Conserved Protein Domain Family
SDA1
?
pfam05285: SDA1 (this model, PSSM-Id:283052 is obsolete and has been replaced by 461611)
SDA1
This family consists of several SDA1 protein homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability and is localized in the nucleus.
Links
?
Statistics
?
PSSM-Id: 283052
Aligned: 134 rows
Threshold Bit Score: 55.2877
Created: 26-Jun-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q4QE53       418 MNADLLKDLAEYKNRRg----DKGVMMAARALIQLYRDVYPELLPAKLRGSKAGVADTATRPVYGSKHVYtDIPGLElLY 493 Leishmania major
XP_002312655 442 MNEDLLQDLVLYKKSH-----EKAVSIAARSLITLFREVCPSLLIKKDRGRPIDPKA--RPKAYGEVNIVsSVPGVE-LL 513 black cottonwood
XP_002867296 400 MTEDLLHDLAQYKTDKkyrthRKAISAASASLIALFREINPLLLVKKDRGRPG--GHIARPKKYGEINVFsNVPNVE-LL 476 Arabidopsis lyr...
XP_003538583 447 MNEDLLQDLALYKKSR-----EKAVSIAARSLIGLFREVCPSLLVKKDRGRPIDPKA--RPKAYGEQNVAtDVPDVE-LL 518 soybean
XP_008668839 448 MNEDLLQDLVLYKKSH-----EKAVSIAARSLITLFREICPSLLVKKDRGRPVDPKA--RPKAFGEVTVAsNVPGAE-LL 519 Zea mays
XP_006653797 427 MNEDLLQDLVLYKKSH-----EKAVSIAARSLITLFREICPSLLVKKDRGRPIDPKA--RPKAFGEATIAtDVPGAE-LL 498 malo sina
EMT07559     408 MNEDLLQDLVLYKKSH-----EKAVSIAARSLITLFREICPSLLVKKDRGRPIDP--TARPKAFGETTIAsDVPGAE-LL 479 Aegilops tauschii
EMS61867     342 MNEDLLQDLVLYKKSH-----EKAVSIAARSLITLFREICPSLLVKKDRGRPIDP--TARPKAFGETTIAsDVPGAE-LL 413 Triticum urartu
XP_006349783 453 MTEDLLQDLVLYKKSN-----EKAVSASARSLLTLFREVCPSLLVKKDRGRPTNPKA--RPKAFGEVSVAsSVPGIE-LL 524 potato
XP_003579342 447 MNEDLLQDLVLYKKSH-----EKAVSIAARSLITLFREICPSLLVKKDRGRPIDPKA--RPKAFGETTISsDVPGAE-LL 518 Brachypodium di...

Q4QE53       494 H---DIE--------------------------NNAG------------DDESGSESss---------------sEVD-- 515 Leishmania major
XP_002312655 514 E---ELN--------------------------DDDDedkedsddvddlASRGSDDDse---------------nEEM-- 547 black cottonwood
XP_002867296 477 Q---ESDddevalpgt--------ddigqelitEDEA------------EEDSNDEDsn---------------dGDD-- 516 Arabidopsis lyr...
XP_003538583 519 QtaiDND--------------------------DEQE------------SDHSDGSAcs---------------vSDN-- 543 soybean
XP_008668839 520 D---ENI--------------------------SSEG------------ESSDDESDgf---------------hSDDem 543 Zea mays
XP_006653797 499 D---EDF--------------------------SSEG------------EDSDDESEafdsndekelksapgtkmEDL-- 535 malo sina
EMT07559     480 D---EEM--------------------------SPEG------------G----SDDes---------------dAFD-- 497 Aegilops tauschii
EMS61867     414 D---EEM--------------------------SPEG------------G----SDDes---------------dAFD-- 431 Triticum urartu
XP_006349783 525 D---QEDsdddveegsvglsdhddqsdddvnlgEEDA------------NCEKDGDDas---------------dNES-- 572 potato
XP_003579342 519 D---EDI--------------------------SSEG------------EGSDDESDaf---------------gSDD-- 540 Brachypodium di...

Q4QE53       516 ---------S-----SSGEW--------------------------------------------V------TdSDSeada 531 Leishmania major
XP_002312655 548 ---------V-----SASDE--------------------------------------------G------DqIYS---- 559 black cottonwood
XP_002867296 517 ---------M-----HSTEI--------------------------------------------DtlvsgdEeNDS---- 534 Arabidopsis lyr...
XP_003538583 544 ---------D-----QENDLmsinddddnddenqlcsddpesddeakdsdvisdddderssddeA------DvSDA---- 599 soybean
XP_008668839 544 dltpappgtE-----ENMEG--------------------------------------------S------SvANK---- 564 Zea mays
XP_006653797 536 ---------S-----EANKL--------------------------------------------D------TdEGM---- 547 malo sina
EMT07559     498 ---------S-----DDDEVlpsasgtrqs-------------------------leslsnkldA------SeDHE---- 528 Aegilops tauschii
EMS61867     432 ---------S-----DDEEVlpsasgtrqs-------------------------leslsnkldA------SeDHE---- 462 Triticum urartu
XP_006349783 573 ---------G-----DDHEI--------------------------------------------D------DeCDS---- 584 potato
XP_003579342 541 ---------EkvlpsANDTQ--------------------------------------------Q------SlEGS---- 557 Brachypodium di...

Q4QE53       532 DDVd-----------------------------------GE--------------------------------------- 537 Leishmania major
XP_002312655 560 DDAe-----------------------------------SE--------------------------------------- 565 black cottonwood
XP_002867296 535 DEAe-----------------------------------TD--------------------------------------- 540 Arabidopsis lyr...
XP_003538583 600 DEVk-----------------------------------GD--------------------------------------- 605 soybean
XP_008668839 565 HDAd-----------------------------------GDtkeeddasddedgtdq-----------ddsnsdsdeldd 598 Zea mays
XP_006653797 548 KEEdqlsgdeddteevdedqdisdndsedddelehdsdlDE--------------------------------------- 588 malo sina
EMT07559     529 DEVs-----------------------------------GEqddaeeldeddsdddmdeldddsdvdgdtdasaededee 573 Aegilops tauschii
EMS61867     463 DEVs-----------------------------------GEqddaeeldeddsdddmdeldddsdvdgdtdasdededee 507 Triticum urartu
XP_006349783 585 DEDn-----------------------------------KS--------------------------------------- 590 potato
XP_003579342 558 SDKa-----------------------------------D---------------------------------------- 562 Brachypodium di...

Q4QE53       538 ----FVDVAdssaeeedesedgcpqlvpvhehahsatdrtdadgegphkrarleeaapvsvasqnsA------------- 600 Leishmania major
XP_002312655 566 ----DGDVQdgsv--------------------------------------------------dedG------------- 578 black cottonwood
XP_002867296 541 ----WENEEddge--------------------------------------------------asvE------------- 553 Arabidopsis lyr...
XP_003538583 606 ----DIEDNeqad--------------------------------------------------gedS------------- 618 soybean
XP_008668839 599 dsdvDVGTDisde--------------------------------------------------degD------------- 615 Zea mays
XP_006653797 589 ----ENDVSdddee-----------------------------------------------lnenlS------------- 604 malo sina
EMT07559     574 lnddSENEDsdqe--------------------------------------------------vedS------------- 590 Aegilops tauschii
EMS61867     508 lnedSENEDsdqe--------------------------------------------------vedS------------- 524 Triticum urartu
XP_006349783 591 ----QAAEEfseddd----------------------------------------------aidsaS------------- 607 potato
XP_003579342 563 -----IDEDnree--------------------------------------------------eevSgeqddteevdedd 587 Brachypodium di...

Q4QE53       601 ---------------------------------------Al--------------------------------------- 602 Leishmania major
XP_002312655 579 ---------------------------------------Ddavdndsgggeggdededqeendedsyaraiinkvnksta 619 black cottonwood
XP_002867296 554 ---------------------------------------Gs--------------------------------------- 555 Arabidopsis lyr...
XP_003538583 619 ---------------------------------------Dv--------------------------------------- 620 soybean
XP_008668839 616 ---------------------------------------Dgelke----------------------------------- 621 Zea mays
XP_006653797 605 ---------------------------------------Ds--------------------------------------- 606 malo sina
EMT07559     591 ---------------------------------------De--------------------------------------- 592 Aegilops tauschii
EMS61867     525 ---------------------------------------De--------------------------------------- 526 Triticum urartu
XP_006349783 608 ---------------------------------------At--------------------------------------- 609 potato
XP_003579342 588 sdddideleddldtdgdtdvsddddeeelnddsenegsdQv--------------------------------------- 628 Brachypodium di...

