6PIS,4TWK


Conserved Protein Domain Family
Ion_trans_2

?
pfam07885: Ion_trans_2 (this model, PSSM-Id:429715 is obsolete and has been replaced by 462301)
Click on image for an interactive view with Cn3D
Ion channel
This family includes the two membrane helix type ion channels found in bacteria.
Statistics
?
PSSM-Id: 429715
Aligned: 96 rows
Threshold Bit Score: 36.7968
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6PIS_A 207 CLLFVLTPTFVFSYMes-----------wSKLEAIYFVIVTLTTVGFGDYVPG-DGTgqnspayQPLV-WFWILFGLAYF 273 house mouse
Q19525  89 TAEMKSKLGKCLTKSsr----------idGFGKAIFFSWTLYSTVGYGSLYPHsTLG-------RYLT-IFYSLLMIPVF 150 Caenorhabditis elegans
Q8HZT2  95 IIEAYKNGDIVLGNTtsm--------grwEFVGSFFFSVSTITTIGYGNLSPR-TMAa------RLFC-IFFALVGIPLN 158 cattle
Q920B6 121 IVTAINAGIIPLGNNsnqv-------shwDLGSSFFFAGTVITTIGFGNISPR-TEGg------KIFC-IIYALLGIPLF 185 Norway rat
Q22271 261 VSETVDDRRPIRRELnrpddls-nmhnkwTFPTAILYVLTVLTTCGYGEVSVD-TDVg------KVFS-VAFALVGIPLM 331 Caenorhabditis elegans
O76788 151 LSRAHEYDDKFTDTNqlwtgeqdgmttrwTFAAATLYALTVITSTGYDHVTPA-TDPg------RIFT-VFFGLIGIPLM 222 Caenorhabditis elegans
Q93732 113 AAIAERCLTENVKDDrm----------qwSFKSAALYSLGILTTLGYGKIEPQtING--------RIStVIYGFFGIPLT 174 Caenorhabditis elegans
O45894 292 MKLEGQYKGSTYYKLeadd------nwkwTFESAFFFSMNVYTTTGYGSIAPE-STLg------QVLV-CVYGFIFVPVT 357 Caenorhabditis elegans
Q21529 111 LEDAHNAHAFEYFFLnheip-----kdmwTFSSALVFTTTTVIPVGYGYIFPV-SAYg------RMCL-IAYALLGIPLT 177 Caenorhabditis elegans
Q21094 102 MVRFISDGATSGLLNsrs---------rfDHLGSLFFSATVISTIGFGTSTPR-THLg------RFIT-IVYGVVGCTCC 164 Caenorhabditis elegans
6PIS_A 274 ASVLTTIGNWLR 285 house mouse
Q19525 151 IAFKFEFGTFLA 162 Caenorhabditis elegans
Q8HZT2 159 LVVLNRLGHCMQ 170 cattle
Q920B6 186 GFLLAGVGDQLG 197 Norway rat
Q22271 332 FITAADIGKFLS 343 Caenorhabditis elegans
O76788 223 FITAADIGKFLS 234 Caenorhabditis elegans
Q93732 175 VILLTNFGRYLE 186 Caenorhabditis elegans
O45894 358 LVVLRDLGQFFL 369 Caenorhabditis elegans
Q21529 178 LVTMADTGKFAa 189 Caenorhabditis elegans
Q21094 165 VLFFNLFLERLV 176 Caenorhabditis elegans
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap