Conserved Protein Domain Family
IgV_1_Necl-3

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cd07701: IgV_1_Necl-3 
First (N-terminal) immunoglobulin (Ig)-like domain of nectin-like molecule-3; member of the V-set of Ig superfamily (IgSF) domains
The members here are composed of the N-terminal immunoglobulin (Ig)-like domain of nectin-like molecule-3, Necl-3 (also known as cell adhesion molecule 2 (CADM2), SynCAM2, IGSF4D). Nectin-like molecules have similar domain structures to those of nectins. At least five nectin-like molecules have been identified (Necl-1 - Necl-5). They all have an extracellular region containing three Ig-like domains, a transmembrane region, and a cytoplasmic region. The N-terminal Ig-like domain of the extracellular region, belongs to the V-type subfamily of Ig domains, is essential to cell-cell adhesion, and plays a part in the interaction with the envelope glycoprotein D of various viruses. Necl-3 accumulates in central and peripheral nervous system tissue, and has been shown to selectively interact with oligodendrocytes.
Statistics
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PSSM-Id: 409498
Aligned: 3 rows
Threshold Bit Score: 198.004
Created: 21-Feb-2009
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Comment:Based on similarity to human CADM3 (Necl-1).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                               #  #    ## #     # #                                  
AAI12137   26 FPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCS 105 human
AAH57517   41 VPLVQNMTVTEGGTANLTCRVEHNDNTSLQWSNPAQQTLFFGDKKALRDNRIELVRATSQELTISISEVSLSDEGLYTCS 120 zebrafish
AAH75300   26 FPVTQNVTVVEGGTINLTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISISDVSLSDEGQYTCS 105 western clawed frog
Feature 1      #              
AAI12137  106 LFTMPVKTSKAYLTVL 121 human
AAH57517  121 LFTMPVKTAKAFLTVL 136 zebrafish
AAH75300  106 LFTMPVKTSKAYLMVL 121 western clawed frog

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