Q4QE53       603 -----SE------------------------------------S-----------------------SAdnedegmdsdg 618 Leishmania major
XP_002312655 620 rkrkfSDfdgq----------------------------llaaD-----------------------TS----------- 637 black cottonwood
XP_002867296 556 -----GN------------------------------------R-----------------------EK----------- 560 Arabidopsis lyr...
XP_003538583 621 -----SEheedgd-------------------------lhslsD-----------------------DG----------- 636 soybean
XP_008668839 622 -singSE------------------------------------D-----------------------EA----------- 630 Zea mays
XP_006653797 607 -----DEgsdqdggsdqddkskdssckankrklsdyigqlnaaD-----------------------AS----------- 647 malo sina
EMT07559     593 -----EDkskgsgskvqkr------------klsdyigqldaaD-----------------------AS----------- 621 Aegilops tauschii
EMS61867     527 -----GDkskgsgskvqkr------------klsdyigqldaaD-----------------------AS----------- 555 Triticum urartu
XP_006349783 610 -----ED------------------------------------DesdgeeegidgdimqdnnswaseED----------- 637 potato
XP_003579342 629 -----ED------------------------------------S-----------------------DE----------- 633 Brachypodium di...

Q4QE53       619 dedgeevvsndeeaedesefgweevsddeesecdeestaeeneeaplslsaalanansgadwfedltdgmssknasSSPR 698 Leishmania major
XP_002312655 638 ----------------------------------------------------------------------------LRAL 641 black cottonwood
XP_002867296 561 ----------------------------------------------------------------------------AEGK 564 Arabidopsis lyr...
XP_003538583 637 ----------------------------------------------------------------------------LVTK 640 soybean
XP_008668839 631 ----------------------------------------------------------------------------LDQN 634 Zea mays
XP_006653797 648 ----------------------------------------------------------------------------LRAL 651 malo sina
EMT07559     622 ----------------------------------------------------------------------------LRAL 625 Aegilops tauschii
EMS61867     556 ----------------------------------------------------------------------------LRAL 559 Triticum urartu
XP_006349783 638 ----------------------------------------------------------------------------DVDE 641 potato
XP_003579342 634 ----------------------------------------------------------------------------EDKS 637 Brachypodium di...

Q4QE53       699 A------------------------GSV--------------------SSSK---------------------------- 706 Leishmania major
XP_002312655 642 K------------------------KM---------------------TEEK---------------------------- 648 black cottonwood
XP_002867296 565 K------------------------RKLvdfdasflaadtslralkrcAEAK---------------------------- 592 Arabidopsis lyr...
XP_003538583 641 S------------------------TMK--------------------DSAK---------------------------- 648 soybean
XP_008668839 635 E------------------------DSE--------------------EEDKskgsgskaqkrklndyigqlnsadaslr 670 Zea mays
XP_006653797 652 K------------------------KL---------------------AGVK---------------------------- 658 malo sina
EMT07559     626 K------------------------KL---------------------AGAK---------------------------- 632 Aegilops tauschii
EMS61867     560 K------------------------KL---------------------AGAK---------------------------- 566 Triticum urartu
XP_006349783 642 KvskgtkrkisdidvnaasnslralKKL--------------------AGAN---------------------------- 673 potato
XP_003579342 638 K------------------------DSN--------------------SKVQ---------------------------- 645 Brachypodium di...

Q4QE53       707 ---------ASStt-----sISSSR-----------------------LLTDSDFQKINQL-R---------TQH----- 734 Leishmania major
XP_002312655 649 ---------LKKpp-----sDSTDG-----------------------ILSNEDFQRIKELt----------AKK----- 676 black cottonwood
XP_002867296 593 ---------REQps-----fAERDG-----------------------ILSNEDFQKIKEL-Kak-----kdAKI----- 624 Arabidopsis lyr...
XP_003538583 649 ---------KRKftdfngqlIAADTslralkklagrqmgdvipesndgILSNEDFKRIKEL-Kak-----seAKN----- 708 soybean
XP_008668839 671 alkrlatakKAEep-----sDETGK-----------------------ILSDEDFKRIKEL-Kak-----keAKLalaqh 716 Zea mays
XP_006653797 659 ---------KAEss-----cDEAGK-----------------------ILSDEDFKRIKEL-Kar-----keAKL----- 690 malo sina
EMT07559     633 ---------KAEas-----tDEAGR-----------------------IFGDEDFKRIKEL-KakkaaklalVQH----- 669 Aegilops tauschii
EMS61867     567 ---------KAEas-----tDEAGR-----------------------IFGDEDFKRIKEL-KakkaaklalVQH----- 603 Triticum urartu
XP_006349783 674 ---------MEPns-----lNMEDG-----------------------ILSNEDFKRIKEL-Kak-----ndART----- 705 potato
XP_003579342 646 ---------KRKls-----dYAGQ-------------------------LDAAD-ASLRALkRla-----agAKK----- 675 Brachypodium di...

Q4QE53       735 --GSH--Qslrgkrk-------erdvrskKRHDLIHgisndldAHDIEHFTeKKrETDKQAKIEQAQ------------- 790 Leishmania major
XP_002312655 677 --DAR--Ialnrqgf-------kvpssddLSAKRVD-------PATLEVHV--RaRLNKEERLALVR------------- 723 black cottonwood
XP_002867296 625 --ALarkgfk-------------vpdsdkLSKKLVN-------PAKLEAHI--RhKLTKEERLELVK------------- 667 Arabidopsis lyr...
XP_003538583 709 --ALAqqGlaksaat-------kvpssgqLNLKRVD-------GTMLEAHI--RkKLNKDERLALVR------------- 757 soybean
XP_008668839 717 glIKG--Vdtrsvtf-------kmpssdqLSRKRVD-------PLELEAHV--RrKMSKEERLALVK------------- 765 Zea mays
XP_006653797 691 --ALA--QhglskgsdtksvtfkmpssdqLSMKRVD-------PSKLEAHI-KR-KLTKEERLEMVK------------- 744 malo sina
EMT07559     670 --GLSk-Gdtrsvtf-------klpstdeLSLKRVD-------PSELAAHV-KR-KMTKEERLEMVK------------- 717 Aegilops tauschii
EMS61867     604 --GLSk-Gdtrsvtf-------klpstdeLSLKRVD-------PSELAAHV-KR-KMTKEERLEMVK------------- 651 Triticum urartu
XP_006349783 706 --VLA--Qhgfkl-----------pssdqISTKRVD-------AAKLEANI--RkKLSKEERLAIIR------------- 748 potato
XP_003579342 676 --AET--Stdeagri-------fsdedfkR--------------------I-KVlKAKKEAKLALVQhglskgdtrsvtf 723 Brachypodium di...

Q4QE53       791 ------------------------------------ELRKASSKFELRR-KKKSKLNSTHGEHSKRGKLFQMTKRsqrva 833 Leishmania major
XP_002312655 724 ------------------------------------AGREDRESYKSRIaVKQKKTGGQSNRQKEHKKQMPLAAK----- 762 black cottonwood
XP_002867296 668 ------------------------------------AGREDRGKYKSKTaIKQKKTGGSSNRQKEHKKNMPLAAV----- 706 Arabidopsis lyr...
XP_003538583 758 ------------------------------------AGREERGKYQARTaVKQNKTGGLSNRQKEHKKKMPLAAK----- 796 soybean
XP_008668839 766 ------------------------------------AGREDRGPYMARAaVKQKKTGGLSNKQKQHKKRMPLAAT----- 804 Zea mays
XP_006653797 745 ------------------------------------AGREDRGKYQARTaVKQKKTGGLSNRQKQHKKRMPLAAS----- 783 malo sina
EMT07559     718 ------------------------------------AGREDRGKYQARAaIKQKKTGGSSNKQKQHQKRMPLAAK----- 756 Aegilops tauschii
EMS61867     652 ------------------------------------AGREDRGKYQARAaIKQKKTGGSSNKQKQHQKKMPLAAK----- 690 Triticum urartu
XP_006349783 749 ------------------------------------AGREDRGRYQAKTaLKKKKTGGSSNQQKEHQKRMPLAAK----- 787 potato
XP_003579342 724 kipssdqlsmkrvdpsqleahikrkmskeqrlelvkAGREDRGKYQARAsIKKKKTGGSSNKQKQHSKRMPLAAS----- 798 Brachypodium di...

Q4QE53       834 aKLKSSVAdRATRAKEMQKKDIKFRI 859 Leishmania major
XP_002312655 763 -RAKVARS-RQEKKKKQSLSGKQFRG 786 black cottonwood
XP_002867296 707 -RSKAGKS-KRVKKKKNSLSGSQFRG 730 Arabidopsis lyrata subsp. lyrata
XP_003538583 797 -RDKVSRT-RIEKKRKNQRSGKQFRG 820 soybean
XP_008668839 805 -RAKAARS-RQEKKQQRKRSGNQFRG 828 Zea mays
XP_006653797 784 -RAKAARS-RQEKKEKQKRSGKQFRG 807 malo sina
EMT07559     757 -RAKAARS-RQEKKTKAKHSGKQFRG 780 Aegilops tauschii
EMS61867     691 -RAKAARS-RQEKKTKAKHSGKQFRG 714 Triticum urartu
XP_006349783 788 -RSKVAKS-KIEKKRKQARAGKQFRG 811 potato
XP_003579342 799 -RAKAARS-RQEKKTKAKHSAKQFRG 822 Brachypodium distachyon
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap