1OE9,1W8J,2DFS


Conserved Protein Domain Family
MYSc_Myo5

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cd01380: MYSc_Myo5 
Click on image for an interactive view with Cn3D
class V myosin, motor domain
Myo5, also called heavy chain 12, myoxin, are dimeric myosins that transport a variety of intracellular cargo processively along actin filaments, such as melanosomes, synaptic vesicles, vacuoles, and mRNA. The catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. It also contains a IQ domain and a globular DIL domain. Myosin V is a class of actin-based motor proteins involved in cytoplasmic vesicle transport and anchorage, spindle-pole alignment and mRNA translocation. The protein encoded by this gene is abundant in melanocytes and nerve cells. Mutations in this gene cause Griscelli syndrome type-1 (GS1), Griscelli syndrome type-3 (GS3) and neuroectodermal melanolysosomal disease, or Elejalde disease. Multiple alternatively spliced transcript variants encoding different isoforms have been reported, but the full-length nature of some variants has not been determined. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Note that the Dictyostelium myoVs are not contained in this child group. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Statistics
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PSSM-Id: 276831
Aligned: 55 rows
Threshold Bit Score: 988.577
Created: 1-Nov-2000
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 34 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:the residues of the P-loop wrap around the triphosphate region of the nucleotide and the N-terminal region forms the binding pocket for the nucleotide
  • Structure:1OE9; Gallus gallus myosin V binds a sulfate ion
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                     ####### ##                                          
1OE9_A         83 PAVLHNLKVRFIDSKlIYTYCGIVLVAINPYEQLP-IYGEDIINAYSGQnmg---dmDPHIFAVAEEAYKQMARDeRNQS 158  chicken
O94477         87 PSVLDALSTRYNQLQ-IYTYSGIVLIAVNPFQRLPnLYTHEIVRAYSEKsrd---elDPHLYAIAEDSYKCMNQEhKNQT 162  Schizosacchar...
O74805         79 PSVLHALHNRYNNKQ-IYTYSGIVLVSINPYQNLPeFYNDNLIKHFHKDpea---akVPHLYSIASSCYHALTTDsKNQT 154  Schizosacchar...
EFW47268      133 PAVLNCIDVRYGRGT-IYTYSGIVLVAVNPFQNMQgLYTNDMIAAYRDVpmg---hlDPHLFAVAEEAFTRMSRLsESQS 208  Capsaspora ow...
EGF77626       95 PGVLYNIQLRYAQEQ-IYTYSGIVLIAMNPFKRLN-IYTAEIMREYSGKqrd---elEPHLFAVAEQAYRNMIKEkKNQS 169  Batrachochytr...
XP_003372801   15 PDILYALKNRFEREC-IYTYFGIVLVSVNPYKDVD-LYDKSIYKLYRNGnvr---qlDPHIFGIAEEAFSSLDQQkQNQS 89   Trichinella s...
CCG84382       93 PSVLHSIRSRYERQE-IYTYSGIVLIAVNPFIKVP-LYTDAFIQQYSGRpki---dvAPHLFGIAEDAYRCMLREkKNQT 167  Taphrina defo...
EPX72489       79 PSVLQALRYRYENQH-IYTFSGIVLVSVNPYQLLSeLYNESVIKRYHENqec---tkEPHLYSIASACYSALTNDnENQT 154  Schizosacchar...
EEB07886       89 PSVLETLLNRYGQMK-IYTYSGIVLIAVNPFQHMSsLYAHEMVRAYYEKsrd---elDPHLYAIAAESYRCMNRDeKNQT 164  Schizosacchar...
CDJ12647        7 PEVLHTLKTRFCNQKdIYTYCGLLLVVLNPYKDLP-IYSADFMSAYHQNsvdseikrDPHIFAIADEALSRMKILhQNQS 85   Hymenolepis m...
Feature 1             ########                                                        ########### 
1OE9_A        159 IIVSGESGAGKTVSAKYAMRYFATVsgsas------------------eanvEEKVLASNPIMESIGNAKTTRNDNSSRF 220  chicken
O94477        163 IIISGESGAGKTVSARYIMRYFASVqaliqstdsn-------fheapqltavENEILATNPIMEAFGNSKTSRNDNSSRF 235  Schizosacchar...
O74805        155 IIVSGESGAGKTVAAKYIMRYLTSVqgvdhng--------------vvkrsvENQVLATNPIMEAFGNAKTIRNDNSSRF 220  Schizosacchar...
EFW47268      209 VIVSGESGAGKTVSAKYIMRYLATVggvdsagsma--------agahstqvvERQIMASNPLMEALGNAKTTRNDNSSRF 280  Capsaspora ow...
EGF77626      170 IIISGESGAGKTQSAKYIMRYFAIVdelgvsragsaaevagnsnlagntteiEEAVLSTNPIMEAFGNSKTSRNDNSSRF 249  Batrachochytr...
XP_003372801   90 IIISGESGAGKTVSANHVFRYLTQAcahr--------------------haiDSLIIASNSLIEAFGNAKTVQNDNSSRF 149  Trichinella s...
CCG84382      168 IIVSGESGAGKTVSAKYIMRYFATVedpekprarkti----qgtrsggmsrtEEQIIATNPIMEAFGNAKTTRNDNSSRF 243  Taphrina defo...
EPX72489      155 IIVSGESGAGKTVAARYIMRYLTSVqaldkt---------------sskrsvENQVLATNPIMEAFGNAKTVRNDNSSRF 219  Schizosacchar...
EEB07886      165 IIISGESGAGKTVSARFIMRYFASIhnasdags------------aeeftaiENEILATNPIMEAFGNAKTSRNDNSSRF 232  Schizosacchar...
CDJ12647       86 IIISGESGAGKTVSAGHVLTYLTVMtsqrccap------------cknedsmQKRVLASSPLLESLGNARTLRNDNSSRF 153  Hymenolepis m...
Feature 1                                                                                         
1OE9_A        221 GKYIEIGFDKRy-----RIIGANMRTYLLEKSRVVFQAeEERNYHIFYQLCAsaaLPEFKTlrlgnanyfhy---tkqgg 292  chicken
O94477        236 GKYIQILFDGNa-----TIIGAKIQTYLLERSRLVFQPnQERNYHIFYQILAgssSEQLEKwklvensqefny--lkqgn 308  Schizosacchar...
O74805        221 GKYVTISFDENl-----LITGANVNTYLLERSRVVSLLkGERNYHIFYQLITgctEEQRDKwflesassfny---lsqgn 292  Schizosacchar...
EFW47268      281 GKYIQIQFNASn-----RIKGASICTYLLEKSRVVFHAkEERTYHIFYQMCAgasEDDRLAwkldqvsgyry----lsqg 351  Capsaspora ow...
EGF77626      250 GKYIEIMFENKtdgpgvRITGAKIRTYLLERSRLVFQPqTERNYHIFYQLCAaapAAERKElglgsweaffy---lnqgg 326  Batrachochytr...
XP_003372801  150 GKFTRIFFDDRl-----NASGAKMEAYLLEKSRISFQGkCERNYHIFYQMSTareSTPLLKehhssykylc------sne 218  Trichinella s...
CCG84382      244 GKYIEIMFDDRa-----DIIGAKIRTYLLERSRLNFQApTERNYHVFYQLCEglpEGRKAElgltksmdfry---lnqgg 315  Taphrina defo...
EPX72489      220 GKYVTISFNEEa-----AITGANVSTYLLERSRVTSSPlGERNYHIFYQLLAgctEEQREKwhlrspsefky---lsqgn 291  Schizosacchar...
EEB07886      233 GKYIQILFNGNs-----RIIGARIQTYLLERSRLTFQPaTERNYHIFYQLLSgasNELLGSlnlasdpsmyhy--mnqgg 305  Schizosacchar...
CDJ12647      154 GKFIEVYFSQIs----nRLIRANIKTFLLEKSRVVLQNeQERNYHIFYQILAaanDPTFQNsfpilhnlhlsnfstfnys 229  Hymenolepis m...
Feature 1                                                                                         
1OE9_A        293 spvidgIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFasrds--dscaiPPKHDPLTIFCDLMGVDy-- 368  chicken
O94477        309 cstiegVNDKEEFKATVDALKTVGIDNDTCECIFSLLAALLHIGNIEVkhsrn---dayiDSKNENLINATSLLGVDp-- 383  Schizosacchar...
O74805        293 cdeisgVDDSNDFTITCRALSTIGISESRQEDVFCLLAALLHLGNIEVcatrn---eaqiQPGDGYLQKAALLLGVDs-- 367  Schizosacchar...
EFW47268      352 npvvesIDDAADYAETRKAMTTVGISSLDQQGIFQLLSTILLLGNVNIvssrradscvidSDTDVALRQACVFLGAEa-- 429  Capsaspora ow...
EGF77626      327 tgvvngMDDVAEFSITQKALSTIGISVSVQWDVFKICAALLHIGNIKIissrd---eaqiADDDPALHTAARLLGVDp-- 401  Batrachochytr...
XP_003372801  219 dacmltANDSKKFEETVNCFKILGFKDDEIREIFAVLIGILHFGNLSFsgeann-kkairKNSANDLNRCCELLGLNe-- 295  Trichinella s...
CCG84382      316 dpkiqnVDDAADFRDLCLSLDTIGVSSETQQQIWQILAAILHLGNVEIlpasasradaviAPSDKHLTKACELLGVDa-- 393  Taphrina defo...
EPX72489      292 cmsvegVNDNDEFTTTASALSTVGILENQQEEVYKLLAALLHLGNIAIvtsrs---eatiKTDDEHLCYASEILGVNs-- 366  Schizosacchar...
EEB07886      306 asnidgVNDKEEFETTVTALKTVGVSDETCSSIYSVLAALLHIGNIEVtasrn---dayvNAKEDSLKMASKLLEIDa-- 380  Schizosacchar...
CDJ12647      230 nlkdsgRDDLVGFETTMKAMLNLGFNKEEIVNVLTLLAAILHLGNVTFtetaqd-gsqidAGSEKSLSYTLRALSCEnda 308  Hymenolepis m...
Feature 1                                                                                     ####
1OE9_A        369 ---EEMAHWLCHRKLATatETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALhs-----tvKQHSFIGVLDIYG 440  chicken
O94477        384 ---SSLVKWLTKRKIKMasEGILKPLNEFQAVVARDSVAKFLYASLFDWLVATINKALmysadksnqTAKSFIGVLDIYG 460  Schizosacchar...
O74805        368 ---STLAKWIVKRQLKTrsETIITSSTLEHAISIRDSVAKYLYSALFLWIVHMINASLdhnk--vkrAAYKYIGVVDIYG 442  Schizosacchar...
EFW47268      430 ---DQLAKWLTNRMISVgkERVTKPLTQQQASDTRDAFSKLLYATLFDWVVARVNTSLkdts--vaaTTRAFIGILDIYG 504  Capsaspora ow...
EGF77626      402 ---ATFKKWIIKKQIVTrsEKIITSLNVVQATTGRDSIAKFIYSMLFDWIVRIVNLNLtre---vatKDGRFIGVLDIYG 475  Batrachochytr...
XP_003372801  296 ---EDLAEKFTYQRLAIrrEVVHRQLNSADADALKDGICKYIYESLFRWIIKKINDRLsek---splSEMNFIGVLDIYG 369  Trichinella s...
CCG84382      394 ---TLFGKWISKQSRKVmkENLESPRTAKDAIVVRDSISKFLYNSLFEWLVQSVNATLatpe--vlaRVQNFIGVLDIYG 468  Taphrina defo...
EPX72489      367 ---SELSKLLSKKMLKTrsETIVTSATYEHVLNTRDSVAKYLYSTLFSWVVHMINASLdhsk--vkrSASKHIGVVDIYG 441  Schizosacchar...
EEB07886      381 ---SKFAKWITHRNLKMrnDSIVKPLTKANAIIARDSVSKYLYACLFDWLVATINESLtssskrlneVEKSFIGVLDIYG 457  Schizosacchar...
CDJ12647      309 eieRDITSTLCHRIIRApeGDMKKSLNVQEAVYARDSLAKLIYQQLFNWIVIRCNEALnaps--epeSKENCIGILDIYG 386  Hymenolepis m...
Feature 1         ##                                                                              
1OE9_A        441 FETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPk-GS 519  chicken
O94477        461 FEHFKKNSFEQFCINYANEKLQQEFYRHVFKLEQEEYAAEGLNWSYIDYQDNQQCISMIESRLGILSLLDEECRMPt-NS 539  Schizosacchar...
O74805        443 FEHFEKNSMEQFCINYANEKLQQEFNKHVFKLEQEEYVKEGLDWRLIEYSDNQGCISLIEDKLGILSLLDEECRLPs-GN 521  Schizosacchar...
EFW47268      505 FESFQLNSFEQFCINYANENLQQQFNRHVFKLEQEEYVREEIAWSFIGFVDNQPCLDLIEAKMGILDLLEEECKLPn-GT 583  Capsaspora ow...
EGF77626      476 FEHFKRNSFEQFCINYANEKLQQEFNAHVFKLEQEEYVAEKITWSFIEFNDNQPCIDMIENKLGILDLLDEESRLPs-GA 554  Batrachochytr...
XP_003372801  370 FEIFPTNSFEQLCINFANELLQQQFYKHVFKLEQEEYVKENICWSFIDFPDNEACLLLFEARLGIFSLLDQECQLPr-PS 448  Trichinella s...
CCG84382      469 FEHFKTNSFEQFCINYANEKLQQQFTSHVFKLEQEEYVRESIPWEMIDFADNQSCIDMIEDRSTGVLSLLDEQSKLgtGS 548  Taphrina defo...
EPX72489      442 FEHFERNSLEQFCINYANEKLQQEFNRHVFKLEQEEYVREGLDWGLIDYADNQGCISLIEDNLGVLSLLDEECRLPs-GT 520  Schizosacchar...
EEB07886      458 FEHFKKNSFEQFCINYANEKLQQEFYKHVFKLEQEEYASEGLQWSYIDYQDNQPCIDMIENKLGILSLLDEECRMPt-NS 536  Schizosacchar...
CDJ12647      387 FEVMEVNSFEQFCINFANEKLQQRFVKNVFQLEQEEYMCEGLEWAFVDYYDNEPCIELFEGPMGLIPLLNDECKLPk-PQ 465  Hymenolepis m...
Feature 1                                                                                         
1OE9_A        520 DDTWAQKLynthlnk--calfekpRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKfkllpelfqdee 597  chicken
O94477        540 DENWVSKLndafskpefknsyqksRFGNKEFTIKHYALDVVYCAEGFIDKNRDTISDELLELFTNSDVpfvkdlvlfrle 619  Schizosacchar...
O74805        522 HQSFLQKLnnqlptkh-sqfykksRFNDGSFMVKHYALDVSYQVHDFLAKNSDAIPDEFISLLQNSKNefitylldfymq 600  Schizosacchar...
EFW47268      584 DDNFVQKLitahkqh---affvvpKIGKGVFTVKHYAHSVTYSVENFIEKNRDKIADELLAIVRSSSVpflsmlfseerv 660  Capsaspora ow...
EGF77626      555 DSSLITKLyqrfgtaq-skffekpRFGQQAFTIKHYACDVTYEIEGFIDKNKDTVADEQLSMLNESSFeflrevtkieev 633  Batrachochytr...
XP_003372801  449 DNNFYNELknskqcre-scsfklpAIAGDEFLVVHYAGTVKYCVRDFVKKNLDTVNESFNEVLRNSRNcflvqllqa--- 524  Trichinella s...
CCG84382      549 DEVFRQTLvdklkgn---snfeapKLKKSSFTVKHYALPVTYESEGFLEKNRDTVSEQHLEALIASDNsfvrevltialg 625  Taphrina defo...
EPX72489      521 DGSFLQKLnnqapqkh-plfykksRFSDGSFTIKHYASDVTYQAHDFLAKNSDSLPVEIINLLKSSDNqfvaylldfgtq 599  Schizosacchar...
EEB07886      537 EKNWVSKLnshftkdpyknsykqsRFSETEFTIKHYALDVTYNAEGFIDKNKDTISEELIDLLNSSKNsfltdllsfran 616  Schizosacchar...
CDJ12647      466 DNNWLARIcnehlgrs-rnfsqskLWAKTRFIVQHFSEAVEYTVEGFVEKNLDRIIPEHVNILVHSENqilkemmkdfeg 544  Hymenolepis m...
Feature 1                                                                                         
1OE9_A        598 kaisptsatpsgrvplsrtpvkpakarpgqtskeHKKTVGHQFRNSLHLLMETLNaTTPHYVRCIKPNDFKfPFTFDEKR 677  chicken
O94477        620 qt-------------------appadtkkiktkpKSNTLGSMFKSSLVSLMSTINeTNAHYIRCIKPNEEKeAWKFDNQM 680  Schizosacchar...
O74805        601 lv-------------------ssqnknprktaisRKPTLSSMFKSSLSQLMTTVSsTNVHYIRCIKPNEEKlPWTFSPPM 661  Schizosacchar...
EFW47268      661 aaaaa------------aastalkgtekgrsnasKLSTVGSQFRASLAVLMDTIYhTNTHYVRCIKPNMAKePFVFDRIH 728  Capsaspora ow...
EGF77626      634 pep----------------eqkqsaapgrraatsKKATLGSIFKGSLVQLMDTIRqTEVHYIRCIKPNQAKvAFEFEAPM 697  Batrachochytr...
XP_003372801  525 -------------------------gscpqlqksSKRTVGSQFRKSLSTLMDTLNsTNPHYVRCIKPNDEKlPFTFNNAR 579  Trichinella s...
CCG84382      626 pdy-----------------sapdagtrkpgkasRKPTLGAIFKNSLIQLMETIGsTNAHYIRCIKPNEAKsAWVFEPRM 688  Taphrina defo...
EPX72489      600 sv-------------------daqngatkkrinnKKPSLTSMFRTSLSHLMHTISaTNVHYIRCIKPNEEKsSWSFSSPL 660  Schizosacchar...
EEB07886      617 q--------------------atsvvskarnarpRNPTLGAMFKASLIGLMDTINeTNAHYIRCVKPNEAKaAWEFDSNM 676  Schizosacchar...
CDJ12647      545 ----------------------anngvgkhqgifTKPTVITQFSESLKSLMEILNsTTCHYVRCIKPNDEKaPFTFCPER 602  Hymenolepis m...
Feature 1                                                                                         
1OE9_A        678 AVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQkdvlsdrkqt-------cknvlekliLDKDKYQFGKTKIF 750  chicken
O94477        681 VVSQLRACGVLETIKISCAGFPSRWTFDEFVSRYYMLVPSavrtteslt--------fskailekhADPTKYQIGKTKIF 752  Schizosacchar...
O74805        662 VLSQLRACGVFETIRISSLGFPARFSYEEFAHRFRILLSSkeweednkkl------tlnivnsvipHDNLNFQVGRSKIF 735  Schizosacchar...
EFW47268      729 VLEQLRACGVLETIRISAAGYPSKMTYAEFRERYRPFLTRqqavnnkanlevakireacslilnstFDAEQFQLGKTKIF 808  Capsaspora ow...
EGF77626      698 VLSQLRACGVLETIRISCAGYPNRQTFQEFSQRFYFLVRSvdwvadpkql-------tetivkgliSDEDKYQIGLSKIF 770  Batrachochytr...
XP_003372801  580 TIQQITACSLLETLKISAAGHPTRWKYESFFERYFLLLTMkerneqsttls-----ekcrqicerfLNNENFEFGSTKIF 654  Trichinella s...
CCG84382      689 VMSQLTACGVLETIRISCAGFPSRWSFLELGERYYSLIPSthweqledhks-----lselilqkcvPDSSRYQIGLTKIF 763  Taphrina defo...
EPX72489      661 VLSQLRACGVFETIRISSLGFPKRYFYDEFTKRFRVLVSSrdwnqdskkls----lhiistvlpntNSADYFQFGKSKIF 736  Schizosacchar...
EEB07886      677 VLSQLRACGVLETIRISCAGFPSRWTFKDFTERYYMLVKStnwtketnk--------lcqllldetVEPEKYQIGTSKIF 748  Schizosacchar...
CDJ12647      603 VMQQLRACGVLQTVKISAAGYPSRCSYEDFLSRYWQLSPQgfsrrddpik------qseliiknilEDSSKYRLGKTKIF 676  Hymenolepis m...
Feature 1           
1OE9_A        751 FR 752  chicken
O94477        753 FR 754  Schizosaccharomyces pombe 972h-
O74805        736 FR 737  Schizosaccharomyces pombe 972h-
EFW47268      809 LR 810  Capsaspora owczarzaki ATCC 30864
EGF77626      771 FR 772  Batrachochytrium dendrobatidis JAM81
XP_003372801  655 FR 656  Trichinella spiralis
CCG84382      764 FK 765  Taphrina deformans PYCC 5710
EPX72489      737 FR 738  Schizosaccharomyces octosporus yFS286
EEB07886      749 FR 750  Schizosaccharomyces japonicus yFS275
CDJ12647      677 LG 678  Hymenolepis microstoma

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