontology:  GO:0010181
SCOP:  3001217

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FMN_red super family cl00438
NADPH-dependent FMN reductase;
3-136 5.93e-57

NADPH-dependent FMN reductase;


The actual alignment was detected with superfamily member PRK05568:

Pssm-ID: 469770 [Multi-domain]  Cd Length: 142  Bit Score: 173.84  E-value: 5.93e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEESEFEPFIEEISTKISGKKV 82
Cdd:PRK05568   6 IIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLEEGEMEPFVESISSLVKGKKL 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
1FVX_A        83 ALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEPD-EAEQDCIEFGKKIA 136
Cdd:PRK05568  86 VLFGSYGWGDGEWMRDWVERMEGYGANLVNEGLIVNNTPEgEGIEKCKALGEALA 140
 
Name Accession Description Interval E-value
PRK05568 PRK05568
flavodoxin; Provisional
 3-136 5.93e-57

flavodoxin; Provisional


Pssm-ID: 235508 [Multi-domain]  Cd Length: 142  Bit Score: 173.84  E-value: 5.93e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEESEFEPFIEEISTKISGKKV 82
Cdd:PRK05568   6 IIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLEEGEMEPFVESISSLVKGKKL 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
1FVX_A        83 ALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEPD-EAEQDCIEFGKKIA 136
Cdd:PRK05568  86 VLFGSYGWGDGEWMRDWVERMEGYGANLVNEGLIVNNTPEgEGIEKCKALGEALA 140
flav_short TIGR01753
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin ...
 2-136 1.49e-49

flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction. [Energy metabolism, Electron transport]


Pssm-ID: 273789 [Multi-domain]  Cd Length: 140  Bit Score: 154.80  E-value: 1.49e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A          2 KIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEESEFEPFIEEIS-TKISGK 80
Cdd:TIGR01753   2 LIVYASMTGNTEEMANIIAEGLKEAGAEVDLLEVADADAEDLLSYDAVLLGCSTWGDEDLEQDDFEPFFEELEdIDLGGK 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
1FVX_A         81 KVALFGSYGWGD--GKWMRDFEERMNGYGCVVVETPLIVQNEPDEAEQD-CIEFGKKIA 136
Cdd:TIGR01753  82 KVALFGSGDWGYefCEAVDDWEERLKEAGATIIAEGLKVDGDPEEEDLDkCREFAKDLA 140
FldA COG0716
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: ...
 3-135 6.79e-35

Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440480 [Multi-domain]  Cd Length: 135  Bit Score: 117.70  E-value: 6.79e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A        3 IVYWSGTGNTEKMAELIAKGIIESGKDVntINVSDVNIDELLNEDILILGCSAMNDEVleESEFEPFIEEISTKISGKKV 82
Cdd:COG0716   3 IVYGSTTGNTEKVAEAIAEALGAAGVDL--FEIEDADLDDLEDYDLLILGTPTWAGEL--PDDWEDFLEELKEDLSGKKV 78

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
1FVX_A       83 ALFGSYGWGD-GKWMRDFEERMNGYGCVVVETPLI---VQNEPDEAEQDCIEFGKKI 135
Cdd:COG0716  79 ALFGTGDSSGyGDALGELKELLEEKGAKVVGGYDFegsKAPDAEDTEERAEEWLKQL 135
Flavodoxin_1 pfam00258
Flavodoxin;
3-132 3.51e-18

Flavodoxin;


Pssm-ID: 425562 [Multi-domain]  Cd Length: 142  Bit Score: 75.10  E-value: 3.51e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A          3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNID--ELLNEDILILGCSAMNDEVLE------ESEFEPFIEEIS 74
Cdd:pfam00258   1 IFYGSQTGNTEKLAEAIAEGLGEAGFEVDVVDLDDVDETlsEIEEEDLLLVVVSTWGEGEPPdnakpfVDWLLLFGTLED 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
1FVX_A         75 TKISGKKVALF--GSYGW-GDGKWMRDFEERMNGYGCVVVETPLIVQNEPDEAEQ-DCIEFG 132
Cdd:pfam00258  81 GDLSGLKYAVFglGDSGYeGFCGAAKKLDEKLSELGASRVGPLGEGDEDPQEDGLeEAFEAW 142
 
