Conserved Protein Domain Family
IFT46_B_C
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pfam12317: IFT46_B_C (this model, PSSM-Id:289115 is obsolete and has been replaced by 463532)
Intraflagellar transport complex B protein 46 C terminal
This family of proteins is found in eukaryotes. Proteins in this family are typically between 298 and 416 amino acids in length. IFT46 is a flagellar protein of complex B. Like all IFT proteins, it is required for transport of IFT particles into the flagella.
Links
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Statistics
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PSSM-Id: 289115
Aligned: 51 rows
Threshold Bit Score: 244.391
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
A0E9L0         75 NPNDYSNLQVGAEVKQLFEYIARYKAPQMVLDAKLKPFIPDYVPAIGEVDAFIKMPRP--------------DGQP-E-- 137  Paramecium te...
EEZ97358      107 DPKEYENLDVSPEIKDIFQYITKYIPQQMGLDHKFKPFVPEFLPAVGDIDAFLKVLPPktll-------sdaDFVAnQ-- 177  red flour beetle
EHJ68444     2114 DPKAYADLKVPPELDNV------YTPQKIDIDFKLHPFIPEYVPAVGDADAFLKVTTPasglr----gkalaDNAL-Dfi 2182 monarch butte...
XP_001853252   39 NPKFYDNIEAPSEVKDLFQYITRFSPQRVTIDYKLKIFVPDFIPSVGDIDAFLKICSPpfined---nkkilTEQI-K-- 112  southern hous...
ETN60741      117 NPKLYENIDAPAEVKDLFQYIPRYTPQRIAIDYKLKIFIPDFIPAVGDIDAFLKVFSPspvnek---nikklNTHI-Q-- 190  Anopheles dar...
XP_001961627  190 TPDKWEDLSLPGELKELFPYILKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPpllqpq---rqrelDDHL-E-- 263  Drosophila an...
XP_001997667  176 TPDKWEQLPLQAELKEIFPYILKYTPQGIETPYHLQPFIPEYVPAVGDVDAMLKVQPPallqpq---rqrelDEQL-Q-- 249  Drosophila gr...
XP_002064519  173 TPDKWEQLPLPGDLKELFPYILKYTPQSIDTPYHLQPFIPEFVPAVGDVDAFLKVQAPaliqpqsqqsqrdlDEHL-Q-- 249  Drosophila wi...
XP_002014683  186 TPDKWEQLPLQQDLKDIFPYILKYTPQTIETPYHLQPFIPEFVPAVGDVDALLKVQAPpllqpq---rqrelDEHL-E-- 259  Drosophila pe...
XP_002079804  192 sPEKWEDLSVPGELKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQAPpllqpq---rqkelNDHL-G-- 265  Drosophila si...

A0E9L0        138 -TLGLVTLDEPALNQSKKAKLDLLMREYVKVANRG---K--NTTIHAIE--NADKNPKEITAWINDVAEIHKkk--qPPS 207  Paramecium te...
EEZ97358      178 -QLGLVVLDEPAANQSDPALLHLQLRAESVKTTND---S--TVVVKKID--NVEKNAKIIDKWIKDISALHKsk--sFPA 247  red flour beetle
EHJ68444     2183 dNLGLTVLDEPSADQSDAALLHLQLRAISKTTSAK---S--TVMTRKLE--NAENNPQALDRWIRDVSALHAgr--sRAT 2253 monarch butte...
XP_001853252  113 -KLGLETLDEPCGEQSDRVLLQMKMRSIFTKPLET---P--SAIAKS---------TKDIDRWITEIQSLKAnq--sAQN 175  southern hous...
ETN60741      191 -NLGLMILDEPCGDQSDSVLLQMKLRSIFTKPIET---P--SAIVRS---------SRDIDRWITEIQALRTsqsvqGAA 255  Anopheles dar...
XP_001961627  264 -KLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSRGR---N--PRHASSASqiPTARSGKDIDKWIAEVEQVHM-----TQS 332  Drosophila an...
XP_001997667  250 -RLGLMLLDEPSGAQSEPSLLNMKLRSVLSGNRGGnprN--ASYSATLV--PTAKSAKDIEKWIGEVEQVHM-----TQS 319  Drosophila gr...
XP_002064519  250 -RLGLWLLDEPSGAQSEPSLLNMKLRSVLSGNRGP---NprHASSASLV--PTARFAKDIDKWINEVEQVHM-----TQS 318  Drosophila wi...
XP_002014683  260 -RLGLWLLDEPSGTQSEPSLLNMKLRSVLSGSRGR---N--PRHASSAAlvPTARSAKDIDKWIGEVEQVHM-----TQS 328  Drosophila pe...
XP_002079804  266 -KLGLWLLDEPSGAQSEPSLLNMKLRSVLSGSMGR---NprHASSASLV--PTARSGKDIEKWITEVEQVHM-----TQS 334  Drosophila si...

