4NJ5,1PEG


Conserved Protein Domain Family
Pre-SET

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pfam05033: Pre-SET (this model, PSSM-Id:282838 is obsolete and has been replaced by 461530)
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Pre-SET motif
This protein motif is a zinc binding motif. It contains 9 conserved cysteines that coordinate three zinc ions. It is thought that this region plays a structural role in stabilizing SET domains.
Statistics
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PSSM-Id: 282838
Aligned: 371 rows
Threshold Bit Score: 31.2251
Created: 25-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4NJ5_A        255 ISNGKENVPVYLFND----I-DSD-QEp------------lY----YEYLAQTS---F-P------PGLf---VQQsGNA 299  thale cress
XP_004233646 1211 ISFGQESVPITCVVEe--nLfAs--LHiladgsngqittssLpwesFTYATKPL---IdQsldlaiGSSq---------- 1273 tomato
XP_002878699 1079 ISFGKESVPI-CVVDd--dLlNSGkPYe-------------RpwesFTYVTNSI---LhPsmelvkENLq---------- 1129 Arabidopsis l...
CDY39668     1079 ISFGKEPVPVSCVVDe--dLlKqc---------------ekKpwecFTYVTKPM---LnPsvdlskEKLq---------- 1128 rape
XP_006856156 1324 LSFGKESVPVACVVDq--eIiDs--IYgvvnde--lkakelSpwkgFTYITERL---LdPslgldtKSSq---------- 1384 Amborella tri...
XP_001782279  392 LSNGQEPVPIPCVIDe--dLlRPCtCAnccenginaalevaEpwktFSYINKRL---LdPslgldtESSk---------- 456  Physcomitrell...
XP_001768106  429 lSNGLEKVPIRCVVDg--sViEPCtCSlcteggsltssgdsQpwnnFVYITQRH---LdPslgldtKSSq---------- 493  Physcomitrell...
CAP24442      365 MKEEAEIKAIEFMNAegrkItFKEaLAk------------------FFYSSVNIvdkEaFdlcknsLASlstpDLIkKFY 426  Caenorhabditi...
ERG82788       67 LTMGRERHPITVEND----VgDGAvLDe-----------------eFEYASTVLdldVfRckidfsLS------------ 113  pig roundworm
XP_001900027   67 ITMGRERVAIPLENG----TdDGAtLDp-----------------nFEYVNAVDdhdSfQthidfsLACr---------- 115  Brugia malayi
4NJ5_A        300 ---S------G-CD--CVNg-CgS--GCLCEA-------------KNSGE----------------IAYDyNGT------ 329  thale cress
XP_004233646 1274 ---------lG-CA--CPNsaC-SsqTCDHIY-------------LFDNDyddakdiy-gkpmrgrFPYDeRGR------ 1320 tomato
XP_002878699 1130 ---------lR-CG--CRSsvC-SpvTCDHVY-------------LFGNDfedardiy-gksmrfrFPYDgKQR------ 1176 Arabidopsis l...
CDY39668     1129 ---------lK-CG--CPGsvC-SpvTCDHVY-------------LFGNDfeesrdiy-gksmrcrFPYDdKER------ 1175 rape
XP_006856156 1385 ---------lG-CA--CPQsrC-HpeTCDHVY-------------LFDNDnenaedih-gksmhgrFPYDeKGR------ 1431 Amborella tri...
XP_001782279  457 ---------lG-CA--CGEgrC-DsgHCDHVL-------------MFDNDngeacdks-gvaikgrFPYDaQGR------ 503  Physcomitrell...
XP_001768106  494 ---------vG-CS--CTGdeC-SasTCDHVS-------------MFDTDnaeartid-gksargqFPYDeIGR------ 540  Physcomitrell...
CAP24442      427 khsTifpgrkGvCSn--------Sa-GCKCNQrfnilygldsgmgRRMVDsghvqpvkqikhdsngILdladf------- 490  Caenorhabditi...
ERG82788      114 --------------------------HCPCVSr---------------------------------CVYDsSGRltdkvr 134  pig roundworm
XP_001900027  116 ------------CAndCQ---V----DCPCLAr---------------------------------CTYDaDGHltgrav 143  Brugia malayi
4NJ5_A        330 -LI--RQKPLIHECGSACQCPpsCRNR 353  thale cress
XP_004233646 1321 -IMleEgy-lIYECNQWCSCSksCQNR 1345 tomato
XP_002878699 1177 -IIleEgy-pVYECNKFCGCSrtCQNR 1201 Arabidopsis lyrata subsp. lyrata
CDY39668     1176 -IIleEgy-pVYECNELCGCSrtCHNR 1200 rape
XP_006856156 1432 -IIleEgy-lVYECNSMCSCDrtCQNR 1456 Amborella trichopoda
XP_001782279  504 -IIleEgy-mVYECNSSCLCRedCQNR 528  Physcomitrella patens
XP_001768106  541 -IIldVgy-mVYECNSSCQCKdsCRNR 565  Physcomitrella patens
CAP24442      491 ---rvsdlRVIMECSDECGCPhtCPRR 514  Caenorhabditis briggsae
ERG82788      135 eMAekQELGVILECNASCFCSsqCPSR 161  pig roundworm
XP_001900027  144 eLAdkAELGVLLECSSCCFCSnkCRSR 170  Brugia malayi
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