Name Accession Description Interval E-value
PRK05568 PRK05568
flavodoxin; Provisional
 3-136 5.93e-57

flavodoxin; Provisional


Pssm-ID: 235508 [Multi-domain]  Cd Length: 142  Bit Score: 173.84  E-value: 5.93e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEESEFEPFIEEISTKISGKKV 82
Cdd:PRK05568   6 IIYWSGTGNTEAMANLIAEGAKENGAEVKLLNVSEASVDDVKGADVVALGSPAMGDEVLEEGEMEPFVESISSLVKGKKL 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
1FVX_A        83 ALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEPD-EAEQDCIEFGKKIA 136
Cdd:PRK05568  86 VLFGSYGWGDGEWMRDWVERMEGYGANLVNEGLIVNNTPEgEGIEKCKALGEALA 140
flav_short TIGR01753
flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin ...
 2-136 1.49e-49

flavodoxin, short chain; Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the short chain type. Many of these are involved in sulfite reduction. [Energy metabolism, Electron transport]


Pssm-ID: 273789 [Multi-domain]  Cd Length: 140  Bit Score: 154.80  E-value: 1.49e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A          2 KIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEESEFEPFIEEIS-TKISGK 80
Cdd:TIGR01753   2 LIVYASMTGNTEEMANIIAEGLKEAGAEVDLLEVADADAEDLLSYDAVLLGCSTWGDEDLEQDDFEPFFEELEdIDLGGK 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
1FVX_A         81 KVALFGSYGWGD--GKWMRDFEERMNGYGCVVVETPLIVQNEPDEAEQD-CIEFGKKIA 136
Cdd:TIGR01753  82 KVALFGSGDWGYefCEAVDDWEERLKEAGATIIAEGLKVDGDPEEEDLDkCREFAKDLA 140
FldA COG0716
Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: ...
 3-135 6.79e-35

Flavodoxin [Energy production and conversion]; Flavodoxin is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440480 [Multi-domain]  Cd Length: 135  Bit Score: 117.70  E-value: 6.79e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A        3 IVYWSGTGNTEKMAELIAKGIIESGKDVntINVSDVNIDELLNEDILILGCSAMNDEVleESEFEPFIEEISTKISGKKV 82
Cdd:COG0716   3 IVYGSTTGNTEKVAEAIAEALGAAGVDL--FEIEDADLDDLEDYDLLILGTPTWAGEL--PDDWEDFLEELKEDLSGKKV 78

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
1FVX_A       83 ALFGSYGWGD-GKWMRDFEERMNGYGCVVVETPLI---VQNEPDEAEQDCIEFGKKI 135
Cdd:COG0716  79 ALFGTGDSSGyGDALGELKELLEEKGAKVVGGYDFegsKAPDAEDTEERAEEWLKQL 135
PRK05569 PRK05569
flavodoxin; Provisional
 3-137 9.14e-29

flavodoxin; Provisional


Pssm-ID: 135442 [Multi-domain]  Cd Length: 141  Bit Score: 102.22  E-value: 9.14e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEESEFEPFIEEIS-TKISGKK 81
Cdd:PRK05569   6 IIYWSCGGNVEVLANTIADGAKEAGAEVTIKHVADAKVEDVLEADAVAFGSPSMDNNNIEQEEMAPFLDQFKlTPNENKK 85

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
1FVX_A        82 VALFGSYGWGDGKWMRDFEERMNGYGCVVVETpLIVQNEPDEAEQDCI-EFGKKIAN 137
Cdd:PRK05569  86 CILFGSYGWDNGEFMKLWKDRMKDYGFNVIGD-LAVNESPNKEELNSAkELGKKLAK 141
NorV COG0426
Flavorubredoxin [Energy production and conversion];
3-136 1.30e-23

Flavorubredoxin [Energy production and conversion];


Pssm-ID: 440195 [Multi-domain]  Cd Length: 390  Bit Score: 94.13  E-value: 1.30e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A        3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNE----DILILGCSAMNDEVLEesEFEPFIEEI-STKI 77
Cdd:COG0426 251 IVYASMYGNTEKMAEAIAEGLTEEGVKVKLYDLEKTDPSEIITEifdaKGIVIGSPTYNGGAFP--PIADLLGYLkGLAP 328

