Conserved Protein Domain Family
DUF4407
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pfam14362: DUF4407 (this model, PSSM-Id:316850 is obsolete and has been replaced by 464151)
Domain of unknown function (DUF4407)
This family of proteins is found in bacteria. Proteins in this family are typically between 366 and 597 amino acids in length. There is a single completely conserved residue R that may be functionally important.
Links
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Statistics
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PSSM-Id: 316850
Aligned: 81 rows
Threshold Bit Score: 113.098
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q3B2I0        20 EIIEKYP-T-EHSK-YTGIGATIFFTALFAALSGGYALFFVFSGN-PLgslW-ALLFGVVWGLAIFNLDRYIV------- 87  Chlorobium lute...
WP_013687187  34 ELIEVCT-V-DRNR-YKILGSAMLFTWLYATLAWGYFWSTNSDSP-FL---F--VSLGIFMGGFVLSIDRVLV------- 97  Fluviicola taff...
WP_013871617  11 dpahvtvfT-DRAR-YTCAALFMALYYVYATAGCTFFLMIATGGG-IF---P-GVLVGLLVAAAVVVYDRFLL------- 76  Frankia symbion...
WP_013443873  17 DILKNCSeA-SYKA-LKKYASSILILLFIWGATGYTFAQRYLSVHtWW---G-CALTALIFMIIVIQIERQVI------- 83  Paludibacter pr...
WP_014447466  16 nprsvtthS-DRVL-YRSIGVFIILYFGYATAGGAAFIDASTGYA-HP---WyQWVVGPLVAIGVVAYDRTVVgrvavny 89  Actinoplanes mi...
WP_014222321  18 gIVRTSS-E-VSSKaVKKYTSAMLIVCILWSFVGFMFTQRYLRGN-IW---G-SVAGSALMVVIIVQIERQII------- 83  Niastella koree...
WP_015753220  18 YLLKNSS-E-ASAKsVKKYLSAILIISILWAFIGYSFAKRYLKTD-DV---V-SIIVALIMVIVVIQIERQII------- 83  Robiginitalea b...
WP_008505780  18 rILQGCS-EvAHRA-VKRYTAALIIICTLWGFIGYTFVGKYLKGE-WH---M-SLFGGALFVLIILQVERQII------- 83  Mucilaginibacte...
WP_044046380  18 QILGGCTeA-SRKQ-LKKYSSAILILVILWSFIGYSFAERYVGAP-IW---G-RILTAFIFVVIIVQIERQII------- 83  Niabella soli
WP_014694582  16 nprsvtThS-DRVL-YRSIGVFILLYAVYATLGGAAFIDAGSGYR-HPw--F-QWLVGPLVAIGVVAYDRAVV------- 82  Actinoplanes sp...

Q3B2I0        88 ----SSIkkt-----------skGLRQFYQASPRLVFAVLIAIVIARPLELKIFDKEI-RARLEEKYLAAERAQIAGV-Q 150 Chlorobium lute...
WP_013687187  98 ----SSIn--------------kKRTNIVAIALRVVMALCIGAFLAQPIILFIFSSDI-DREVPILLDKKLAEKKIEV-E 157 Fluviicola taff...
WP_013871617  77 ----SQVsvdfsdlh-eedarphGRPRIGSYAIRVVITLLIAVIVTDPLVLKMFDSEI-TAELGRRHTDRTATLNAVV-E 149 Frankia symbion...
WP_013443873  84 ----LTVg-----------------kNKWIVRFRTLLAILMALIGSTILDQIIFKNDV-EKVLVDIRADKINEISGK--- 138 Paludibacter pr...
WP_014447466  90 erldSADprh-----------llRPPTPGLYLGRVGLALLFAVVVTEPLMLARYRGEI-DARLAEVHSGQISALDANGpA 157 Actinoplanes mi...
WP_014222321  84 ----LSLa-----------------RNRWLYISRGILAALMAILGTIIIDQIIFKEDI-ELEKITFIQKR-------V-D 133 Niastella koree...
WP_015753220  84 ----LNIsq-----------------sIWPKLFRGLIAIVMAIIGSVIIDQIVFKEDV-EKI-------KIAEIQSQV-D 133 Robiginitalea b...
WP_008505780  84 ----LSDpgg-----------kaK------YWVRGSIAFIMAIIGSIIIDQYIFREDIaHKELFE--------LNAQV-D 133 Mucilaginibacte...
WP_044046380  84 ----LTV-----------------GRSKWLSWFRVAIAFIMAILGSSILDQIIFKDDI-QKKMIQIVDRQVNEQ------ 135 Niabella soli
WP_014694582  83 ----GRVpisfdqldstdpehllRRPHLGLYLGRIALALLFALLVTEPLMLARYRGEI-DARLAETHSAQLGRLDAGG-A 156 Actinoplanes sp...

