Conserved Protein Domain Family
LRR_5

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pfam13306: LRR_5 (this model, PSSM-Id:290045 is obsolete and has been replaced by 463839)
Leucine rich repeats (6 copies)
This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.
Statistics
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PSSM-Id: 290045
Aligned: 165 rows
Threshold Bit Score: 63.7158
Created: 28-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q73M50        487 TTINQNVFIN-CnAIKSVSFP--KTLINVQPYAFRNCRE-LQAVEFAD-GGTQCYSTIFDQ-CkK-LSKITI---LGgV- 555  Treponema den...
XP_001313404   58 KEIQSYAFYQ-CtSISEIDLSvcTNLIIIGSYSFSGCTS-LNSIFLPS-NLIKLGDYCFSN-I-N-ATSISL---SE-S- 126  Trichomonas v...
XP_001329755   63 ETIQDYSFFQ-CkFLNNVDLSvcTKLIIIGKSVFERCSS-LTSIKLPN-SVTTLGDSIFYS-T-N-IKNFDL---PA-S- 131  Trichomonas v...
XP_001316471  563 RTLNPYSFYE-CtSLNLIELP--ESVNEISDYCFAGCSA-LNTIKIKS-NSVNLGMYTFSR-C-S-FTSFEI---NI-S- 629  Trichomonas v...
XP_001306978  114 TQIDASSFAN-T-AISQIYIK--IDNVAIPTAAFSGCIQ-LNHIVFSG-SVASISQFAFND-CsS-LTSLAIspsNS-S- 183  Trichomonas v...
XP_001315147  526 TLFDDDCFNYfG-NVNDVVFAv-YSLKYIGQKTFNGFKN-METLSFTKcNVIEIKEDAVSNhN-K-LNNMNF---DA-N- 595  Trichomonas v...
XP_001311382 1214 VAISKACFAN-CsKLNKIDLL---KYTEIPERAFEGCQN-LNNFDFIS-QVTKFGDYSFYN-S-G-IVELDV---IQ-S- 1279 Trichomonas v...
XP_001584519  624 TTIEMDCFKN-A-RMISLTLP--ESLQTIETGAFYNCKYwNSSLILPV-NLSEIGDSTFSN-C-ElIEEISI---PS-N- 691  Trichomonas v...
XP_001316473  632 KVIDNNCFCGfS-KLQSIEIK--NDLTSINDNAFCNCTN-LASVSFPN-TLRSIGSGAFKL-CgK-ITQLKF----E-N- 698  Trichomonas v...
XP_001298988    7 EEIPYGCFAN-S-TLKYIELP--NTLYRVCSYAFDYT-Q-IEIFDPYV-NLKYIEPYGLSN-CyN-LTIANL---SQ-Ti 73   Trichomonas v...
Q73M50        556 VKSNFYYAFSSSSQlhISEIVLC--EGVTKIEGYAFNNfS-EITEITIPA--TVTDIDTNAFANCTSLK 619  Treponema denticola
XP_001313404  127 ITSMPPSCFRGSKY--LISVEIPlsSNITSLSSHFIAE-T-PVTKYTITD--KVNYISNSAFSYS-NIV 188  Trichomonas vaginalis G3
XP_001329755  132 VTVLPFQCFMGCKQ--LNSINIPqdSNLTEIKKWFIRQ-S-SLKTFRIPA--KVETFSDGVFEDS-SIE 193  Trichomonas vaginalis G3
XP_001316471  630 INKLRSYCFSGCNN--LISISIN--SDIQSVKSNAFSNiS-NLQTILIQG--NIATIEGNSFSLSPNLE 691  Trichomonas vaginalis G3
XP_001306978  184 KFTFEESAFEGCTN--LYSLHLP--TAVSTIEKNAFNG-CyNLVDLIIG---VPTEVQEYAFANC-GVT 243  Trichomonas vaginalis G3
XP_001315147  596 ELYLDVSCFRNIDS--LHQVTIS--SKIISFKDFSFADsT-SLNYINMMC--EKATFGNSIFENCSNLN 657  Trichomonas vaginalis G3
XP_001311382 1280 KSIFGEFSFS-KTN--LKKVLIS--SNHSDFGKSSFSFnK-NLKEFYYCG--DNTSVDNSVLEGSDNVK 1340 Trichomonas vaginalis G3
XP_001584519  692 CVIRGEKCFSNMTN--VKKVIFQ--SGIEVINNQEFVN-CtNLKEIVLPD--TLTTIKNCAFMNS-GLV 752  Trichomonas vaginalis G3
XP_001316473  699 IDSLEESAFEQCNG--LTKFEIS--GTFNTISKRLFKG-CiELKSAIFTDpgMITVIESESFMNCLNLN 762  Trichomonas vaginalis G3
XP_001298988   74 ITRLDQKAFYECPS--LKDMWMS--SKITTVLSRTFAN-T-DIAHIKIPK--QLTKLETEAFAYS-GFH 133  Trichomonas vaginalis G3
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