1QTS


Conserved Protein Domain Family
Alpha_adaptin_C
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pfam02296: Alpha_adaptin_C (this model, PSSM-Id:308101 is obsolete and has been replaced by 426707)
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Alpha adaptin AP2, C-terminal domain
Alpha adaptin is a hetero tetramer which regulates clathrin-bud formation. The carboxyl-terminal appendage of the alpha subunit regulates translocation of endocytic accessory proteins to the bud site.
Links
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Statistics
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PSSM-Id: 308101
Aligned: 20 rows
Threshold Bit Score: 126.295
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1QTS_A        134 FFQPTEMASQDFFQRWKQLsnPQQEVQNIFK----------AKHPMDTEITKAKI-IGFGSALlEEVDPNPANFVGAGII 202  house mouse
Q6CBH9        812 FMTASQVSTGDFQNRWNQL--ADKESRRIFKpq-------dISKSANPAHNLKVM-KGFGWSI-DAQQSTRDAIYGAGVL 880  Yarrowia lipo...
Q5KEF7        937 FAEGVHLESGPFFERWKIIggPPREAQQIFPik------ltANGMVDIGRNQRVI-TGNKLSVlPDIDHKPENIVFAGVL 1009 Cryptococcus ...
Q86KI1        872 FFEPLRLSSGDFFARWKTIsgKPLEIQEIFK----------STKPIDIQSYNRVIqEGLNITVlKQVDPNPNNIVASCLF 941  Dictyostelium...
Q9C0W7        759 FMKPTIFDSYDFFNHWGQMg-VEREAQLTFGln-------sKDRKLDAKRLTKIV-SGFHWGIcQNVDSIALNIVGAGII 829  Schizosacchar...
Q4W9N5        811 YMEPSTLSAEEFFKRWRQIggPPLEAQHTFGvt-------aKAKNVSETFTRRLV-EGFHWRIlENVDPNPNNIVGCAVY 882  Aspergillus f...
Q0UJD2        843 YQEGAELSAEDFFKRWKQIggAPREAQRIFGlv-------nKNRTMNSDFVKKVV-AGFKWGIvDGVDPNGKNIVGATVL 914  Parastagonosp...
XP_956726     839 FMDQAELSADDFFKRWKQIggAPREAQRIFGlsg----pkdGEREITESFIRQVL-EGFRWGLlYNVDPNSKNFVGASVV 913  Neurospora cr...
Q2GV39        822 FMDPAELSAEDFFKRWKQIggAPREAQHIFGlaatgggsraGEREITEGFVRTVV-EGFRWGVlNGVDPNGKNLVGASVV 900  Chaetomium gl...
XP_001537444  812 YMDESTLSPDDFFKRWRQIggPPLEAQSTFAvq-------gKGRMITESFTRGIV-QGFRFRIlGGVDPNSKNVVGCAVY 883  Ajellomyces c...

1QTS_A        203 HTKTT-Q---IGCLLRLEPNlQaqmYRLTLRTSKDTVSQRLCEL 242  house mouse
Q6CBH9        881 YTSVSgNfglLGCLQKLQGN-Q---FSITIRGTNAVLPAIVGKC 920  Yarrowia lipolytica
Q5KEF7       1010 HMSSAgK---VGILGRVEPNkDaklCRLTVRSTNEHVSAEILSl 1050 Cryptococcus neoformans
Q86KI1        942 PFGSNgQp--INSYIRIETNpQanmCRLTIRSQSATLTNTIKNL 983  Dictyostelium discoideum
Q9C0W7        830 RFG-TqN---VGCLLRIEPNyEqnlIRLSIRSTNTSIANTLAKE 869  Schizosaccharomyces pombe 972h-
Q4W9N5        883 QSH-GgK---TGCLLRLEPNyErkmFRVTIRATQEAVPQALAKq 922  Aspergillus fumigatus
Q0UJD2        915 HTSEGgK---FGCLMRLEPNfDtqmYRITIRATDEAVPPVLIKA 955  Parastagonospora nodorum SN15
XP_956726     914 HTSEGgK---FGCLMRLEPNyGtqmVRLTIRATDETVPPVLLKM 954  Neurospora crassa OR74A
Q2GV39        901 HTSEGgK---YGCLLRLEPNyQtqmVRLTIRATEDALPPLLLKM 941  Chaetomium globosum CBS 148.51
XP_001537444  884 QM-DGgK---TGCLLRLEPNyEkkmYRITIRATQDAVPQALVKL 923  Ajellomyces capsulatus NAm1
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