Q3B2I0       151 DA-FMAKYGMEAGQLQRFQGEYDALSRDVDRLREELKLEVFGRS----------SST-TS----GVPG--YGT---YAKN 209 Chlorobium lute...
WP_013687187 158 QV-YQSRKDELLANKKKLDDELKEKSELAIEKQNDYLKEIDG-------------TG-GS----GKFG--IAG---IAKA 213 Fluviicola taff...
WP_013871617 150 QV-RSAQLAALDDEIKNDQNQLEAASTAVGKAFTAVTDEREGR-------------G-AT----GLAG--NGP---VFKL 205 Frankia symbion...
WP_013443873 139 ------RQKTMQLEINKLNMIIDSLDVINSKLNDEVAKRPTIAV----------TNV-TTeknpVVNQ--DGTkttNTKT 199 Paludibacter pr...
WP_014447466 158 AG-FTTALAALREDTAREDAEVRALTGRAEVKRDDARLLYRQALad------saGRG-VT----RSPGcpPGG---YCHH 222 Actinoplanes mi...
WP_014222321 134 QG-LPPKTQELNTQIASIDTAILKKEADRSQLIDEVTKTPYIKT----------TST-QS----SPIK--KQT---TIKD 192 Niastella koree...
WP_015753220 134 EV-VPARTRIIQQQIFDLDSLITVKENALATTQQEFAEKPQ------------------------IRS--VLV---ETRE 183 Robiginitalea b...
WP_008505780 134 SL-MPSKQAELKRQINEADSGLAKKERERTTLITELTRNPFIKV----------VTRqDV----PVPI--STV---VVDS 193 Mucilaginibacte...
WP_044046380 136 ---LSGRLTIIDKKLGELQVEIDSLDKKNLILYEEIS------------------------------------------- 169 Niabella soli
WP_014694582 157 VAdYRARLTELRSDTENDDAAVRALADRAAGKRRDARDTYRQALadsagsgvthSPG-CP----R------KG---FCDH 222 Actinoplanes sp...

Q3B2I0       210 -------KEDVVQAKQQRLA--------------F-----------LA-------------VQv---------------- 228 Chlorobium lute...
WP_013687187 214 -------KQNGYMIAKDNLD--------------K-----------MQ-------------KD----------------- 231 Fluviicola taff...
WP_013871617 206 -------LNDNYAKAVARQN--------------E-----------AA-------------ET----------------- 223 Frankia symbion...
WP_013443873 200 -------IVSTQHVANTRIE--------------Q-----------IK--------------S----------------- 216 Paludibacter pr...
WP_014447466 223 -----------LVQRSRRLD--------------DqaaaldrqaaaLQ-------------RD----------------- 247 Actinoplanes mi...
WP_014222321 193 -------SSGKIITTEQVVNstsvsvttvpnpkfT-----------LI-------------AT----------------- 224 Niastella koree...
WP_015753220 184 -------ELVQEEDSSGQLQ--------------D-----------VK-------------IQ----------------- 201 Robiginitalea b...
WP_008505780 194 -------NKRSITRTNQVLK--------------T-----------ANivnsipnpkssmvNS----------------- 224 Mucilaginibacte...
WP_044046380 170 -------KQPTIKTVSQTIT--------------K-----------IQ-------------FRqgdgsfttrpqttistt 204 Niabella soli
WP_014694582 223 lvhrsrsLDEQAAALDRQAA--------------G-----------LQ-------------RD----------------- 247 Actinoplanes sp...

Q3B2I0       229 -----------iR-------------------LEEYLDSRKQAEGLNSQMMLSEGEFAR-KASTAGFADRNWALGELAHS 277 Chlorobium lute...
WP_013687187 232 ------------S-------------------KTELEKITKELDEINAKVTKSVSDFEKtLDGK-GFLIKKEALQSLFDK 279 Fluviicola taff...
WP_013871617 224 ------------L-------------------ATAQSNRSANIERINGDASRQTAENNDsAPPPAGVLDHQDALLAVLRH 272 Frankia symbion...
WP_013443873 217 ------------N-------------------TATIDKCRSRLDELYNQKINVEVTVRKeLEANAGFLEELKAMIVLISS 265 Paludibacter pr...
WP_014447466 248 ------------Q-------------------SAARVARAAEQSRLTELIRSEHAANTAvVRGDSGFGARTAAMWHLITA 296 Actinoplanes mi...
WP_014222321 225 ------------L-------------------DQTISNLRTDKSKKDSALLNIRPELEKqISSKIGFLDELEIMCKLITG 273 Niastella koree...
WP_015753220 202 ------------LkdykthlisnpigaqipvlDEQIQEHRRMRMAKEDEIVNIRAQTEKeLSEKTGLLDEITILFKIILS 269 Robiginitalea b...
WP_008505780 225 ------------I-------------------DQQIKDMGAIKALLEERLIRLRSDVEReAKTNRGFLQELQVMQKILNE 273 Mucilaginibacte...
WP_044046380 205 pipnpkvketeiN-------------------EQNLEVFRKQKEDYTQKKIKAEASLRQeLKSKQGFLEELNAIIEILRE 265 Niabella soli
WP_014694582 248 ------------Q-------------------RPERAARAAEQSRLTALLDAERTANADaVRGDAGFGARTAAMWHLVRA 296 Actinoplanes sp...

Q3B2I0       278 G-DdasrSSANAIAFITMLFIALECAPLIVKLLSDAGPSDVDVSETE 323 Chlorobium luteolum DSM 273
WP_013687187 280 D-Kt--hGLQNQYYLLMVILTLFELIPIISKLFMSSGAYDTKVALRE 323 Fluviicola taffensis
WP_013871617 273 N-L----HALLVCVMISLLLIALDLAVLFIKLAGRNSAYEISVAAAs 314 Frankia symbiont of Datisca glomerata
WP_013443873 266 E-A----LAGVFYFLLFTFILALELLVVVSKTKDVTCDYDLVVEHQL 307 Paludibacter propionicigenes
WP_014447466 297 DfW----GIGVFYFGIALLLVALDCAAIALKFVSRGNAYeraearaa 339 Actinoplanes missouriensis
WP_014222321 274 S-G----VAFFVWIIWFLFLMWLEMLVLISKLTDAKSDYEETIKHQm 315 Niastella koreensis
WP_015753220 270 S-W----IAGVVWGCIFLFFLSIELFVLISKSFESDSDYDRLVRHQk 311 Robiginitalea biformata
WP_008505780 274 S-G----PALVIWLLWFFLLLGLEVFILVNKIANAETDYDVTIQHHm 315 Mucilaginibacter paludis
WP_044046380 266 R-S----VALFFYSILFFFLMFLELFVVASKTKDTKSDYDLVVEHQL 307 Niabella soli
WP_014694582 297 D-Fw---GVGVYYLGIALLMVALDCAAIGLKFASRGNAYERNEARag 339 Actinoplanes sp. SE50/110
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