2GJ3,1D06,4BBU,2W0N


Conserved Protein Domain Family
PAS

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pfam00989: PAS (this model, PSSM-Id:307226 is obsolete and has been replaced by 395786)
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PAS fold
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.
Statistics
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PSSM-Id: 307226
Aligned: 49 rows
Threshold Bit Score: 46.6407
Created: 13-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2GJ3_B    5 EIFRQTVEH---APIAISITD--LKANILYANRAFRTITGYGS-EEVLGKNESILSNGTTPR-LVYQALWGRLAQKKPWS 77   Azotobacter vinelandii
P37894  320 RRFRLAVEA---ARCGIWEWD--LNGDQVYLSDVTGAMFGWGGgGVVSGQDLLERISID-----HRERVRQALANAAMYG 389  Caulobacter crescen...
P15939  386 AYLAEAQHL---THTGSWSWDv-HTRDFVYRSAEVDRLFGFNP-QEPVSLETIRSRIHPEDLpGLQEVQRQAIDQEHERF 460  Bradyrhizobium diaz...
P23222   16 EHFRVRIEG---FGVGTWDLD--LKTWALDWSDTARTLLGIGQ-DQPASYDLFLSRLEPDD---RERVESAIKRVSERGG 86   Bradyrhizobium diaz...
P16497  267 ERYQLLIQN---SIDTIAVI---HNGKWVFMNESGISLFEAATyEDLIGKNIYDQLHPCDHE-DVKERIQNIAEQKTESE 339  Bacillus subtilis s...
P12348  339 YRVPEEIHS---QRSPKFAIRhtAAGIISHVDSAAVSALGYLP-QDLMGRSIMDLYHHDD----LPVIKEIYESVMKKGQ 410  Drosophila pseudoob...
P12349  207 QHVQQQQHDrvkEDSFCCVISm-HDGVVLFTTANLNEMLGYPR-EMWLGRSFIDFVHIKDRA-TFASQITTGIPIAESRC 283  Drosophila virilis
P05709  102 ELGSHLLQT---LDGFIFVVA--PDGKIMYISETASVHLGLSQ-VELTGNSIFEYIHNYDQD-EMNAILSLHPHINQHPL 174  fruit fly
P35869  113 QEGEFLLQA---LNGFVLVVT--TDALVFYASSTIQDYLGFQQ-SDVIHQSVYELIHTEDRA-EFQRQLHWALNPSQCTE 185  human
P27540  163 ELKHLILEA---ADGFLFIVSc-ETGRVVYVSDSVTPVLNQPQ-SEWFGSTLYDQVHPD-----DVDKLREQLSTSENAL 232  human
2GJ3_B   78 GVLVNRRK--------DKTLYLAELTVAPVLNEAGETI-YYLGMHRDT 116  Azotobacter vinelandii
P37894  390 AFDVSFRVpas---eqGARSLWIDARGQGFGKPGSEGHaRIIGVALDV 434  Caulobacter crescentus CB15
P15939  461 EYDFRVILp-------DGGIRRIHSVAHVVVGSDGNVS-ELIGTHMDV 500  Bradyrhizobium diazoefficiens USDA 110
P23222   87 GFDVSFRVag-----tSNAGQWIRARAGLIRDEAGTAR-HLSGIFLDI 128  Bradyrhizobium diazoefficiens USDA 110
P16497  340 IVKQSWFTf-------QNRVIYTEMVCIPTTFFGEA---AVQVILRDI 377  Bacillus subtilis subsp. subtilis str. 168
P12348  411 TAGASFCSkpyrfliqNGCYILLETEWSSFVNPWSRKL-EFVVGHHRV 457  Drosophila pseudoobscura pseudoobscura
P12349  284 SQSK------------DARTTFCVMLRRYRGLASG----GFGIIGRPV 315  Drosophila virilis
P05709  175 AQTHTPIGspn---gvQHPSAYDHDRGSHTIEIEK----TFFLRMKCV 215  fruit fly
P35869  186 SGQGIEEAtglpqtvvCYNPDQIPPENSPLMER------CFICRLRCL 227  human
P27540  233 TGRILDLK--------TGTVKKEGQQSSMRMCMGSRR--SFICRMRCG 270  human
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