Conserved Protein Domain Family
COG5354

?
COG5354: COG5354 
Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Statistics
?
PSSM-Id: 227657
Aligned: 5 rows
Threshold Bit Score: 606.102
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1723669    1 MS--SQFFLKTSQDIELFQSYPTFEQSNTNS--KDFPVISSVLSPCGRFLALSTKENVKVFTGPCLDnVLLTMKLSDVYD 76  baker's yeast
19074867   1 MV--SVVPVDYSAVLQRFCLPQSEVIHTRFG--PLMPVAAHSESGLSFDVFAEDAAWIECDYYSLKAsKVVWTRNNQVKY 76  Encephalitozoon cun...
1723536  160 YYgrDQFISYYGNRVSVNWNRKSDVPEQIVDr-ENWTETYVQWSPMGTYLVSLHLRGIQLWGGESWG-MCARFLHPYVKF 237 fission yeast
19113213   3 QK--SQFAYRSSKSIGLVNASENYASPPKFEa-ISEPARNACYSPNGKLFAYATATQVVINDTESGA-KLTQLPAANTYE 78  fission yeast
115936   196 DKvrDQFVLQDDVKTSVFWNSMFNEEDSLVEsrENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFD-RLRRFYHPDVRN 274 baker's yeast
1723669   77 LHFSPAGNYLSTWERASIQ-----DPNHKNVKVWYLN---KPFKKDCVSEDIVPAYEYQAKS-------QSGW-FLQFSK 140 baker's yeast
19074867  77 YDLKEERMILEMEMDRPR--------EIEISDNGS-----NVGVLNGKGEMIVFGRNGISLR---------MQnVSKFRI 134 Encephalitozoon cun...
1723536  238 VDFSPNEKYLVSWSYEPVRlppigHPARETMPFTDDDegkHCFVWDIASGRILRSFKIPPQPegskdgkKVIWpIFKWSA 317 fission yeast
19113213  79 LGFSPLGKYLSTWERPGK--------EADGTPKQN------MKVWNTETGQLVFSFVQRNQT---------GW-NLQYTC 134 fission yeast
115936   275 SSVSPNEKYLVTFSTEPIi----vEEDNEFSPFTKKNeghQLCIWDIASGLLMATFPVIKSP-------YLKWpLVRWSY 343 baker's yeast
1723669  141 LDNYGLRL-FKHDLKIVKLsSANADnfdfQSPFAVLSddetSQHFTTYLISPA--------EHPT----ICTFTPEKGGK 207 baker's yeast
19074867 135 SDLLVAYV-SSSSFYIHQIdGDRIE----EHPFHNSR-----VSMLEFSISGE----------------FVFLATKKLEK 188 Encephalitozoon cun...
1723536  318 DDKYLARVtVGQSISVYE--TPSLA----LVDKKTIK----IDGVQNFEWCPVsda--lgrDSKEq--lLAYWTPEITNQ 383 fission yeast
19113213 135 DESLAARL-VTNEVHFYE--TGNMS----KGPIAKLR----VEGISDFALSPGq-------NHAV-----AVFIPEKKGA 191 fission yeast
115936   344 NDKYCARM-VGDSLIVHDA-TKNFM----PLEAKALK----PSGIRDFSFAPEgvklqpfrNGDEpsvlLAYWTPETNNS 413 baker's yeast
1723669  208 PAQLIIWALSegkITKKIASKTFFKADSCQLKWNPLGNAILCLAITDFdSSNKSYYGENTLYLLSFQgvngtlgGNSVRV 287 baker's yeast
19074867 189 DGMHRVLRIG---KNTVEVLHSLKELQGFSLKTHVSNKYTLLLLMTSY--VNNSYFAESELYLYDTE-------KRSFKG 256 Encephalitozoon cun...
1723536  384 PARVALISIP---SKSTIRTKNLFNVSDCKLYWQSNGDYLCVKVDRHT-KTKKSTF--SNLEIFRIR-------EKNIPV 450 fission yeast
19113213 192 PASVRTYSIPn--FNSPLSQKTFFKADKVQFKWNALGTSLLVLTQTEVdKSNKNYYGETNLYLLGITg------QFDCRV 263 fission yeast
115936   414 ACTATIAEVP---RGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHT-KSGKTQF--SNLQICRLT-------ERDIPV 480 baker's yeast
1723669  288 S--LTTGPVHDFTWSPTSRQFGVIAGYMPATISFFDLRGN-VVHSLPQQAKNTMLFSPSGHYILIAGFGNLQGSVEILDR 364 baker's yeast
19074867 257 L--G-YSPVHSYTF--LSSGFAVCHGPQPSSVSVHGLDGK-LRYNFPEGTRNRIFFNQHENIAVFAGFDNLSGDIEVFHV 330 Encephalitozoon cun...
1723536  451 EvvDLKDVVLNFAWEPKSDRFAIIS-ANDQVLNSTNVKTN-LSFYGFEQKKNTPS---TFRHIIT--FDKKTCNSLFMAP 523 fission yeast
19113213 264 Dl-DREGPIHDVCWNADSKEFGIVYGYMPAKTAIFDNRAN-VVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDA 341 fission yeast
115936   481 EkvELKDSVFEFGWEPHGNRFVTIS-VHEVADMNYAIPANtIRFYAPETKEKTDV---IKRWSLVKEIPKTFANTVSWSP 556 baker's yeast
1723669  365 LDKFKCVSKFDATNTSVCKWSPGGEFIMTATTSPR---LRVDNGVKIWHVSGSLVFvkefkELLKVDWRSPcnyktlenk 441 baker's yeast
19074867 331 PSRKLMA-RFNVLGASLVDWKESGSYFYVSTTSYF----QEDNKITLYDYYGRKVD------------ER---------- 383 Encephalitozoon cun...
1723536  524 KGRFMVA-ATLGSSTQY-----DLEFYDLDFDTEK---KEPDALANVQQIGSAEHF-----GMTELEWDPS--------- 580 fission yeast
19113213 342 ANNMKKITTVEAANCTYCEFSPDSQFLLTAVTSPR---LRVDNSIKIWHITGAPMFyeefnELYQAFWRPRpln------ 412 fission yeast
115936   557 AGRFVVVGALVGPNMRRS----DLQFYDMDYPGEKninDNNDVSASLKDVAHPTYS-----AATNITWDPS--------- 618 baker's yeast
1723669  442 deaffenhiinnwepLPDSTTSSLDPkisnkselqihssvqeyisQHPSREAssn--gnGSKAKAGGAYKPPHARrtGGG 519 baker's yeast
19074867 384 ----------------QFKSLFSACG-------------------------------------------YGEEER----- 399 Encephalitozoon cun...
1723536  581 ---------------GRYVTTSSTIW-------------------RHKLENG-------YRLCDFRGTLLREEMI--GEF 617 fission yeast
19113213 413 ------------ptlLQNALTSASLP-------------------SPPTPHAsasklaaKPSVKPAGAYRPPGAR--GQN 459 fission yeast
115936   619 ---------------GRYVTAWSSSL-------------------KHKVEHG-------YKIFNIAGNLVKEDII--AGF 655 baker's yeast
1723669  520 RIVpgvppgAAKKTIPGLVPGMSANKDANTKNRRRRANKKSSETSPDSTPAPSAPASTNAPTNNKETSPEEkKIRSLLKK 599 baker's yeast
19074867 400 --F-------VELEKPEKLTIEKQEKYVPPSIHTFVP--KAVS-------RSSGPRKKEPVEQKPRRSRDD-----LLNV 456 Encephalitozoon cun...
1723536  618 KQF------IWRPRPPSPLTKEDMKKIRKKLKDYNRLFDEEDIAEQSSANRELAARRRQLISEWQKYRDEV---IARVAE 688 fission yeast
19113213 460 STF------SYRREEIDVMSSGSANKHVNSSRQRVVPGATPVIDGNKKNNKKTKPAVKQVAQPTAEVSDEK-KIRSLCKK 532 fission yeast
115936   656 KNF------AWRPRPASILSNAERKKVRKNLREWSAQFEEQDAMEADTAMRDLILHQRELLKQWTEYREKIgQEMEKSMN 729 baker's yeast
1723669  600 LRAIETLKERQAVGDKLEDTQVLKIQTEEKVLKDLEKLgwKDE 642 baker's yeast
19074867 457 LREIEALKDRMRSGEELSVKELNLILKEPRLKSELKGL--VE- 496 Encephalitozoon cuniculi
1723536  689 ERAITGQPAITVPAEEEEIIQ----ETVEEVISEEIEP--VED 725 fission yeast
19113213 533 LRAIDDLKSRLNNNEKLEATQVKKIESEGKVLAELKALgwTPD 575 fission yeast
115936   730 FKIFDVQPED--ASDDFTTIE----EIVEEVLEETKEK--VE- 763 baker's yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap