1WG4


Conserved Protein Domain Family
RRM2_SRSF9

?
cd12768: RRM2_SRSF9 
Click on image for an interactive view with Cn3D
RNA recognition motif 2 (RRM2) found in vertebrate serine/arginine-rich splicing factor 9 (SRSF9)
This subgroup corresponds to the RRM2 of SRSF9, also termed pre-mRNA-splicing factor SRp30C, an essential splicing regulatory serine/arginine (SR) protein that has been implicated in the activity of many elements that control splice site selection, the alternative splicing of the glucocorticoid receptor beta in neutrophils and in the gonadotropin-releasing hormone pre-mRNA. SRSF9 can also interact with other proteins implicated in alternative splicing, including YB-1, rSLM-1, rSLM-2, E4-ORF4, Nop30, and p32. SRSF9 contains two N-terminal RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains), followed by an unusually short C-terminal RS domains rich in serine-arginine dipeptides.
Statistics
?
PSSM-Id: 410161
Aligned: 3 rows
Threshold Bit Score: 155.601
Created: 14-Sep-2011
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1WG4_A         8 GPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87  house mouse
NP_001088400 114 GPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDGMGIVEFIRKEDMEYALRKLDDTKFRSHEGETSYIRV 193 African clawed ...
XP_003226054 127 GPPSRRSEFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGVVEFLRKEDMEYALRKLDDTKFRSHEGETSYIRV 206 green anole
1WG4_A        88 YPER 91  house mouse
NP_001088400 194 SPER 197 African clawed frog
XP_003226054 207 CPER 210 green anole
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap