Conserved Protein Domain Family
HPS3_C

?
pfam14763: HPS3_C (this model, PSSM-Id:291429 is obsolete and has been replaced by 464302)
Hermansky-Pudlak syndrome 3, C-terminal
This domain is downstream of the mid domain family, pfam14762, of these vertebrate proteins. This region carries a number of tyrosine sorting motifs and the second of two di-leucine sorting boxes as well as the ER membrane-retention signal KKPL.
Statistics
?
PSSM-Id: 291429
Aligned: 12 rows
Threshold Bit Score: 598.597
Created: 24-Jul-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q91VB4        651 NIDPLTALHYLRKLDSCGVSPVLVTLTKAAVALKMGDLDMYRNEMKSHSEMKLVYGFILEPRLLIQ-------Q------ 717  house mouse
NP_001092058  652 NIDPLTAISYLRKLDTSGLSSVLVTLTKAAMALKMGDLDMHRNEMKSHSEMKLVCGFILEPRLLIQ-------Q------ 718  pig
XP_007502120  658 NMDPLIAMKHLKKLNPAGMSSVLVALSKAAVALKIGDLNTYKKEMKCHTEMKLVCGFILEPRLLVQ-------Q------ 724  gray short-ta...
XP_002190442  659 NICPLTAVKYLQEVEKM-MPSVVLTLTKAFLALKMGNLTMYEHEMQSYKETTLACGFIGQPRLLQQ-------R------ 724  zebra finch
XP_422849     657 NVCPLTAVKYLRKVEDI-MPSVVLTLTKAFMALKMGDLMMYECEMNSHKETMLACGFVGQPKLLRE-------C------ 722  chicken
XP_006007913  675 DACPGIVMDYLQKLEDN-SPSIVLTLTKAAMALKMKNLQLYGKEMERHAEMMMVWGFIEEPRLLLH-------R------ 740  coelacanth
XP_005462165  677 NVSPARTLQILQNLENSVGVSVSLTITMATMMLRLGDLQQYTQLMERHAEMLLVYGFIEEPRLLLY-------Ggc---- 745  Nile tilapia
XP_011472512  682 NCSATRTLQILQRLEDTAGVSVPLTIIMAAMALRLGKQQDYTELMERHAEMQLVYGFIEEPRLLLH-------Ggggggg 754  Japanese medaka
XP_005805292  668 NVDPAATLQILQRLEETAGVSVPLTITMATMMLRLGNMAQYTELMERHAEMLLVYGFIEEPRLLLHtagggggG------ 741  southern plat...
XP_002937376  640 HVCPTKAMVYLQNLQ----PSALVSLIKANMARRMNDLDTCKNEIQHHSEMMLLCAFMDEPRLLMN-------H------ 702  western clawe...
XP_006637543  664 NASAAGAFALLDRLEA-AVPSVAVSLSKAAVALRMGSLQQYKQHMDRHAEMLQVYGFLEEPRLLLL-------R------ 729  spotted gar
XP_005161916  692 NADPDGAGALLEQLEASGAPSITLALCRASLALRTGDRHTYSQQMERHAEMLQVYGFIEEPRLLLH-------G------ 758  zebrafish
Q91VB4        718 -----W-KGQIVPTELAIDLKETQPGLLVASVLGLQKNDKIGIVETDSFFKVL-CGK--D--EDAVPQLLIDFWEAQLVA 786  house mouse
NP_001092058  719 -----R-KGQMVPTEFAVHLKETQPGLLVASVLGLQKNNKIAIEEADSFFKVL-CGK--D--EDTIPQLLVDFWEALLVA 787  pig
XP_007502120  725 -----K-KGQVVPTELAAHLKETQPELLVASILGLQKNNKIEVEEADAFFKVL-CGK--D--EDVIPQLLVDFWEAQLVA 793  gray short-ta...
XP_002190442  725 -----K-EGIVMPTEFAVHLKEMQPGLLVAATVALHENSKIELEEADTFFKML-CNS--S--ENTIPQLLVDFWEALLVV 793  zebra finch
XP_422849     723 -----K-EGIVIPTEFAVHLKAMQPGLLVAATVALHENSKIELEEADMFFKML-CNN--G--EDTVPQLLVDFWEALLVA 791  chicken
XP_006007913  741 -----T-DACIIPTEMALSLKENQSGLMVASVVALHENSKLKLDEADHFFSIL-CKE--S--EDECPQILVDFWEALLVA 809  coelacanth
XP_005462165  746 ---anQ-HGRVYPTALTRQMANSQPGLLVAAMVALHENSKVKLEDADHIFKELgCES--S--------LQVDFWEAMLMA 811  Nile tilapia
XP_011472512  755 gggggQ-HSQVHPTSLARQLANTQPGLLVAAMVALHENCKVQLEQADFVFKELgCEN----------TLLVDFWEAMLMA 823  Japanese medaka
XP_005805292  742 -----K-HPQVRPTALAAQLADSQPGLLVAAMVALHENNKVQLEPADHVFKELgCES--S--------LQVDFWEAMLMA 805  southern plat...
