1DCQ


Conserved Protein Domain Family
ArfGap_ASAP2

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cd08849: ArfGap_ASAP2 
Click on image for an interactive view with Cn3D
ArfGAP domain of ASAP2 (ArfGAP2 with SH3 domain, ANK repeat and PH domain-containing protein 2)
The Arf GAPs are a family of multidomain proteins with a common catalytic domain that promotes the hydrolysis of GTP bound to Arf , thereby inactivating Arf signaling. ASAP-subfamily GAPs include three members: ASAP1, ASAP2, ASAP3. The ASAP subfamily comprises Arf GAP, SH3, ANK repeat and PH domains. From the N-terminus, each member has a BAR, PH, Arf GAP, ANK repeat, and proline rich domains. Unlike ASAP3, ASAP1 and ASAP2 also have an SH3 domain at the C-terminus. ASAP1 and ASAP2 show strong GTPase-activating protein (GAP) activity toward Arf1 and Arf5 and weak activity toward Arf6. ASAP1 is a target of Src and FAK signaling that regulates focal adhesions, circular dorsal ruffles (CDR), invadopodia, and podosomes. ASAP1 GAP activity is synergistically stimulated by phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidic acid. ASAP2 is believed to function as an ArfGAP that controls ARF-mediated vesicle budding when recruited to Golgi membranes. It also functions as a substrate and downstream target for protein tyrosine kinases Pyk2 and Src, a pathway that may be involved in the regulation of vesicular transport.
Statistics
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PSSM-Id: 350074
Aligned: 5 rows
Threshold Bit Score: 268.768
Created: 13-Feb-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Structure:1DCQ; human ASAP2 binds Zn(2+) ion
    View structure with Cn3D
  • Comment:the coordination of the Zn(2+) ion by 4 cysteines would indicate that this ion plays a structure stabilization rather than catalytical role.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                          #  #                #  #                                       
1DCQ_A          3 LTKEIISEVQRMtGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFN 82   house mouse
NP_001084911  419 LTKEIISDIQRMpGNDVCCDCGASDPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLGTSELLLAKNIGNSGFN 498  African clawe...
NP_003878     419 LTKEIISEVQRMtGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFN 498  human
ADK26654      419 LTKEIISEVQRMtGNDVCCDCGAQDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFN 498  Zonotrichia a...
NP_001038672  419 LTKAILGEVKRMaGNDVCCDCGAPGPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTSELLLAKNVGNAGFN 498  zebrafish
Feature 1                                #                   
1DCQ_A         83 EIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHA 125  house mouse
NP_001084911  499 EVMEACLPADDSLKPTPCSDMNARKDYITTKYIERKYARRKYH 541  African clawed frog
NP_003878     499 EIMECCLPAEDSVKPNPGSDMNARKDYITAKYIERRYARKKHA 541  human
ADK26654      499 EIMEFCLPVDEVVKPNPSSDMNARKDYITAKYIERKYARKKHA 541  Zonotrichia albicollis
NP_001038672  499 EIMEACLTAEDVIKPNPASDMQARKDFIMAKYTEKRFARKKCP 541  zebrafish

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