Conserved Protein Domain Family
NHL_TRIM32_like

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cd14961: NHL_TRIM32_like 
NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
The E3 ubiquitin-protein ligase TRIM32 (HT2A) is widely expressed and is responsible for ubiquinating a large variety of targets, including dysbindin (DTNBP1), NPHP7/Glis2, TAp73, and others. TRIM32 promotes disassociation of the plakoglobin-PI3K complex and reduces PI3K-Akt-FoxO signaling. Mutations in TRIM32 have been implemented in the two diverse diseases limb-girdle muscular dystrophy type 2H (LGMD2H) or sarcotubular myopathy (STM) and Bardet-Biedl syndrome type 11 (BBS11). The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.
Statistics
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PSSM-Id: 271331
Aligned: 27 rows
Threshold Bit Score: 239.1
Created: 21-Mar-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Feature 1:NHL repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #######  #####################     #######                          
Q8CH72        364 GAKGStpGMFNLPVSLYVTs-QSEVLVADRGNYRIQVFNRKGflkeiRRSPSGIDSfvlsflgadlpnlTPLSVAMNCHG 442  house mouse
NP_001107066  371 GCKGNlpGMFNLPVSICVTl-QGEVLVADRGNYRIQIFNRKGfqreiRRNPSSIDNfvlsflgadlpnlIPLSIAITAQG 449  zebrafish
XP_002740390  592 GRTGVndAEFNIPIGVTVDk-KGNVLVADAANKRIQILESNGk----YIDQIRVDIp------------HTSGVAMAPND 654  Saccoglossus ...
XP_006825513  782 GRTGVnnEEFNIPIDVSVNk-KGNVLVADAGNKRIQILDSNGk----YIGHILVDLp------------HISGVAMAPNG 844  Saccoglossus ...
ESO91335      419 GSRGSgiDNLNQPVRIASGp-NGLIFVLDTGNSRIKIINSDGqv-ekHIGPIGLENq------------SATGLCLMNEG 484  owl limpet
XP_002741510  476 LTVGD--GKLSEPNGVVVNrrTGTLYVTDSRDKKVVTLSLDDp---dDISEFNLPFg------------QLYDITLDHDG 538  Saccoglossus ...
XP_006561120  446 GRRGNgkDEFHQPVAVAVDd-DGMIYILDTGNSRIKVLNYDLef-qrHITNEGLEGr------------SCTGIGISQQG 511  honey bee
XP_005113065  218 GSRGTgqEQLNQPVRIAAGaeGDVVYVLDTGNSRIVVLGRDGsv-lrHLGPAGVEQq------------SATGLSVMSSG 284  California se...
XP_005746304  605 GKQGSgrADLTLPSGIHATp-QGQLFIVDCGNARIQVTDARGnvlqqVTSPTAGGSdrr--------crNYFDIAVNAKG 675  Pundamilia ny...
XP_002733628  395 GKRGSgpGEFCDPEGVAVTn-AGDIVVADKGNSRLQIFDSLGny--kFQSPAHMYK-------------TPTDVAVNPDN 458  Saccoglossus ...
Feature 1                                                                                         
Q8CH72        443 LIGVTDsYDNSLKVYTMDGHc---VACHRSQLs------KPWGITALPS-GQFVVTDvEGGKLWCFTVDRga--gVVKYS 510  house mouse
NP_001107066  450 LIGVTDnYDNSVKVYTTDGHc---IACHKNQLi------KPWGIAAMPS-GQFVVSDvEGGKLWCLAVDRnv--gVVNYN 517  zebrafish
XP_002740390  655 NIVVVEwETRHVHIYNENRKki-kHFTYKEFV-------KPFGITVNSK-GHILVADpGASYIFVFTSDGdf--iMKIGE 723  Saccoglossus ...
XP_006825513  845 NIVVVEwETKHVHVYNENREki-kQFTYKEFV-------KPYGITVNSK-GHILVADpEASYIFMFTSDGdfimkIGKEE 915  Saccoglossus ...
ESO91335      485 NLAVINwRSKQVSIITPEGElv-rQFTTTEFV-------EPTDIAVNSR-GEIIVADsGASKIFIFGSAGn----LITTF 551  owl limpet
XP_002741510  539 NLVLSEqETNSVHIYSTDGEk--lLTVENDQMr------KPVGVAVDRE-SNILVADnEANCIFVFDRRGgllqrIGSGG 609  Saccoglossus ...
XP_006561120  512 IVVVNW-RTRKITEMSSLGDti-kSFSHNAFQ-------EPIDVAVDRSyGHILVADnGQSCVFVFDSDGk---iLFQVG 579  honey bee
XP_005113065  285 QLVVINwRSKMVSVLSPEDGslvrSFTTPGFV-------EPIDVAVNSR-GEVVVADsGAKKIFKFDTSGnlvttFGSHG 356  California se...
XP_005746304  676 LIAVSCaAERALLVFSRHGRll-qTFGGSGFSsakdeleAPRGVTVTRL-DEFLVADiRKGTLIALKLDPkt-gsRLERT 752  Pundamilia ny...
XP_002733628  459 DFVVVDyGLRCIRITSPDKCh---VTIRKTDSs-----dSPKSPVDDDF-WNYLHGI-TVDRIGHVVVSS-----SCHEQ 523  Saccoglossus ...
Feature 1                                                                                         
Q8CH72        511 CLCS--AVRPKFVTCDAe-GTVYFTQglglnv-enrqnEHHLEGGFSi-gSVGPDGQLGRQishffs--enedfrCIAGM 583  house mouse
NP_001107066  518 RLCS--AVRPKFVTCDSs-GTVYFTQglglni-enrhnEHHLEGGFSi-gSVGMDGQLGKQlshffs--etedfrCITGM 590  zebrafish
XP_002740390  724 DVGEgeLYQPAFVVATRn-NDVIVSDs-----------KHGLKFFTEggkYIHGIHQIGDDek----------lyDCSGV 781  Saccoglossus ...
XP_006825513  916 GEGK--LNNPHFVATGRk-DDVIVSDs-----------RHGLALFTQrgqFKRGIHQIGDDdk----------lyDSNGV 971  Saccoglossus ...
ESO91335      552 GSKG--IKDGQFKLISS--VTVGKCDeif-------vtDHRIQVFSKdgkFSRCLSDSGKG--------------QYGGI 606  owl limpet
XP_002741510  610 DKPDq-LKDISFIALDRa-GNIHVSNt----------gHQRITVYTGignFLRNISVSGHGrgk---------ltNPTGI 668  Saccoglossus ...
XP_006561120  580 KRST--FKLITSVTVGP--NGEIIVA------------DSRIQVFSAkgdFSEEIYSEGKGk------------gTYGGL 631  honey bee
XP_005113065  357 DKDGq-FKVISGLCVGKn-DEILVADhriqiftkdgkySRKLVDPGSgsyGGIAVDSAGNVlatktekssksdrnSGAGP 434  California se...
XP_005746304  753 VVTG--FHRPYLVAACLssGMVAVSErg--------neTGRVPCVKVlepGWNTVRVFGVCagmg------pvltCPWGI 816  Pundamilia ny...
XP_002733628  524 SHIR--VFTPYGTEICRi-GEKDKLDrifym--ctdssNENILVSNHgkrPLRKYDIRGREiwstn-----lpghFITGI 593  Saccoglossus ...
Feature 1                                                                                         
Q8CH72        584 CVDARGd-LIVADSSRk----------EILHFPKg-GGYSVLIRe-----GLTCPVGIALTpKGQLLVLDCWDHCVKIYS 646  house mouse
NP_001107066  591 CVDSNGd-LIVTDSGRk----------EILQFPKe-GGYNILIQe-----GLTCPVGVAVTqKGQLLVLDCWDHCVKVYT 653  zebrafish
XP_002740390  782 AVDSDYn-IIVADRAStp--------nRILVLTYdgSVIQSLESqh---hKLSRPHGVAVTeDGYVIVADYGNDCIKKYK 849  Saccoglossus ...
XP_006825513  972 AVDSHYn-IVVADQGStp--------nRILVLTYfgTVIQCLESqh---nKLSSPHGVAVTqDGYVIVADANNDCIKKYK 1039 Saccoglossus ...
ESO91335      607 VVDNGGl-LLATKTEKgrs------fvQVMIMNSngKLHNIIDSne---eKLKRPSGIAILpNFHVVVADLGNDCVKKYR 676  owl limpet
XP_002741510  669 ASASGL--LFVADDAD-----------DVIQIYTt-EGAFVAKLdse-ddVLSGPQGVSITgDGSIAVVDRGNQCVKMYQ 733  Saccoglossus ...
XP_006561120  632 AVDAEGr-ILGTRTDKg---------rSIIQVLKl-GGGNILTEidshssKLRRPSGIAVLpDNHLVVVDLGNDCIKKYR 700  honey bee
XP_005113065  435 SSSSSSssSSAKEKGSgggggssgggrSFVHVFH--SNGKLLYSidshsdRLRRPSGLAVLtDYRIVVADLGNNCVKKFY 512  California se...
XP_005746304  817 CIDPDGn-VLVADWGEq---------hRILLYPAqgVGWPIINQ------GLSSPRGLSLLpDGQLAVSDSMHHCIKIYQ 880  Pundamilia ny...
XP_002733628  594 CCDDLDn-MLTVSYRTg----------QILLVHKdgTPGGILAE------GLSHPEGIAFTkDKKLVVVDGGHNRVKVYQ 656  Saccoglossus ...

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