Conserved Protein Domain Family
IFT46_B_C
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pfam12317: IFT46_B_C (this model, PSSM-Id:315077 is obsolete and has been replaced by 463532)
Intraflagellar transport complex B protein 46 C terminal
This family of proteins is found in eukaryotes. Proteins in this family are typically between 298 and 416 amino acids in length. IFT46 is a flagellar protein of complex B. Like all IFT proteins, it is required for transport of IFT particles into the flagella.
Links
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Statistics
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PSSM-Id: 315077
Aligned: 49 rows
Threshold Bit Score: 240.166
Created: 27-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
A0E9L0         75 NPNDYSNLQVGAEVKQLFEYIARYKAPQMVLDAKLKPFIPDYVPAIGEVDAFIKMPRP-------------DGQP-E--- 137  Paramecium te...
XP_008198714  107 DPKEYENLDVSPEIKDIFQYITKYIPQQMGLDHKFKPFVPEFLPAVGDIDAFLKVLPPktll------sdaDFVAnQ--- 177  red flour beetle
EHJ68444     2114 DPKAYADLKVPPELDNV------YTPQKIDIDFKLHPFIPEYVPAVGDADAFLKVTTPasglr---gkalaDNAL-Dfid 2183 monarch butte...
ETN60741      117 NPKLYENIDAPAEVKDLFQYIPRYTPQRIAIDYKLKIFIPDFIPAVGDIDAFLKVFSPspvnek--nikklNTHI-Q--- 190  Anopheles dar...
XP_002003677  165 TPDKWEQLPLQPELKELFPYILKYTPQTIDTPYHLQPFVPEFVPAVGDVDAMLKVQAPallqpqaprqrelDEQL-Q--- 240  Drosophila mo...
XP_001853252   39 NPKFYDNIEAPSEVKDLFQYITRFSPQRVTIDYKLKIFVPDFIPSVGDIDAFLKICSPpfined--nkkilTEQI-K--- 112  southern hous...
XP_016025422  191 SPEKWEDLSVPGELKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPpllqpq--rqkelNDHL-G--- 264  Drosophila si...
XP_001961627  190 TPDKWEDLSLPGELKELFPYILKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPpllqpq--rqrelDDHL-E--- 263  Drosophila an...
XP_002014683  186 TPDKWEQLPLQQDLKDIFPYILKYTPQTIETPYHLQPFIPEFVPAVGDVDALLKVQAPpllqpq--rqrelDEHL-E--- 259  Drosophila pe...
XP_001988532  176 TPDKWEQLPLQAELKEIFPYILKYTPQGIETPYHLQPFIPEYVPAVGDVDAMLKVQPPallqpq--rqrelDEQL-Q--- 249  Drosophila gr...

A0E9L0        138 TLGLVTLDEPALNQSKKAKLDLLMREYVKVANRG-KN-TTIHAIE-NA--D-KNPKEITAWINDVAEIHKkk--qPPSVS 209  Paramecium te...
XP_008198714  178 QLGLVVLDEPAANQSDPALLHLQLRAESVKTTND-ST-VVVKKID-NV--E-KNAKIIDKWIKDISALHKsk--sFPAVR 249  red flour beetle
EHJ68444     2184 NLGLTVLDEPSADQSDAALLHLQLRAISKTTSAK-ST-VMTRKLE-NA--E-NNPQALDRWIRDVSALHAgr--sRATVA 2255 monarch butte...
ETN60741      191 NLGLMILDEPCGDQSDSVLLQMKLRSIFTKPIET-PS-AIVRS-----------SRDIDRWITEIQALRTsqsvqGAASA 257  Anopheles dar...
XP_002003677  241 RLGLELLDEPSGAQSEPSLLNMKLRSVLSGSRAG-NSrHAARSAT-QVptA-KTAKDIEKWIAEVEQVHM-----TQSMY 312  Drosophila mo...
XP_001853252  113 KLGLETLDEPCGEQSDRVLLQMKMRSIFTKP-LEtPS-AIA-----------KSTKDIDRWITEIQSLKAnq--sAQNVN 177  southern hous...
XP_016025422  265 KLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGRnPR-HAS-SASlVP--TaRSGKDIEKWITEVEQVHM-----TQSMY 335  Drosophila si...
XP_001961627  264 KLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSRGRnPR-HAS-SASqIP--TaRSGKDIDKWIAEVEQVHM-----TQSMY 334  Drosophila an...
XP_002014683  260 RLGLWLLDEPSGTQSEPSLLNMKLRSVLSGSRGRnPR-HAS-SAAlVP--TaRSAKDIDKWIGEVEQVHM-----TQSLY 330  Drosophila pe...
XP_001988532  250 RLGLMLLDEPSGAQSEPSLLNMKLRSVLSGNRGGnPR-NASYSATlVP--TaKSAKDIEKWIGEVEQVHM-----TQSMF 321  Drosophila gr...

