1IVZ,2E7V


Conserved Protein Domain Family
SEA

?
pfam01390: SEA (this model, PSSM-Id:307516 is obsolete and has been replaced by 460188)
Click on image for an interactive view with Cn3D
SEA domain
Domain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side chains. Recently a proteolytic activity has been shown for a SEA domain.
Statistics
?
PSSM-Id: 307516
Aligned: 232 rows
Threshold Bit Score: 34.9329
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1IVZ_A        12 QHFNLNFTITNLPYSQDIAQPSTTKYQQTKRSIENALNQLFRnSS-IksYFSDCQVLAFR--SvsnNNnhTGVDSLCNFS 88  house mouse
XP_003415991  74 HSYYSTLSFTSNRLYDEFGRETSKNFTEMSKKIESMVKNAFCkSS-LreEFVKSQVIRFS--Q---EDhgVLAHMLLIFR 147 African savanna...
XP_017203011  50 HHYYSTLLFTSDKVYGDFGKEASKNFTEMSQRIESMVKNAFHkSP-LrgEFVKSHIIKYS--Q---EEdgVLAHMLLIFR 123 rabbit
XP_006916589  74 YNYYSTLSFSSDELYGDFGREASKNFTEMSQKIESMVKNAFYkSP-LreEFVKSHIIRFS--K---EEngVLAHMLLIFR 147 black flying fox
EDL89831      50 YNYYSTLPFTSDKLYSEFGKEASKNFTEMSQRIETMVKNAFHkSP-LrgQLSKAHIIKFS--K---EDdgVLAHMLLIFR 123 Norway rat
ELV12170      65 YNYYTTLSFTSEKLYKDFGREASKNFTEMSRRIELMVKNAFHkSR-LreDFVKSQVIKFS--Q---EEnrVLAHMLLICR 138 Chinese tree shrew
XP_003429790  48 YNYISTLKFSSHQRYPDFGKEGTQNYTKMSQAIETLVSKAFLsSS-LrrQYVKSQVIQFS--S---AEagVMAHMLMDFR 121 platypus
XP_003310415  51 YNYYSTLSFTTDKLYAEFGREASNNFTEMSQRLESMVKNAFHkSP-LreEFVKSQVIKFS--Q---QKhgVLAHMLLICR 124 chimpanzee
EHB03014      51 YNYYSMLPFTSDKVYDEFGREGSKNFTKMSQKIELMVKNTFNkYP-LkgELVKSHIIKFS--Q---EEhgLLAHMLLIFK 124 naked mole-rat
EGT43132      74 QSYSGSFTIP-QQASEIFDTKNTNTYFSIFNLIQNALDQIFV-TSsLr-pYAAQAI--LTdlQ---NR---GNDLTVLFR 142 Caenorhabditis ...
1IVZ_A        89 Pl---ARRVDRVAIYEEF---LrmTHNGTQLLNFTLD 119 house mouse
XP_003415991 148 FrsteDPENISKNIQRVL---H--EKLQNAVGHPKVD 179 African savanna elephant
XP_017203011 124 FrsteDTENINKIIQRIL---N--EKLQDATGPPKLD 155 rabbit
XP_006916589 148 FrsteDPETINKNIQRVL---H--EKLQDAVGPLKLy 179 black flying fox
EDL89831     124 IrsteDPEVVHKIIEYVL---R--EKLKYATGPPKVD 155 Norway rat
ELV12170     139 FrsteDPETINRIIQRVL---P--QKLQDAVGPPKVD 170 Chinese tree shrew
XP_003429790 122 FpsttSPQAAKKIVTHVL---S--TKLKANTLTPKVD 153 platypus
XP_003310415 125 FhsteDPETVDKIVQLVL---H--EKLQDAVGPPKVD 156 chimpanzee
EHB03014     125 IrsteDPETINKIIQHVL---H--KKLKNAVGPPKVN 156 naked mole-rat
EGT43132     143 VnmfgGGNVDQNTIAGIIrsnL--NQLQNQIGENARI 177 Caenorhabditis brenneri
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap