1XB2,1AIP,1EFU,2CP9,3MMP


Conserved Protein Domain Family
UBA_EF-Ts

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cd14275: UBA_EF-Ts 
Click on image for an interactive view with Cn3D
UBA domain found in elongation factor Ts (EF-Ts) from bacteria, chloroplasts and mitochondria of eukaryotes
EF-Ts functions as a nucleotide exchange factor in the functional cycle of EF-Tu, another translation elongation factor that facilitates the binding of aminoacylated transfer RNAs (aminoacyl-tRNA) to the ribosomal A site as a ternary complex with guanosine triphosphate during the elongation cycle of protein biosynthesis, and then catalyzes the hydrolysis of GTP and release itself in GDP-bound form. EF-Ts forms complex with EF-Tu and catalyzes the nucleotide exchange reaction promoting the formation of EF-Tu in GTP-bound form from EF-Tu in GDP-bound form. EF-Ts from Thermus thermophiles is shorter than EF-Ts from Escherichia coli, but it has higher thermostability. The mitochondrial translational EF-Ts from chloroplasts and mitochondria display high similarity to the bacterial EF-Ts. The majority of family members contain one ubiquitin-associated (UBA) domain, but some family members from plants harbor two tandem UBA domains.
Statistics
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PSSM-Id: 270461
Aligned: 127 rows
Threshold Bit Score: 48.1574
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
polypeptide
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:polypeptide substrate binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1           ##  ##     ##  #                   
1XB2_B          6 ELLMKLRRKTGysFINCKKALETCgGDLKQAESWLHK 42   cattle
NP_608891       9 ALVEQVREVTAcsMDEAKYYLSACaNDVSAAVALFFE 45   fruit fly
XP_001743787 1434 AHVKKLREQTAlpMKLCREALEASnDNVDAALQWLQD 1470 Monosiga brevicollis MX1
XP_002390425   28 QLVSELRKLTNapIMKARQALTETsNDFDAALKWLEQ 64   Moniliophthora perniciosa FA553
XP_002772754   43 ALVQELRKRTGasISKCRDALADEgGDVEKAMTWLKK 79   Perkinsus marinus ATCC 50983
EGD83008       32 GNIKELRKRTDlpMKLCRQALAESsDDVNAAMEWLKN 68   Salpingoeca sp. ATCC50818
CCA67744       46 ALVQQLRKETScsIQKAIQALSTTsNDYQKAVEWIQA 82   Piriformospora indica DSM 11827
EIW86989       31 QLIGQLRKRTEvsISKAREALTATnNDVDAAFDWLEK 67   Coniophora puteana RWD-64-598 SS2
EJD54403       25 KLIAELRKATNvpMNKASEALAACnNDLAAAVAWLEE 61   Auricularia delicata TFB-10046 SS5
ELT92766       36 SPLVKLRKKTGfpVGKCKDALSKFnNNFQEAEQWLRK 72   Capitella sp. I Grassle & Grassle, 1976

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