1AQ5


Conserved Protein Domain Family
Matrilin_ccoil

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pfam10393: Matrilin_ccoil (this model, PSSM-Id:287378 is obsolete and has been replaced by 463070)
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Trimeric coiled-coil oligomerization domain of matrilin
This short domain is a coiled coil structure and has a single cysteine residue at the start which is likely to form a di-sulfide bridge with a corresponding cysteine in an upstream EGF (pfam00008) domain thereby spanning a VWA (pfam00092) domain. All three domains can be associated together as in the cartilage matrix protein matrilin, where this domain is likely to be responsible for oligomerization.
Statistics
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PSSM-Id: 287378
Aligned: 24 rows
Threshold Bit Score: 59.9948
Created: 28-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1AQ5_C         4 MEEDPCECKSIVKFQTKVEELINTLQQKLEAVAKRIEALENKI 46  chicken
O42401       407 TDEEACKCEAIAALQDSVTSRLEALSTKLDEVSQKLQAYQDRQ 449 chicken
Q5NJJ7       256 LTENACMCEAQIAFQRKVHNSIQTLSSRLDDISNRVQQFDLRR 298 zebrafish
XP_003446422 445 VVEDPCKCEARLAFQKQTQAAIQQLTAKLADVTGRIERLENTV 487 Nile tilapia
XP_006626434 367 VTADPCKCEAQLAFQSAVQSSIQALTTRLDEVTKKVQQFEYKL 409 spotted gar
XP_005803225 296 VVEDPCKCEAMLVFQRQTQATIQQLTAKLADISGRIEHLENTL 338 southern platyfish
AAH90753     218 EVKDPCACESLVEFQQVTMSTIEQLNQKLSAMTKRLEVLEKQL 260 zebrafish
XP_005814696 658 EVKDPCACENLVEFQQATMNRLDQFTQKLASMAARLEQLENQL 700 southern platyfish
XP_003411861 440 STEDACGCEATLAFQDKVSSYLQRLNTKLDDILKKLQVNEYGQ 482 African savanna elephant
XP_012396035 435 STQDACSCDATLAFQEKVTSYLQRLSAKLDDILEKLQVNDLRQ 477 Tasmanian devil
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