Conserved Protein Domain Family
HCO3_cotransp

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pfam00955: HCO3_cotransp (this model, PSSM-Id:279322 is obsolete and has been replaced by 460009)
HCO3- transporter family
This family contains Band 3 anion exchange proteins that exchange CL-/HCO3-. This family also includes cotransporters of Na+/HCO3-.
Statistics
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PSSM-Id: 279322
Aligned: 80 rows
Threshold Bit Score: 455.808
Created: 11-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q16S12        487 GRLFGGLVNDLKRKKPFYLSDFKDGL-----S------LQ-----CVASWIFLYFACLSPIITFGGLLGSAT-----GNN 545  yellow fever ...
EFX82307      152 GQFGQGIREDLCRRLPHYISDYVDGV-----Vgkk-tpQK-----VLSTTFFLYFACLLPAIAFGVLNDHNT-----HGK 215  common water ...
XP_011415674  364 CSLFRGIREDLRRRIPVYVSDFKDGVvgnksI------QK-----TISTTFFLYFACLMPSIAFGVLNANNT-----KGQ 427  Pacific oyster
XP_001900286  523 wyLFRGLSNDFLRRIKYYSSDYLDGL-----Rgsk-tiQK-----LFSSIVFLYFACLLPAIAFGVLNDDNT-----NGS 586  Brugia malayi
XP_002630864  415 wyPFRGLKDEFKRRLAIYPSDYLDGI-----Rghk-tvQK-----LFSTVVFLYFACLLPAIAFGVLNDDNT-----KGA 478  Caenorhabditi...
XP_009022983  214 hwmgsGLMEDWKKRAPHYLADYTDGF-----C------GQntlhkTLSTTFFLYFACILPAIALGVLYYNNTsgpsgEGQ 282  Helobdella ro...
GAA52766      373 vcFGKGLYQDLRNRLPHYWSDYSEGI-----Lgkn-tlRK-----TISGTLFLYFACLLPTIAFGVLNFANT-----NGQ 436  Clonorchis si...
XP_011609196  298 lkaGKGVYRDLRRRLPLYPSDFTDGL-----TgkdrclLK-----YTTTAIFLYIAILLPAIAFGSLNDEST-----RGE 362  torafugu
CDS30573      386 yKFMSGLIADLRRRVPLYASDFADGF-----Rgah-tmRK-----VTSSVFFLYFACLLPSIAFGVLNYNNT-----NGK 449  Hymenolepis m...
EFX89365      258 crFGQGIREDLSRRLPHYISDYKDGL-----Tgvk-tpQK-----VLSTTLFLYFACILPAIAFGVLNDHNT-----HGK 321  common water ...
Q16S12        546 IAAMESLVSGFVCGIGYGLFSGQPLTILGSTGPVLVFETIVYDFCMRVGWDYLTFRFWIGTWVTIILVILVAIDASALVC 625  yellow fever ...
EFX82307      216 IGVKKVIMGQTIGGLFFAIFGGQPLLILLTTAPLALYIKVISSICDDFQLDFFAMYGCVGLWCAFFLLIFSLFNVSRLMH 295  common water ...
XP_011415674  428 LNVEKVLYSQTFGGLVFAFFGGTPHIVLLTTAPLALYTKIIYSICQDFDIDFPAMYACVGLWNSFFLFLYSAFDLSVLMK 507  Pacific oyster
XP_001900286  587 INVRKVITAQALGGIFFAIFGGQPMIILLTTVPLAIYIKVIYKIAEELGYDFFAMYACVGLWCQLFLILYASTDMCSLMK 666  Brugia malayi
XP_002630864  479 INVRKVIIAQAIGGIFFSLFGGQPMIILLTTVPLAIYIKVIYKISQELGYDFLAMYACVGLFCQLFLILYSATELCSLMK 558  Caenorhabditi...
XP_009022983  283 IDVRKVIYSQTISGLTFAVFGGQPMVILLTTAPLAIYTKVIFNICEDLKLDFAGMFACTGLWNSFFLLIYAFTDASKLMR 362  Helobdella ro...
GAA52766      437 IDVTQMIISQTIGGLCNGFFGGQPLIVLLSTAPLALYTKIVYTICESFGLNFTAMYGCVGLFNSLFLFGFSVTGLSSLMR 516  Clonorchis si...
XP_011609196  363 IDVQKTIVGQSIGGVIYALFAGSPLVIPLTTAPLAIFISVIRGICDDYDLDFDSFYACIGLWNSLFLILGGLFNVSLLMK 442  torafugu
CDS30573      450 IGVFRILLSQTIGGLFFGFTGGQPLTVLLTTAPLALYVKLIYTVTVTYDLEFYAFFGCVGLFNAGFLFIYAAFDAGRIMR 529  Hymenolepis m...
EFX89365      322 IDVKKVIIGQTIGGLFFFVFGGQPLLILLTTAPLSLYIKVIYSICEDFQLDFYAMYGCVGLWSSFFLVLYSLFDVSRLMR 401  common water ...
Q16S12        626 YITRFTEENFACLIAFIFIYK-------AVENV------------------------L----HIGKDyplntagskydcs 670  yellow fever ...
EFX82307      296 WCTRSTEEIFGLFISVAFCVD-------ACRDT------------------------A----KNfqtnfyss-------- 332  common water ...
XP_011415674  508 WSTRSSEEIFALFISIAFCVD-------AFKDAvsnfaahynipacsmtttansavnY----SI---------------- 560  Pacific oyster
XP_001900286  667 LATRSAEEMFSLFIAIAFTVEsiralhtSFKKN------------------------Y----HN---------------- 702  Brugia malayi
XP_002630864  559 FATRSAEEMFSLFIAIAFTVE-------SIRAI------------------------HnsfkKN---------------- 591  Caenorhabditi...
XP_009022983  363 WCTRSTEEIFALFISLALAVD-------AFRNV------------------------F----YD---------------- 391  Helobdella ro...
GAA52766      517 WSTRSTEEIFALFVSVAFIMG-------AVKDC------------------------Y----KT---------------- 545  Clonorchis si...
XP_011609196  443 LFKRSTEEVIALFISIAFVGD-------AVKGT------------------------V----KI---------------- 471  torafugu
CDS30573      530 WSTRSTEEIFAMFVSIAFLVE-------AYRDA------------------------A----KEFNAhyidcippsqclk 574  Hymenolepis m...
EFX89365      402 WSTRSTEEIFALFISIAFCVD-------AFRDT------------------------V----KNFQEnynapsckgdpas 446  common water ...
Q16S12        671 c------------------------------------lppgdqplntdivHEW---------A------Q--------YD 691  yellow fever ...
EFX82307      333 ---------------------------------------------qcqgenaI---------T------N--------IT 344  common water ...
XP_011415674  561 ----------------------------------------------------T---------S------N--------LT 565  Pacific oyster
XP_001900286  703 ----------------------------------------------------C---------D------S--------TN 707  Brugia malayi
XP_002630864  592 ----------------------------------------------------Y---------N------D--------CD 596  Caenorhabditi...
XP_009022983  392 ----------------------------------------------------F---------R------InyhspacyKN 404  Helobdella ro...
GAA52766      546 ----------------------------------------------------FqkyyvcqtpT------Q--------IM 559  Clonorchis si...
XP_011609196  472 ----------------------------------------------------F---------QhfyrgpT--------LT 482  torafugu
CDS30573      575 sndlamaknanqysmpdnhsldpsaisatsynytsialllsplammlndsSNA---------N------At-------AS 632  Hymenolepis m...
EFX89365      447 lavnv----------------------------sskanrvdtptaannsvVAY---------L------Ls-------QG 476  common water ...
Q16S12        692 KKtcal-------------------lngT---------LTGY-------------------------DCaKPEYIS---- 714  yellow fever ...
EFX82307      345 KSl------------------------sSsltfyswndTRAN-------------------------DSsDAIAYP---- 371  common water ...
XP_011415674  566 NSv------------------------aS---------VVNS-------------------------TApPSGCER---- 583  Pacific oyster
XP_001900286  708 MRkkgsvdddllpsfrlnstsfssvvdiT---------ETST-------------------------PFqMYDKLCh--- 750  Brugia malayi
XP_002630864  597 TSa------------------------iS---------MKAA-------------------------RTaLDAFQNgttn 618  Caenorhabditi...
XP_009022983  405 QSi------------------------pS---------SPSL-------------------------SSsSSSSSS---- 422  Helobdella ro...
GAA52766      560 EAn------------------------qT---------IAGNrtikniigftgnsaehldenlskeaGFlLESSSC---- 602  Clonorchis si...
XP_011609196  483 TTn------------------------sT---------LVFQ-------------------------QLeGILNQT---- 500  torafugu
CDS30573      633 NSt------------------------------------------------------------------aVDKAVCk--- 643  Hymenolepis m...
EFX89365      477 NAs------------------------------------------------------------------vSEIVECn--- 487  common water ...
Q16S12        715 -----------------------D------------------VFL-MSII-----------------------LF----- 724  yellow fever ...
EFX82307      372 -----------------------Ndepmgv-------ecnqaSSV-LFLL-----------------------LM----- 392  common water ...
XP_011415674  584 -----------------------D------------------VSL-LYLL-----------------------LL----- 593  Pacific oyster
XP_001900286  751 ----------------------rD------------------TSI-LYML-----------------------LM----- 761  Brugia malayi
XP_002630864  619 tdsivgnitssmsigdtgslcrrD------------------TSI-LYML-----------------------LM----- 651  Caenorhabditi...
XP_009022983  423 -----------------------S------------------TAL-LNNIeaggkllayasecsrensllyllLM----- 455  Helobdella ro...
GAA52766      603 -----------------------Nk----------------eVAL-LYLL-----------------------LL----- 614  Clonorchis si...
XP_011609196  501 -----------------------NnqtgnglgehgqadghtlVFLpQSLV-----------------------ECtremp 534  torafugu
CDS30573      644 ----------------------pE------------------VAI-LYLL-----------------------LL----- 654  Hymenolepis m...
EFX89365      488 ----------------------rA------------------SSL-LFLL-----------------------LM----- 498  common water ...
Q16S12        725 -------IGTYIISVILKDFKNALFFPSNIRQVVSDFAVIIAIFSMSILD-Y--LT-N-VPTPK-LEVPREFKPTIPDR- 790  yellow fever ...
EFX82307      393 -------LGTVWLGVSIFNFKKTPFLSAGKREILADYALPIAVVTMSFVG-Sf-FFrE-VKAEP-FRYDD-------SEn 454  common water ...
XP_011415674  594 -------LGTLWLGVTLYNFTMTPYLNAGKRELLADYSLPVAVVIMSFFG-SyiFR-D-V------QLDSSFTPRELSLe 657  Pacific oyster
XP_001900286  762 -------FGTLWLGLFLYNFRKTPYLTRSRREWLADYALPASVLIMSFTG-AycFY-D-IEKDK-FKMRTNLST------ 824  Brugia malayi
XP_002630864  652 -------FGTLWLGLFLYNFRKTPYLTRSRREWLADYALPASVLIMSFTG-SyaFS-D-IEKDR-FNLRFEFp------- 713  Caenorhabditi...
XP_009022983  456 -------LGTAWLGLSLYNFTKTPFLNASKRELMADCALPVSVLLMSFFGsYl-FR-D-VKLKK-FKTIDGn-------- 516  Helobdella ro...
GAA52766      615 -------LGTVWLSLYLYNFTKTPFLTAGKREILTDFALPIAVLVMSTIG-Sl-LS-GnISLEPyLHSPRDLQLSL---- 680  Clonorchis si...
XP_011609196  535 ilclllmLGTLWLGYTLYLIRRSPYLNDKIREVVSDCALPISVVICSFIGsYl-FL-D-IKLPV-FSVHDGp-------- 602  torafugu
CDS30573      655 -------ACTFWICTSMLNFTKTPFLTETKRELIHDFALPSAVLVMSFVG-SflFK-R-VELTP-YKVDM-------DTf 716  Hymenolepis m...
EFX89365      499 -------FGTVWIGVSLYNFNKTPYLQAGKREALADYSLPVAVITLSFVG-SylFQ-D-VTVER-FRYDD--------Kn 559  common water ...
Q16S12        791 GWLVQPfhEKNPIWSPVLAVLPALLGTILIFMDQQITAVIINRKEHKLKKGCGYHLDLFVLALLIQLCSLMGLPWFVAAT 870  yellow fever ...
EFX82307      455 VFTVTPl-ERLPGLAIAGAMGLGFALSLLILMDQNISSAMVNTPLNNLKKGPAYHWDLFVMAILTAALSAVGLPWMHALV 533  common water ...
XP_011415674  658 VFKVVPf-HNLSVGAVFGAMGLGFCLSLLFFMDQNISAALVNAQQNKLKKGTAYHWDLLVCGVINAVLSLLAFPWVHAAL 736  Pacific oyster
XP_001900286  825 -FTVAPv-FSLPWQGYFVCLLLGFSLSFLFFMDQNITSAIVNNPQNKLKKGPAQNLDLFVVAILNCFLSVMGLPWMHGAL 902  Brugia malayi
XP_002630864  714 LIQMADi-FSLPPSGYFVCLLLGFSLSFLFFIDQNITSAIVNNNQNKLKKGTSHNLDLFVVALLNMFLSVFGLPWMHGAL 792  Caenorhabditi...
XP_009022983  517 IFTPAPl-SKLEWPAILGGMGLGFCLSLLFFMDHYIAGALVNSTDNRLKKGSAYHWDLMIIGLLNAFLSFFGLPLVHGAL 595  Helobdella ro...
GAA52766      681 ----TPl-TNLDWRAVLGALGLALPLSMLFYMEQNIASAIVNSPANRLRKSPAPHWDLMVVALINMVLSLFCLPWVHAAL 755  Clonorchis si...
XP_011609196  603 IFNYPPf-DKLSGMSALSAVGLGFLLALLIFIDQNIVISLTHVPEHKLLKGTAFHWDLMLTGFINILMSCLGLPWMHAAF 681  torafugu
CDS30573      717 KWRMAEf-HKLSWTHILVAMGLSFPLSLLFFMEQNIASVIVNSPSNKLKKGTSYHWDLFVIGVINIILSLFGLPWVHGAL 795  Hymenolepis m...
EFX89365      560 VFMVAPl-ERLSWLAVLGAMGMGFSLSLLFFMDQNITSAMVNNPCNKLKKGPAYHWDLFVVALVTAFLSLFGLPWMHATL 638  common water ...
Q16S12        871 VLSINHVNSLKQESETAAPG--EKPQFLGVREQRVTHILIFLTIGCSV-L--L-TPL-LSHIPMPVLYGVFLYMGAASLK 943  yellow fever ...
EFX82307      534 PHSPLHARALADVKERVHQGh-VYQIIVRVRETRLTVLFSHILIGLSImL--L-PYP-LAYIPPAVLNGLFLYVAVTGLG 608  common water ...
XP_011415674  737 PHSPLHVRALADVEERVDQGh-IYQIIVRVRETRLTAIFSHILIGLSL-L--I-LNY-LAYIPTPVLYGLFLYVGVTALY 810  Pacific oyster
XP_001900286  903 PHSPLHLRALADVEERVLQGh-VHEVIMNVRETRLATLIAHLLILIST-FtlL-PYP-LQWIPTSVLHGLFLYMALTSLA 978  Brugia malayi
XP_002630864  793 PHSPLHLRALADVEERVSQGh-VHEVIMNVRETRLASLIAHVMILVSM-FflI-PYP-LQLIPTSVLHGLFLYMALTSLS 868  Caenorhabditi...
XP_009022983  596 PHSPLHVRAMADVEDRVYQGh-VYLKIIKARETRVTGICSHILIGLSL-F--Y-IEE-LKKIPRPVLDGLFLYLAITALH 669  Helobdella ro...
GAA52766      756 PHSPLHIRALADIEERIDMGqhIRQTIVRVRETRLTTIISHIFIGLSL-L--M-IPIpLCYIPPAVLMGLFVYMAVTAVY 831  Clonorchis si...
XP_011609196  682 PHSSLHARQLAKVEQHVENGh-LYTTIVSVKETRLTALAANILIGLSA-F--MlPIP-LQWIPKPVLYGLFLYIAATSLD 756  torafugu
CDS30573      796 PQSPMHVRSLADMEERITVGnnVQQIVVRVRETRVATILAHIGIGLSL-Lm-L-PIP-LTYIPRPVLAGLFVYMALTSVS 871  Hymenolepis m...
EFX89365      639 PHSPLHVRGLADVEERVDQGh-VYEIIVKVRETRLTGMISHFFIGLSL-Fl-L-PYP-LAYIPTAVLDGLFLYMAVTALN 713  common water ...
Q16S12        944 GLQFFDRLMIMLMPIKYQPDYMFLRQVPIRRVHLFTLI 981  yellow fever mosquito
EFX82307      609 GNQMFERISLFFTEQSAYPPNHYIRRVPQRKIHQFTgc 646  common water flea
XP_011415674  811 GNQLFERIMLLITEQSAYPPNHYIRRVPQRTIHLFTVl 848  Pacific oyster
XP_001900286  979 GNEMFERLLLLITEQQAYPPTHYIRKVPQRKVHLFTac 1016 Brugia malayi
XP_002630864  869 GNEMFERLLLLITEQQAYPPTHYIRKVPQRKVHLFTAc 906  Caenorhabditis briggsae
XP_009022983  670 SNQLFERIMLMFTEQAAYPPNHYIRTVPQRKVHLFTll 707  Helobdella robusta
GAA52766      832 SNQLFERLLLFITEQSAYPPSHYIRRVPQRKLHLFTII 869  Clonorchis sinensis
XP_011609196  757 GNQMVDRMCLLLKEQTSYPPTHYVRRVPQRKVHFFTGV 794  torafugu
CDS30573      872 DNQLLERIKLIFIEQSAYPPSHYIRRVPQRRMHLFTgl 909  Hymenolepis microstoma
EFX89365      714 GNQMFERITLLFMEQAAYPPNHYIRRVPQRKIHQFTgc 751  common water flea
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