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A       78 SGKKVALFGSYGWGdGKWMRDFEERMNGYGCVVVETPLIVQNEPDEAE-QDCIEFGKKIA 136
Cdd:COG0426 329 KNKLAGAFGSYGWS-GEAVKLLEEKLEDAGFEVVFEPLRVKFKPTEEDlKKCEELGTDLA 387
Flavodoxin_1 pfam00258
Flavodoxin;
3-132 3.51e-18

Flavodoxin;


Pssm-ID: 425562 [Multi-domain]  Cd Length: 142  Bit Score: 75.10  E-value: 3.51e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A          3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNID--ELLNEDILILGCSAMNDEVLE------ESEFEPFIEEIS 74
Cdd:pfam00258   1 IFYGSQTGNTEKLAEAIAEGLGEAGFEVDVVDLDDVDETlsEIEEEDLLLVVVSTWGEGEPPdnakpfVDWLLLFGTLED 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
1FVX_A         75 TKISGKKVALF--GSYGW-GDGKWMRDFEERMNGYGCVVVETPLIVQNEPDEAEQ-DCIEFG 132
Cdd:pfam00258  81 GDLSGLKYAVFglGDSGYeGFCGAAKKLDEKLSELGASRVGPLGEGDEDPQEDGLeEAFEAW 142
PRK11921 PRK11921
anaerobic nitric oxide reductase flavorubredoxin;
3-137 6.48e-15

anaerobic nitric oxide reductase flavorubredoxin;


Pssm-ID: 237023 [Multi-domain]  Cd Length: 394  Bit Score: 69.72  E-value: 6.48e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNT--INV--SDVN--IDELLNEDILILGCSAMNDEVLeeSEFEPFIEEI-ST 75
Cdd:PRK11921 252 ILYDTMWNSTRRMAEAIAEGIKKANKDVTVklYNSakSDKNdiITEVFKSKAILVGSSTINRGIL--SSTAAILEEIkGL 329

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
1FVX_A        76 KISGKKVALFGSYGWGdGKWMRDFEERMNGYGCVVVETPLIVQNEPD-EAEQDCIEFGKKIAN 137
Cdd:PRK11921 330 GFKNKKAAAFGSYGWS-GESVKIITERLKKAGFEIVNDGIRELWNPDdEALDRCRSFGENFAE 391
PRK09267 PRK09267
flavodoxin FldA; Validated
 3-86 8.27e-14

flavodoxin FldA; Validated


Pssm-ID: 236439 [Multi-domain]  Cd Length: 169  Bit Score: 64.47  E-value: 8.27e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVntINVSDVNIDELLNEDILILGCSAMNDEVLEES--EFEPFIEEIstKISGK 80
Cdd:PRK09267   6 IFFGSDTGNTEDIAKMIQKKLGKDVADV--VDIAKASKEDFEAYDLLILGIPTWGYGELQCDwdDFLPELEEI--DFSGK 81


                 ....*.
1FVX_A        81 KVALFG 86
Cdd:PRK09267  82 KVALFG 87
PRK06703 PRK06703
flavodoxin; Provisional
 3-131 1.20e-12

flavodoxin; Provisional


Pssm-ID: 235854 [Multi-domain]  Cd Length: 151  Bit Score: 60.93  E-value: 1.20e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLeESEFEPFIEEIST-KISGKK 81
Cdd:PRK06703   6 IAYASMSGNTEDIADLIKVSLDAFDHEVVLQEMDGMDAEELLAYDGIILGSYTWGDGDL-PYEAEDFHEDLENiDLSGKK 84

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
1FVX_A        82 VALFGSygwGDGKWMR------DFEERMNGYGCVVVETPLIVQNEPDEAE--QDCIEF 131
Cdd:PRK06703  85 VAVFGS---GDTAYPLfceavtIFEERLVERGAELVQEGLKIELAPETDEdvEKCSNF 139
PRK05452 PRK05452
anaerobic nitric oxide reductase flavorubredoxin; Provisional
 3-136 5.00e-11

anaerobic nitric oxide reductase flavorubredoxin; Provisional


Pssm-ID: 235475 [Multi-domain]  Cd Length: 479  Bit Score: 59.00  E-value: 5.00e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGI--IESGKDVNTINVSDVNIDELL-----NEDILIlGCSAMNDEVLeeSEFEPFIEEIS- 74
Cdd:PRK05452 256 IFYDTMSNNTRMMADAIAQGIaeVDPRVAVKIFNVARSDKNEILtnvfrSKGVLV-GSSTMNNVMM--PKIAGLLEEITg 332

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
1FVX_A        75 TKISGKKVALFGSYGWGDGKWMRdFEERMNGYGcvvVET--PLIVQNEPD-EAEQDCIEFGKKIA 136
Cdd:PRK05452 333 LRFRNKRASAFGSHGWSGGAVDR-LSTRLQDAG---FEMslSLKAKWRPDqDALELCREHGREIA 393
PRK06756 PRK06756
flavodoxin; Provisional
 3-136 9.06e-10

flavodoxin; Provisional


Pssm-ID: 168663 [Multi-domain]  Cd Length: 148  Bit Score: 53.34  E-value: 9.06e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDV-NIDELLNEDILILGCSAMNDEVLEEsEFEPFIEEI-STKISGK 80
Cdd:PRK06756   6 MIFASMSGNTEEMADHIAGVIRETENEIEVIDIMDSpEASILEQYDGIILGAYTWGDGDLPD-DFLDFYDAMdSIDLTGK 84

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
1FVX_A        81 KVALFGS-------YGWGDGKWMRDFEERmngyGCVVVETPLIVQNEP-DEAEQDCIEFGKKIA 136
Cdd:PRK06756  85 KAAVFGScdsaypkYGVAVDILIEKLQER----GAAVVLEGLKVELTPeDEDVEKCLQFGAEFV 144
Flavodoxin_3 pfam12641
Flavodoxin domain; This family represents a flavodoxin domain.
 3-92 1.14e-07

Flavodoxin domain; This family represents a flavodoxin domain.


Pssm-ID: 432690  Cd Length: 159  Bit Score: 48.04  E-value: 1.14e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A          3 IVYWSGTGNTEKMAELIAKgIIESGKDVNTINVSDVNIDELlneDILILGC-----SAmNDEVLEesefepFIEeistKI 77
Cdd:pfam12641   2 ILYSSLTGNTKKVAEAIFE-ALPEEKDIIDFGELKDKIPEY---DIVFVGFwvdkgNA-DEEALD------FLE----TL 66

                          90
                  ....*....|....*
1FVX_A         78 SGKKVALFGSYGWGD 92
Cdd:pfam12641  67 KNKKIFLFGTLGAGP 81
PRK07308 PRK07308
flavodoxin; Validated
 2-137 1.86e-07

flavodoxin; Validated


Pssm-ID: 180922 [Multi-domain]  Cd Length: 146  Bit Score: 47.09  E-value: 1.86e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         2 KIVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAMNDEVLEEsEFEPFIEEIST-KISGK 80
Cdd:PRK07308   5 KIVYASMTGNTEEIADIVADKLRELGHDVDVDECTTVDASDFEDADIAIVATYTYGDGELPD-EIVDFYEDLADlDLSGK 83

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
1FVX_A        81 kvaLFGSYGWGDG------KWMRDFEERMNGYGCVVVETPLIVQNEPDEAEQDCIE-FGKKIAN 137
Cdd:PRK07308  84 ---IYGVVGSGDTfydyfcKSVDDFEAQFALTGATKGAESVKVDLAAEDEDIERLEaFAEELAA 144
WrbA COG0655
Multimeric flavodoxin WrbA, includes NAD(P)H:quinone oxidoreductase [Energy production and ...
 7-138 3.36e-07

Multimeric flavodoxin WrbA, includes NAD(P)H:quinone oxidoreductase [Energy production and conversion];


Pssm-ID: 440420 [Multi-domain]  Cd Length: 181  Bit Score: 46.85  E-value: 3.36e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A        7 SGTGNTEKMAELIAKGIIESGKDVNTINVSDVNI----------------------DELLNEDILILGC----SAMNdev 60
Cdd:COG0655  10 RKNGNTAALAEAVAEGAEEAGAEVELIRLADLDIkpcigcggtgkcvikddmnaiyEKLLEADGIIFGSptyfGNMS--- 86

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A       61 leeSEFEPFIEEIS------TKISGKKVALFGSYGwGDGK-----WMRDFeerMNGYGCVVVETPLI--------VQNEP 121
Cdd:COG0655  87 ---AQLKAFIDRLYalwakgKLLKGKVGAVFTTGG-HGGAeatllSLNTF---LLHHGMIVVGLPPYgavggggpGDVLD 159

