Conserved Protein Domain Family
CHD5

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pfam04420: CHD5 (this model, PSSM-Id:309528 is obsolete and has been replaced by 427938)
CHD5-like protein
Members of this family are probably coiled-coil proteins that are similar to the CHD5 (Congenital heart disease 5) protein. In Saccharomyces cerevisiae this protein localizes to the ER and is thought to play a homeostatic role.
Statistics
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PSSM-Id: 309528
Aligned: 112 rows
Threshold Bit Score: 114.187
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
A8N7T9         6 TVFLIVFVTQ----LISWIGQNVLLEWAYNlyLRLSRns----laARQRSLKTEILNNKTELLKTSAQDQFAKWAK---- 73  Coprinopsis cin...
XP_002599083  12 aVYLFGLAKK----LTPAAAKLVLSYLQRe--------------tEGVRQLKEELQRLTMEQGSVSIKDEFPRHAR---- 69  Florida lancelet
EFX73325       6 mIAVFILIGS----LLPSIVKWGTHFVFkv--------------sDEEKKIREEFRGLRKELTGISAVDEFARYAR---- 63  common water flea
XP_001624350   9 TVFCFVYVL-----LMRTVFKSLLAASSWI---PKLLnk----ptSGEQTSIDELKSMKAEQAIISPQDEFARFVR---- 72  starlet sea ane...
XP_002062310   2 TLFVLIAIMS----LLNTFLPDFIRNYLK---VSRFWrl----rnEETEILQTELDAAREEVENVRNAEHAGEYAKtiki 70  Drosophila will...
XP_008984947  17 FVFGCNVLRI----LLPSFSSFMSRMLqk--------------daEQESQMRAEIQDMKQELSTVNMMDEFARYAR---- 74  white-tufted-ea...
NP_001006892  14 AVFLCNLCKI----LLPSFSSLVSRLLqe--------------daEQEYEMRSDIQTMRQELSNISMMDEFAKYAR---- 71  western clawed ...
ACQ58500      13 SVFLCNLMKS----LLPTISSFLTKMVqk--------------daEQESEMRTEVHEMKKEQASISMMDEFARYAR---- 70  sablefish
XP_003730057   8 FVLIYVAIVHtyrlYIPAISKLILKKLkl--------------vsAQNEDKRKALQDLLDQQSEIDMKEEFAKYAK---- 69  purple sea urchin
XP_001956886   2 tLFALIALLS----LLNTILPDFIRNYL------KVSrlwgsknsKEIQRLQAEVTTAREEVEVVRNAEHSGEYARtiqi 71  Drosophila anan...
A8N7T9        74 --LRRSVDKGLAELEKLNSEIATAKSSFSTKFNAVIWALTSGVNLVIGWWYGRKAVFYL--PEG-WMGPL-TWWFSFPFA 147 Coprinopsis cin...
XP_002599083  70 --LQRKISKIRDQIKQTGRDKSTLAIKVTWAISAVFYICYGLLMMSLMWRYRQEPVLLL--PAD-WL-YPlGGLVAFPSG 143 Florida lancelet
EFX73325      64 --IQRKMNKLDEQIQSLGQSRMDGRESVRWKLTKAIQVVNGAVLVYLAVTQRYEPVLTG--LTD-WF-WPlNLLLSYPTG 137 common water flea
XP_001624350  73 --LKRKIDKVSEDLIEKAKSRNEKIGKQQRSLKGIFLMCLFAVHIVFLVTYRKTPIVQL--PEP-WF-SPlHSIISFPTG 146 starlet sea ane...
XP_002062310  71 mrAERKVNEIELKIKTAQQLETLKKSTIDTISYYVSKLVMTLILIIISVRNRTSPVMIL--DKQ-INLWPlEDLLSFPTG 147 Drosophila will...
XP_008984947  75 --LERKINKMTDKLKTHVKARTAQLAKIKWVISVAFYVLQAALMISLIWKYYSVPVAVV--PSKwITPLD--RLVAFPTR 148 white-tufted-ea...
NP_001006892  72 --LERKINKMTDKLKTHVKSRTAQLSKIKWVISIVFYVLQAALMVSLIWKYYSEPVTVL--PSKwIAPLE--RLVAFPTG 145 western clawed ...
ACQ58500      71 --LERKINKMTDKLKTHVKSRTAQQAKMKWVVNIVFYILQAAVMISLIWKYYSDPVTVV--PSKwIAPVE--RLVAFPTG 144 sablefish
XP_003730057  70 --IERKIIKLKEELKSLKKSQVATRFTVSWGITLALNTIYSVFMIGLIWSYRYEPVILL--EEEwAWPFG--RILAFPCG 143 purple sea urchin
XP_001956886  72 mrAERKVQEAEANLKSARGMENLLKMGIDTTAFYVSKVLLFIITFIVSVRNRGTPVMIIdeAIS-LAPFT--GLLSFPTG 148 Drosophila anan...
A8N7T9       148 PRGSVSVGVWSFACK 162 Coprinopsis cinerea okayama7#130
XP_002599083 144 VSGAVGITFWLVVCN 158 Florida lancelet
EFX73325     138 IEGALSIVFWLFICN 152 common water flea
XP_001624350 147 TIGAIGLPFWMVTCN 161 starlet sea anemone
XP_002062310 148 IDHAVSVPIWAFSCN 162 Drosophila willistoni
XP_008984947 149 VAGGVGITCWILVCN 163 white-tufted-ear marmoset
NP_001006892 146 IAGGVGITCWLVVCN 160 western clawed frog
ACQ58500     145 VAGGVGITCWLVVCN 159 sablefish
XP_003730057 144 IPGAVGITAWLAVCS 158 purple sea urchin
XP_001956886 149 VANAISVPAWAFSCN 163 Drosophila ananassae
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