Conserved Protein Domain Family
DUF2340

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pfam10209: DUF2340 (this model, PSSM-Id:287213 is obsolete and has been replaced by 462998)
Uncharacterized conserved protein (DUF2340)
This is a family of small proteins of approximately 150 amino acids of unknown function.
Statistics
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PSSM-Id: 287213
Aligned: 81 rows
Threshold Bit Score: 136.111
Created: 28-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4P793        44 ITIRIIKSFEFRSMKAYVIKSIDLtTTTVSELEDMCRAEVKRNSSFRA-FRSYadQLDTLKLYTRAHGSKTTNLIINLDH 122 Ustilago maydis
XP_010746769   7 VTVRLVRSFEHRNFRPVVFHGVNVe-LTVLDFMQLVRDDISTRPGLPPpFKKY--SYDTMKIIHQAHGAKTNELVMSLDD 83  large yellow cr...
XP_003978317   7 VTVRLVRSFEHRNFKPVVFHGVSL-DQKVLDFIQLVRDDVAKRPGVPPpFRNH--DYDTMKIVHQAFGAKTNELVVSLDD 83  torafugu
XP_005813563  18 VTVRLIRSFEQRNFKPVVFQEVSL-NQTVQDFMRWVRDDIATRDGLPPpFRKY--GYDTMKIIHQAHSSKTSELVMSLDD 94  southern platyfish
EKC41518      20 VTIRLIRSFEHRNLKHVVYHDVDL-TQSVADFKEFVRKDISTRPGLPPpFKTY--SFDTLKISHKAYGYKSNDPVINLED 96  Pacific oyster
XP_004086948   6 VTVRLVRSFEKRNFRPMVFREVQL-DQSVRDFMQRVRDDIMTRAGLPPpFRKH--AYDTMKIIHHAHGAKTNELVMSTED 82  Japanese medaka
EFX88526       6 IIIRVIRSFEYRNIRNVVLKNVPL-SLTTEELKTRIIQELGVAPGLPPpFRKY--EYDTLKIEHHAHGAKTNDPVINHEN 82  common water flea
XP_784271      9 VTIRLIRSFLHRNIKHIVLHNVNLdD-TVEELMNKIKEDIKTRSGLPPpFRKH--GYDTLKVEYKKHGSKTSDPVINKED 85  purple sea urchin
XP_001633467  10 VVVRLIRSFEYRNIKHVAFKNVSL-SQTAKDFGEFVKKEVESRKDVPPpFRSF--RYDKFKIQHKAHHAKTNDPVIRTDD 86  starlet sea ane...
CCD78279       7 vpVTLIRSFKYRTTSYLPLSNISq-SATVKDLFDRIHHEVKTSSAIPPpFKNL--CYDALKVRHKAFNTKSGELLIDLQG 83  Schistosoma man...
Q4P793       123 PE-WVLEDanlgalvngqsnerltkqNTTLAQIGIENETELSFFNRQAYEQFLANPNTKW 181 Ustilago maydis
XP_010746769  84 DEkLILQh------------------DQTLRAAGVDNETEVAFFRKEDYGLYKANPRTAW 125 large yellow croaker
XP_003978317  84 DEqLILQN------------------DQTLREAGVVNETEVAFFRRRDYGLYKANPTCLW 125 torafugu
XP_005813563  95 DEkLILQD------------------DQTLKAAGVANETEVGFFRKEDYVFYKANPKSKW 136 southern platyfish
EKC41518      97 DEkLILKEe-----------------S-SLKENGVENETEISFFKMEDYLEYKKNPHLAW 138 Pacific oyster
XP_004086948  83 DDqLILQE------------------DQSLRAAGVAHETEVAFFNKEDYGLYKANPTTSW 124 Japanese medaka
EFX88526      83 DEgLILKa------------------ERTLKESDVRHETEISFFKYDDYMSYKKNPVLKi 124 common water flea
XP_784271     86 DDkLMLKP------------------DQTLKACNIENETEISFFNRKEYEQYKTDSTVVW 127 purple sea urchin
XP_001633467  87 DDtLILKE------------------ELTLDANGVEHETELSFFNYDDYLKYKENPQLKW 128 starlet sea anemone
CCD78279      84 D--PIPSNs-----------------DLTLESLGIVNETEVAVFRMSDFLAQRDNPEFLW 124 Schistosoma mansoni
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