A0E9L0        210 YSKIMPDIEELMQVWPQEIEDLFQSTQLPGD-----NIDMGLQEYCQFSCNLLDI--PV-----HtinnnRNIIESLHVL 277  Paramecium te...
XP_008198714  250 YTEPMPDLDELMQEWPESMEKQLSENGFPEP-----KGN--LSDYVQEVCGLFQI--PV-----------KNKIQALHLL 309  red flour beetle
EHJ68444     2256 YTRKMPDIDDLMAEWPDAIEDTLNEVGVPPA-----SVDCSLSQYVDIVCAVFDI--PV-----Hgd-tvNDRIQALHLL 2322 monarch butte...
ETN60741      258 QKQPNINIDNLMSEWPEEVERTLDTVGFPPA-----NLDCSLTEYIKIICNIFDI--PLpsdesQ-----ADYIYALYNL 325  Anopheles dar...
XP_002003677  313 DAQPRKDIDALLENWPRSFGTPASKEAVDEAyraclQQQISLVDYVRTLCEHFGVegPL-----Et---qSDYIHNIQTL 384  Drosophila mo...
XP_001853252  178 ALKSMINIDNLMSEWPEEVEKLLDTFGFPSA-----NLDCSLIKYIEIVCNIFDI--PV-----NrnngqAGYIQALYNL 245  southern hous...
XP_016025422  336 DAQPRKDIDVLLEDWPRSFGDEETINALDQAyrsclQQNISVAGYVGVLCERFGVegPL-----Es---qADYIHNVHTL 407  Drosophila si...
XP_001961627  335 DAQPRKDIDALLEDWPRAFGEAETKSALDQAyksclQQDISLADYVRVLCERFGVegPL-----Es---qADYIHNVQTL 406  Drosophila an...
XP_002014683  331 DAQPRKDIDALLEDWPRSYADAETKDALDQAyrsclQQHLPLADYVRVLCERFGIegPL-----Ds---qADYIHNVQTL 402  Drosophila pe...
XP_001988532  322 DSQPRKDIDALVEDWPRSFAMATTKNALDEAyrsclQQQISLADYVRVLCEHFGVdgPM-----Et---qSDYIHSIQTL 393  Drosophila gr...

A0E9L0        278 FTLFS 282  Paramecium tetraurelia
XP_008198714  310 FSLFa 314  red flour beetle
EHJ68444     2323 FSLYS 2327 monarch butterfly
ETN60741      326 FNLFL 330  Anopheles darlingi
XP_002003677  385 FALYL 389  Drosophila mojavensis
XP_001853252  246 FNLYL 250  southern house mosquito
XP_016025422  408 FALYL 412  Drosophila simulans
XP_001961627  407 FALYL 411  Drosophila ananassae
XP_002014683  403 FALYL 407  Drosophila persimilis
XP_001988532  394 FALYL 398  Drosophila grimshawi
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