Conserved Protein Domain Family
ATG11
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pfam10377: ATG11 (this model, PSSM-Id:287363 is obsolete and has been replaced by 463063)
Autophagy-related protein 11
The function of this family is conflicting. In the fission yeast, Schizosaccharomyces pombe, this protein has been shown to interact with the telomere cap complex. However, in budding yeast, Saccharomyces cerevisiae, this protein is called ATG11 and is shown to be involved in autophagy.
Links
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Statistics
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PSSM-Id: 287363
Aligned: 79 rows
Threshold Bit Score: 84.5421
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q6CVG9        835 ETSVIRRFNDIESL-----AKKLRKENKNKKLLLQK-SA---R----DKITIYNFQPGDLALFLPINdqelllnssissl 901  Kluyveromyces...
XP_002289246  105 EVELANMKLELEKA-----RRDTQQSRQSQKNSATT-QT---EvnqcDKISHTSFQVGDVGLFMPTGrg----------- 164  Thalassiosira...
NP_001046086  609 vrvLEEKKESIKNL-----YSKLQLEKQTVSSVVNT-VQ---Qas-kEKISFGRFEVHELAVFVRNPag----------- 667  Japanese rice
XP_006343600  996 SKELEEKKDLVNTL-----YKKHQHEKQANK----------------EKISFGRLEVHEIAAFVLN-------------- 1040 potato
XP_002308415  997 gKELEEKKELVVTL-----YKKHQLEKQANK----------------ERISFSRFEVHEIAAFVLNSag----------- 1044 black cottonwood
XP_002528401  987 rKELEEKKELVTTL-----YKKHQLEKQANK----------------ERISFGRLEIHEIAAFVINTag----------- 1034 castor bean
EHB09881      502 ETSMMSVQENVHML-----S-----EEKQRIMLLERtLQ---Lke-eENKRLNQRLVGDLVLIILDErh----------- 556  naked mole-rat
XP_006412669  970 lekcrnleatsEQT-----RKDLEEKKELVKTLYTK-HQlgkQan-kEKISFGRLEVHEIAAFVLNQag----------- 1031 Eutrema salsu...
XP_319618     916 rqQLADRLDKLHDN-----LRTLEEEKNALACEVRK-HR---M----DTAQLLTCSDGDTVTYVWNPkn----------- 971  Anopheles gam...
XP_002053551  913 ESSVAAMRSSTYELgaagmSGTLTRSKSSGGGGGGG-GS---SssshRHITLEGCSKGDLVFVIWSMrh----------- 977  Drosophila vi...

Q6CVG9        902 nssfssiDLNSSTqsvmqrpnvvksdiaasilngssasiteniplskanrnpalnangrpdtfnvntqdsakkhvvWAIF 981  Kluyveromyces...
XP_002289246  165 ------kGGK-RI---------------------------------------------------------------YLAF 174  Thalassiosira...
NP_001046086  668 ---------------------------------------------------------------------------hYEAI 672  Japanese rice
XP_006343600 1041 ---------STGN---------------------------------------------------------------YEAI 1048 potato
XP_002308415 1045 ---------------------------------------------------------------------------hYEAI 1049 black cottonwood
XP_002528401 1035 ---------------------------------------------------------------------------hYEAI 1039 castor bean
EHB09881      557 ------dN--------------------------------------------------------------------YVLF 562  naked mole-rat
XP_006412669 1032 ---------------------------------------------------------------------------hYEAI 1036 Eutrema salsu...
XP_319618     972 ------sQ--------------------------------------------------------------------YNIV 977  Anopheles gam...
XP_002053551  978 ------gQ--------------------------------------------------------------------FMVV 983  Drosophila vi...

Q6CVG9        982 TAtnTDIKYVLRnstSNYELL------------K--------------DRE---------------WAMGRISALEKHVV 1020 Kluyveromyces...
XP_002289246  175 HS--GCPHRYLS---SDCIT-------------G--------------SPD---------------FVLGRIVYQEEFTA 207  Thalassiosira...
NP_001046086  673 NR--NCSNYYLS---EESVALfte------qhpR--------------HPA---------------YIIGQIVHIERRIA 712  Japanese rice
XP_006343600 1049 NR--NCPHYYLS---AESVALftd------hlpN--------------RPS---------------YIVGLVVHIERQTV 1088 potato
XP_002308415 1050 NR--NTSNYYLS---AESVALftd------hlpS--------------RPS---------------YIVGQIVHIERQAV 1089 black cottonwood
XP_002528401 1040 NR--SSSNYYLS---AESVALftd------hlpS--------------RPR---------------YIVGQIVHIERQTA 1079 castor bean
EHB09881      563 TV--SPTLYFLH---SESLPAldlkpgegasgaS--------------RRP---------------WVLGKVMEKEYCQA 608  naked mole-rat
XP_006412669 1037 NR--NCPNYYLS---SESEALftd------hlpN--------------RPT---------------YIVGQIVHIERQAV 1076 Eutrema salsu...
XP_319618     978 QS--GEFTYYLH---ESSYQAl-----------Glqpt------vrgeQPDt-------------lFGFGTVIHKEFCHA 1022 Anopheles gam...
XP_002053551  984 QD--SLTLYFVH---ADSLPAl-----------QltaptttassslppGAEgplavaelnhiplpyYAIGRIIDKEYCQA 1047 Drosophila vi...

Q6CVG9       1021 G-----------D---------------------------------DSK--------------------------NPFKF 1030 Kluyveromyces...
XP_002289246  208 G-----------Al-------------------------------eSDS--------------------------NPFGL 219  Thalassiosira...
NP_001046086  713 K-----------Lp-------------------------------sHGDqmeasrldsg-------grrspasmlNPYNL 743  Japanese rice
XP_006343600 1089 R-----------Stpstsvradhdrdhld-iltsdtgtsrlslnsgSTT--------------------------NPYGL 1130 potato
XP_002308415 1090 K-----------PllptstrpehgkvdevdllttdqgtdrlnfnlgPTS--------------------------NPYNL 1132 black cottonwood
XP_002528401 1080 K-----------Plparpehgrgnpvdhl--tsdtgtdlltlknlgSSS--------------------------NPYNL 1120 castor bean
EHB09881      609 K---------------------------------------------KAQ--------------------------NRFKV 617  naked mole-rat
XP_006412669 1077 KqpsplsasaspDa-------------------------------gKTDylgseqgsrtlasssvstsssgttttNPYGL 1125 Eutrema salsu...
XP_319618    1023 R---------------------------------------------RDD--------------------------NRYGV 1031 Anopheles gam...
XP_002053551 1048 R---------------------------------------------KDE--------------------------NRYRV 1056 Drosophila vi...

Q6CVG9       1031 PRNTVWYEVDAFF 1043 Kluyveromyces lactis NRRL Y-1140
XP_002289246  220 HVGTKYWVLTVEt 232  Thalassiosira pseudonana CCMP1335
NP_001046086  744 PVGCEYFLVTVAM 756  Japanese rice
XP_006343600 1131 PVGCEYFVVTVAM 1143 potato
XP_002308415 1133 PIGCEYFVVTVAM 1145 black cottonwood
XP_002528401 1121 PIGCEYFVVTVAM 1133 castor bean
EHB09881      618 PLGTKFYRVKAVs 630  naked mole-rat
XP_006412669 1126 STGCEYFIVTIAM 1138 Eutrema salsugineum
XP_319618    1032 PQGACFYRVKLKP 1044 Anopheles gambiae str. PEST
XP_002053551 1057 SKGSKFYRIKLAP 1069 Drosophila virilis
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