4WLQ,4IG7


Conserved Protein Domain Family
UCH_C

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pfam18031: UCH_C (this model, PSSM-Id:407868 is obsolete and has been replaced by 465622)
Ubiquitin carboxyl-terminal hydrolases
This is the C-terminal domain found in eukaryotic UCH37 proteins (also known as Ubiquitin carboxyl-terminal hydrolase isozyme L5, UCHL5). UCH37 is a subunit of two complexes: INO80, which performs ATP-dependent sliding of nucleosomes for transcriptional regulation and DNA repair, and the 26S proteasome, which performs ATP-dependent proteolysis of polyubiquitylated proteins in the cytosol and nucleus. Recruitment to the proteasome is mediated by the C-terminal domain of RPN13 (also known as ADRM1). Recruitment to INO80 is mediated by the N-terminal domain of NFRKB. Structural and biochemical analysis reveal that RPN13 and NFRKB make similar interactions with the UCH37 C-terminal domain but have very different interactions with the catalytic UCH domain that are activating in the case of RPN13 and highly inhibitory in the case of NFRKB.
Statistics
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PSSM-Id: 407868
Aligned: 32 rows
Threshold Bit Score: 45.6485
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4WLQ_A        263 VARNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQL 308 
KRX73902      831 VDRLVALIAAEDAKRERYAMEAARHRHNYVPFIVELLRILAEEEVL 876  Trichinella sp. T6
XP_002119457  263 LEQCKCLLNDETQKRQRNQVENIRRKHNYLPFIIEMIRILAAEEKL 308  vase tunicate
XP_012795201 1013 IKLCLSALIEEEEKRRSYRIDDARRIHNYEPFIRAFLTALARHGML 1058 Schistosoma haematobium
5_pfamImport    1 IANYEAC-QEEVER-GGSKTDDQRGTHNHNEFIGAFISTLPQESML 44  
KPI94388      422 VQACQQALNDENDKRDMYKVDDCRRTHNYDEFICTFLSMLAERGAL 467  Asian swallowtail
KZT41935      401 AKSAKASLEMEISRAKTVAAENAKRTHNYTPFIQEYIRCLSNEGML 446  Sistotremastrum suecicum HHB10207 ss-3
1_pfamImport    1 IDDLKKSIADENYKMEMYHRENNRRRHNYTPFLIKLMTILAREGKL 46  
4IG7_A        279 VDRLVALIAAEDAKRERYAMEAARHRHNYVPFIVELLRILAEEEVL 324 
XP_019022561  330 INDTEARIVDEETKATQYQEYAERRRHDYTPFIRKMIEKLNENGIL 375  Saitoella complicata NRRL Y-17804
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