A0E9L0        208 VSYSKIMPDIEELMQVWPQEIEDLFQSTQLPGD-----NIDMGLQEYCQFSCNLLDI--P--V-----HtinnnR----N 269  Paramecium te...
EEZ97358      248 VRYTEPMPDLDELMQEWPESMEKQLSENGFPEP-----KGN--LSDYVQEVCGLFQI--P--V-----------K----N 301  red flour beetle
EHJ68444     2254 VAYTRKMPDIDDLMAEWPDAIEDTLNEVGVPPA-----SVDCSLSQYVDIVCAVFDI--P--V-----H-----GdtvnD 2314 monarch butte...
XP_001853252  176 VNALKSMINIDNLMSEWPEEVEKLLDTFGFPSA-----NLDCSLIKYIEIVCNIFDI--P--V-----N-----R----N 232  southern hous...
ETN60741      256 SAQKQPNINIDNLMSEWPEEVERTLDTVGFPPA-----NLDCSLTEYIKIICNIFDI--P--LpsdesQ-----A----D 317  Anopheles dar...
XP_001961627  333 MYDAQPRKDIDALLEDWPRAFGEAETKSALDQAyksclQQDISLADYVRVLCERFGVegP--L-----E-----Sq--aD 398  Drosophila an...
XP_001997667  320 MFDSQPRKDIDALVEDWPRSFAMATTKNALDEAyrsclQQQISLADYVRVLCEHFGVdgPmeT-----Q-----S----D 385  Drosophila gr...
XP_002064519  319 LYDAQPRKDIDALMEDWPRSFGDSDTKDALEQAyrlclQQQISLSDYIRLLCEQFGIegP--L-----D-----Nq--tD 384  Drosophila wi...
XP_002014683  329 LYDAQPRKDIDALLEDWPRSYADAETKDALDQAyrsclQQHLPLADYVRVLCERFGIegP--Ld---sQ-----A----D 394  Drosophila pe...
XP_002079804  335 MYDAQPRKDIDVLLEDWPRSFGDEETINALDQAyrsclQQNISVAGYVGVLCERFGVegP--L-----E-----Sq--aD 400  Drosophila si...

A0E9L0        270 -----IIESLHVLFTLFS 282  Paramecium tetraurelia
EEZ97358      302 -----KIQALHLLFSLFa 314  red flour beetle
EHJ68444     2315 -----RIQALHLLFSLYS 2327 monarch butterfly
XP_001853252  233 ngqagYIQALYNLFNLYL 250  southern house mosquito
ETN60741      318 -----YIYALYNLFNLFL 330  Anopheles darlingi
XP_001961627  399 -----YIHNVQTLFALYL 411  Drosophila ananassae
XP_001997667  386 -----YIHSIQTLFALYL 398  Drosophila grimshawi
XP_002064519  385 -----YIHNVQTLFALYL 397  Drosophila willistoni
XP_002014683  395 -----YIHNVQTLFALYL 407  Drosophila persimilis
XP_002079804  401 -----YIHNVHTLFALYL 413  Drosophila simulans
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