XP_002937376  703 -----K-GKEVIPTALAFYFKDTVPGLLVASLVALHENNKISLTEAELFFQAL-CEKmdD--EDNVPQMLVDFWEARLSA 773  western clawe...
XP_006637543  730 -----RaGGAVAPTELALWLRDTQEGLLVAAAVALHENGKVKLEEADAFFQEL-CKE--SrnEESGPQLLVDFWEALVVA 801  spotted gar
XP_005161916  759 -----R-GVGLMPTLLAQQLRDSQDGLLVAALVALHENSRISLEDAHLFFQEL-CKDrlep--dsspQLLVDFWESLLVA 829  zebrafish
Q91VB4        787 CLPNVVLEELFFKLISQYVWRLSERRC-----P-DTVPLRTAEDLINACSHYGLVNPWVHVLTTSDSLADKNYTDDLLKL 860  house mouse
NP_001092058  788 CLPDVVLQELFFKLTSQYIWRLSKKQP-----P-DTIPLRTSEDLINTCSHYGLINPWVNVLLSSDSLEDKNFMDDLSKL 861  pig
XP_007502120  794 SLPEIVLQNLFFKLLSQYIWRLSQRQS-----P-DTKPLRNPEDLINSCSHYGLIYPWVTFLTSPDSLHDQNYAEDLSKL 867  gray short-ta...
XP_002190442  794 SSQEKILQELLLRVTSQYVWRISKKQL-----P-ETKPLKTTEDLINSCSHFGLIVPWVTSIMSVGCLYDRDYHEDISRL 867  zebra finch
XP_422849     792 CSQEEVLPELLLRVTHQYVWRISKKQL-----P-ETKPLKTTEDLINSCDHFGFIFPWVTFIMSMESPLGKDCPEDISKL 865  chicken
XP_006007913  810 CPQEVVIQELLFKLAFLYIQRIIENHK-----P-KTKSLKTPEDLINSCTHYGLIFPWVNAVTSSGS--DDVCHEEVLKL 881  coelacanth
XP_005462165  812 SSNDAVIQELLFRLASVYIDRLTNTKSekhttP-KRKSLKSADDLINSCSHYGGLYPWLVLLSPTHIT-SSQHLEALHKL 889  Nile tilapia
XP_011472512  824 SSQDAVIQELLFRVASVYIDRLTNSINgs-gaP-KYKSLKGADDLITSCSHYGALYPWLTVLNPTHST-TSEHQEALHKL 900  Japanese medaka
XP_005805292  806 SSQDAVIQELVFRLASVYIDRLTAGES-----PtKHKSLKSVDDLISCCSHYGALYPWLTVLNPAQTS-SYQHQEALHKL 879  southern plat...
XP_002937376  774 YPPESVLQDILFKLTSYYVWRICRPHH-----L-CVKPLRSPEDLRNSCSHFGLISPWISKMVSKESALCNHCGEFL-KL 846  western clawe...
XP_006637543  802 SAQEAVIQDLLFRLASVYIDRVARRER-----C-STKPLKTAEDLISSCPHYGLLFPWVSIVAPARFDIAHDYQEDLQKL 875  spotted gar
XP_005161916  830 SSRESTIQELLFRLVSVYISRITCSHP-----S-GCKALKTADDLINSCSHYGMLYPWVSILTP---NlYHDQQEDLLKL 900  zebrafish
Q91VB4        861 QSLICSPSLDVASIIPFLEPLSEDTVAGLSTHALCHTRLQEYEQCIDTLLERCPEAVIAYANQELKED-HWILWWKKLLP 939  house mouse
NP_001092058  862 QSLICGPSFDIASIIPFLEPLSEDTVAGLSVHVLCYTRLKEYELCIDRLLERCPEAVIPYANHELKEE-NRTLWWKKLLP 940  pig
XP_007502120  868 QSLICGPSFDVASILPFLEPLSEDTSAGLSIHLLCLTRLKEHERAIDSLLDRCPEAVIPYAHHELKEEgHRALWWKKLLP 947  gray short-ta...