                       170
                ....*....|....*..
1FVX_A      122 DEAEQDCIEFGKKIANI 138
Cdd:COG0655 160 EEGLATARELGKRLAEL 176
PRK06242 PRK06242
flavodoxin; Provisional
 1-111 2.11e-05

flavodoxin; Provisional


Pssm-ID: 180484 [Multi-domain]  Cd Length: 150  Bit Score: 41.44  E-value: 2.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         1 MK--IVYWS-GTGNTEKMAELIAKGIiesgkDVNTINVSDVNIDELLNEDILILGCS----AMNDEVLEesefepFIEEI 73
Cdd:PRK06242   1 MKalIVYASvHHGNTEKIAKAIAEVL-----DAEVIDPGDVNPEDLSEYDLIGFGSGiyfgKFHKSLLK------LIEKL 69

                         90       100       110
                 ....*....|....*....|....*....|....*...
1FVX_A        74 StKISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVV 111
Cdd:PRK06242  70 P-PVSGKKAFIFSTSGLPFLKYHKALKKKLKEKGFEIV 106
HemG COG4635
Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain) [Coenzyme transport ...
 1-87 1.06e-04

Protoporphyrinogen IX oxidase, menaquinone-dependent (flavodoxin domain) [Coenzyme transport and metabolism];


Pssm-ID: 443673  Cd Length: 179  Bit Score: 39.88  E-value: 1.06e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A        1 MK--IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCS----AMNDEVLEesefepFIEEIS 74
Cdd:COG4635   1 MKvlILYASRDGQTRKIAERIAEVLREAGHDVDLVDLEDAPDLDLAGYDAVVIGASirygKWLPEAVR------FVRRHR 74

                        90
                ....*....|...
1FVX_A       75 TKISGKKVALFGS 87
Cdd:COG4635  75 DALAARPVAFFSV 87
PRK12359 PRK12359
flavodoxin FldB; Provisional
 1-98 1.99e-04

flavodoxin FldB; Provisional


Pssm-ID: 183471 [Multi-domain]  Cd Length: 172  Bit Score: 39.16  E-value: 1.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A         1 MKI--VYWSGTGNTEKMAELIAKGIiesGKDVNTI-NVSDVNIDELLNEDILILGCSAMNDEVLEEsEFEPFIEEIST-K 76
Cdd:PRK12359   1 MKIglFYGSSTCYTEMAAEKIRDII---GEELVDLhNLKDDPPKLMEQYDVLILGIPTWDFGEIQE-DWEAVWDQLDDlN 76

                         90       100
                 ....*....|....*....|....*.
1FVX_A        77 ISGKKVALfgsYGWGD----GKWMRD 98
Cdd:PRK12359  77 LEGKIVAL---YGMGDqlgyGEWFLD 99
Flavodoxin_5 pfam12724
Flavodoxin domain; This is a family of flavodoxins. Flavodoxins are electron transfer proteins ...
 3-85 6.22e-04

Flavodoxin domain; This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.


Pssm-ID: 463681 [Multi-domain]  Cd Length: 144  Bit Score: 37.63  E-value: 6.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A          3 IVYWSGTGNTEKMAELIAKGIIESGKDVNTINVSDVniDELLNEDILILGCSAMNDEVLeeSEFEPFIEEISTKISGKKV 82
Cdd:pfam12724   2 ILYSSRDGQTKKIAERIAEELREEGELVDVEDVEAG--EDLSSYDAVVIGASIYYGKHL--PELRQFVTKHRDELSSKPV 77


                  ...
1FVX_A         83 ALF 85
Cdd:pfam12724  78 AFF 80
ProC COG0345
Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; ...
 8-82 7.06e-03

Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; Pyrroline-5-carboxylate reductase is part of the Pathway/BioSystem: Proline biosynthesis


Pssm-ID: 440114 [Multi-domain]  Cd Length: 267  Bit Score: 35.04  E-value: 7.06e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1FVX_A        8 GTGNtekMAELIAKGIIESGKDVNTINVSDVNIDEL--LNEDiliLGCSAM--NDEVLEESE----------FEPFIEEI 73
Cdd:COG0345   9 GAGN---MGSAIIKGLLKSGVPPEDIIVSDRSPERLeaLAER---YGVRVTtdNAEAAAQADvvvlavkpqdLAEVLEEL 82


                ....*....
1FVX_A       74 STKISGKKV 82
Cdd:COG0345  83 APLLDPDKL 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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