1PEG,4NJ5


Conserved Protein Domain Family
Pre-SET

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pfam05033: Pre-SET (this model, PSSM-Id:461530 is obsolete and has been replaced by 461530)
Pre-SET motif
This protein motif is a zinc binding motif. It contains 9 conserved cysteines that coordinate three zinc ions. It is thought that this region plays a structural role in stabilising SET domains.
Statistics
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PSSM-Id: 461530
Aligned: 298 rows
Threshold Bit Score: 36.2434
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1PEG_A         2 RSFATHaQLPISIVnrEDDAfl-npNFRFidhsiigknv------------------------pvadqsfrvGCS--Cas 54  Neurospora crassa
XP_002525696  53 ASQSFEnNNRIPFHnpLGNIpy--aYFLYtqshllpsqspkrqswg----------gatcvsssqgdgdgifKCD--C-- 116
XP_002966287  64 IAKGAE-SVPIPFVrapggdeslpedFTYtavavayekaki--------------------eirlckieqdnCCTa-Cf- 120
EEF41105     258 VSRGEE-KMQFPLVneYGALel--pNFLYikknmvhkdahv--------------------dlslarisennFCAq-Cy- 312
EEF35829     462 ITKGEE-LVEISWLneINNEcp--sSFNYipenlifqdahv--------------------kftlsqiiaedCCSt-Ci- 516
Q946J2       410 ITAGEE-NVEIPWVneINEKvp--sRFRYmphsfvfqdapv--------------------ifslssfsdeqSCStsCi- 465 thale cress
NP_001190469 376 ISLGKE-TVEIPWVneVNDKvp--pVFHYiaqslvyqdaav--------------------kfslgnirddqCCSs-Cc- 430
VDC69085     427 ITFGKE-TVEIPWVneVNTKvp--sPFRYmtqslvyldae---------------------lkfslgnvkdqCCSs-Cc- 480
RID75738     289 VTLGKE-TLEIPWVneVNSKvp--pPFRYipqsyvyldaav-------------------kfsvgnmrdddqRCSs-Cc- 344
EES01534      51 AARGLE-PLPIPFRncVDSKpy--aYFLYtpfsltrlapgasapsaqpwgaawvrppgptwprpnldgfpssVCG--Ca- 124
1PEG_A        55 dEeC-----MYSTCQ-CLDemapdsdeeadpytRKKRfAYYSqg------------akKGLLRDrv-------------- 102 Neurospora crassa
XP_002525696 117 ------------DCEgCEQ----------------------EddasgvdfvlgleemeMGIM------------------ 144
XP_002966287 121 -GnCl---kKKWPCH-CARe------------tGGEF-AYNE----------------DGCVKKellrqavretqgdeac 166
EEF41105     313 -GdCl---sSALPCA-CAGe------------tRGEF-AYTR----------------QGLVKEefldeciamsreperk 358
EEF35829     517 -GdCl---sSTTVCV-CAAe------------tGDKF-AYTS----------------EGLLREdfledcismtrdphrq 562
Q946J2       466 -EdCl---aSEMSCN-CAIg------------vDNGF-AYTL----------------DGLLKEefleariseardqrkq 511 thale cress
NP_001190469 431 -GdCl---aPSMACR-CATa------------fNGF--AYTV----------------DGLLQEdfleqciseardprkq 475
VDC69085     481 -GdCl---sPAMACS-CATa------------lGGF--AYTK----------------DGLLQKdfleecisearnpqkq 525
RID75738     345 -GdCl---aPSVACS-CATa------------lSGLT-SYTK----------------DGLLQNdfleecvseardpqkh 390
EES01534     125 ---CaaaecGGTQCA-CSD----------------------Adadaag----pgfeagMGSL------------------ 156
1PEG_A       103 ---------------------------lQSQEPIYECHQGCAC-SkDCPNR 125 Neurospora crassa
XP_002525696 145 ----------------------------------SECGATCECgL-KCRNR 160
XP_002966287 167 rrvt----cekecpmevargstekcrghIVRRFIKECWVKCTChKkLCGNR 213
EEF41105     359 yfyyceicpmqndlnrkksrrikpckghLMRKFIKECWSKCGC-SrKCRNR 408
EEF35829     563 clsyc---kacplerskneeilepckghLKRKHIKECWRKCAC-HrLCGNR 609
Q946J2       512 vlrfc---eecplerakkveilepckghLKRGAIKECWFKCGC-TkRCGNR 558 thale cress
NP_001190469 476 mllyc---kecplekakkevilepckghLKRKAIKECWSKCGC-MkNCGNR 522
VDC69085     526 vvqyc---kecpleiakneetlepckghLKRKAIRECWINCGC-TkKCGNQ 572
RID75738     391 vlqfc---kecpleraknieilepckghLKRKAIKECWINCGC-InKCGNR 437
EES01534     157 ----------------------------------RECGDGCACaP-SCRNR 172
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