XP_002190442  868 QSLLCSQSINIASALPILEPLTEADSVGLTVRVLCNTRLGKYEEAIDQLLSRCPDAVVFYAQHELKGD-SQALWWNKLLP 946  zebra finch
XP_422849     866 QSVLCGQSIDITAALPILEPLADAGNVGLTIRVLCSTRLGKYEESIDQLLRQYPAAAVLYAQHELKGD-SQAVWWNKLLP 944  chicken
XP_006007913  882 QSLLCGPTLKVTSIVPFLEHLPEDGCAGLSIHVLCDTRLGEYEKSIDKLLDRCPEAVIPYANHELQQE--QALWWKKLLP 959  coelacanth
XP_005462165  890 QSLLCGPSLSVGSVVPLLERLSDETLWGFSLHLLCATRTGQYDRSIEKLLDRCPQAIIPYANHQLQEK-NMALWWQKLLP 968  Nile tilapia
XP_011472512  901 QSLLCGPSLSVGSIVPLLERLSGETLWGFSLHLLCATRRGQYESSIEQLLDRCPQAIIAYANHQLQDK-YMTLWWQKLLP 979  Japanese medaka
XP_005805292  880 QSLLCGPSLSIGNVAPLLESLSEETLWGFSLHLLCATRRGHYGSSIERLLDRCPQAIIAYANHQLQDK-HMALWWQKLLP 958  southern plat...
XP_002937376  847 QSLLSGPSMDVKLFLPFLKLIPEDSNSSLSIHILCATRLMQYEKSIDKLLDCCPEAIIAYAKHEVKEG-SQTIWWNKLLP 925  western clawe...
XP_006637543  876 QSLLCGPSLGGSSVLPLLEQLSDGEGAGLSVHLLCATKLGQHESCIDKLLDSCPEAIVAYAHQELQSE-KTVLWWQKLLP 954  spotted gar
XP_005161916  901 QSLLCGPTLQVSSILPLLEPLSDSDDPGLSVHVLCSTKLGQHEDSIHRLLDRCPQAIIPYAQHQLHHH-TLCLWWQKLFP 979  zebrafish
Q91VB4        940 ELCQRVKSGGERSHLHLSLLKETLSVIAVGLDLRDFLNVLPEDGAAAFFLPYLLFCSRKKS 1000 house mouse
NP_001092058  941 ELCQRIKRGGEKYQLYLSSLKETLSVVAVELELRDFLNVLPEDGTAAFFLPYLLYCSRKKS 1001 pig
XP_007502120  948 DLCQRLREGGEKYDVHLSSLKETLAVVAAELELRDFLNILPEDGTAAFFLPYLLYSSRKKS 1008 gray short-tailed opossum
XP_002190442  947 ELCKRTRLTGNDCPVLISSLKETLSIVAMELKLRDFLSLLPEDGTAAFFLPHLLHCSQRKL 1007 zebra finch
XP_422849     945 ELCERARLTRSDCPVLISSLKETLSVVATELELRDFLSLLPEDGTAAFFLPHLLHCSQRKL 1005 chicken
XP_006007913  960 ELCRRTSEATDESGVLVSSLKETLSVLAMKLEPLDLLNLFPEDGIAAFFLPHLLECSRKKL 1020 coelacanth
XP_005462165  969 ELCDRTRAA-ADNSILLAALKETLVVVAMEMSPAEFLELIPDDGTASYFLPHLLTCSQRQV 1028 Nile tilapia
XP_011472512  980 ELCKRTRAA-ADNGILLGALKETLVVVAMETSPAEFLELIPDDGTASYFLPHLLTCSQRHL 1039 Japanese medaka
XP_005805292  959 ELCNRTRAA-ADNGFLLGALTETLVVVAMETSPAEFLELLPDDGSASFFLPHLLTCGQKHL 1018 southern platyfish
XP_002937376  926 ELCNRIRSSQSNNEVFISSLKDTLEIMAMELDTKDFLNALPDDGTAAFFLPYLLNQSKKKL 986  western clawed frog
XP_006637543  955 ELCRRSRSCGAAGAVLLSALRETLQVVSRELGPLEFLQVLPSDGSAEFFLPYLLECSQRGS 1015 spotted gar
XP_005161916  980 EVCDRIRKTgNDNTILLSALKETLIVAARELTPLEFLDLLPDDGTAHFFLPHLLECCQ--- 1037 zebrafish
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap