Conserved Protein Domain Family
Fmt

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COG0223: Fmt (this model, PSSM-Id:223301 is obsolete and has been replaced by 439993)
Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 223301
Aligned: 64 rows
Threshold Bit Score: 187.053
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
418345    29 PLNVLFFGSDTFSNFSLQALNElrqnngsCGiVDNIQVVTRSPKWCGRqKSILKYPPIFDMAEKLQLPrpitcdtkqeML 108 baker's yeast
2496478    1 --MTILILTDNVHAHALAVDLQ-------AR-HGDMDVYQSPIGQLPG-------VPRCDVAER---------------- 47  Mycobacterium tuber...
2496478    1 --MTILILTDNVHAHALAVDLQ-------AR-HGDMDVYQSPIGQLPG-------VPRCDVAER---------------- 47  Mycobacterium tuber...
15598750   2 TSKAVVFAYHDIGCTGIEALLN-------AG-YEIAAVFTHADDPREN----TFYASVARLCAERGIP----------LH 59  Pseudomonas aerugin...
17546039   2 TRRAVVFAYHNVGVRCLRVLAA-------RG-IQIELVVTHEDSATEN----IWFGSVRATAQELGIP----------FV 59  Ralstonia solanacearum
16264487   1 -MRIVFVGAVESSKIALDALIR--------AkRTPVLVITLPPEAAGRhSDFVGLGEIGRAAGSA-------------IH 58  Sinorhizobium meliloti
6136698    1 -MKAVIFAYHDMGCQGVQAVLD-------AG-YEIAAIFTHADNPAEN----TFFGSVSRQAAELGIP----------VY 57  Salmonella typhimurium
14582789   1 -MKAIVFAYHDIGCVGLNALAE-------AG-YDIQAVFTHTDNPGEN----RFFSSVARVAADLALP----------VF 57  Yersinia pseudotube...
15606408   1 -MRILFLSYR-FNSLSQRLYCE----------------LTEREHEVSV---ELDVHPDLTVEAA-E------------LY 46  Aquifex aeolicus
6176575    1 -MKTVVFAYHDMGCLGIEALLA-------AG-YEISAIFTHTDNPGEK----AFYGSVARLAAERGIP----------VY 57  Escherichia coli
418345   109 ALSKLTPSrQGNPENDGSgaPFNAIIAVSFGKLIPGDLIRAVP-LALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQT 187 baker's yeast
2496478   48 ----------VAEIVERY----DLVLSFHCKQRFPAALIDGVR--CVNVHPGFNPYNRGWFPQVFSIIDG-QKVGVTIHE 110 Mycobacterium tuber...
2496478   48 ----------VAEIVERY----DLVLSFHCKQRFPAALIDGVR--CVNVHPGFNPYNRGWFPQVFSIIDG-QKVGVTIHE 110 Mycobacterium tuber...
15598750  60 APEDVNHP-LWLERIRQL--RPDFLFSFYYRRLLGAELLACAArGAYNLHGSLLPRYRGRAPANWVLVNGETQTGVTLHR 136 Pseudomonas aerugin...
17546039  60 TPEDARGE-DLFARIAAI--APDFIFSFYYRHMIPVRLLGLARhGAFNMHGSLLPKYRGRVPTNWAVLHGETESGATLHE 136 Ralstonia solanacearum
16264487  59 HTTDINSQ-ATLEAVAAA--TPDLSLVIGWSQVCRQAFREIARaGTVGFHPAALPRLRGRGVIPWTILRGEERTGSTLFW 135 Sinorhizobium meliloti
6136698   58 APDNVNHP-IWVDRIAEL--APDIIFSFYYRNLLSEEILHLAPaGAFNLHGSLLPAYRGRAPLNWVLVNGESETGVTLHR 134 Salmonella typhimurium
14582789  58 APEDVNHP-LWVERIREL--QPDIIFSFYYRNMLSDEILSLAPqGGFNLHGSLLPQYRGRAPINWVLVNGETETGVTLHQ 134 Yersinia pseudotube...
15606408  47 KP--------------------DLIIAPFLKRKIPQEVWKKYK--TLIIHPGP-PGDRGPNALDWAIMKGERIWGVTLLE 103 Aquifex aeolicus
6176575   58 APDNVNHP-LWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPaGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHR 134 Escherichia coli
418345   188 LHPDrFDHGAIVAQTEpLAIATMLSKGRVNDSTADFNSEGLPRRTAILMDQLgalgaqllgqtlrerlylpqNRVQAPTA 267 baker's yeast
2496478  111 IDDQ-LDHGPIIAQRE-CAIESWDSSGSVYARLMDIERELVLEHFDAIRDGSy-------------------TAKSPATE 169 Mycobacterium tuber...
2496478  111 IDDQ-LDHGPIIAQRE-CAIESWDSSGSVYARLMDIERELVLEHFDAIRDGSy-------------------TAKSPATE 169 Mycobacterium tuber...
15598750 137 MIER-ADAGPILAQQA-VAIDPEDTALSLHGKLRKAAGALLRDSLPLLALGV--------------------LPEVEQDE 194 Pseudomonas aerugin...
17546039 137 MVEK-PDAGYIVDQTI-VPILPDDTAHEVFEKTTVAAEQTLWRVLPDMIAGR--------------------IPQRPNRL 194 Ralstonia solanacearum
16264487 136 LDDG-IDSGPILLQRQ-FPVAPDETARSLYTKHTENLAEMVVEAAAQVEAGS--------------------AARMEQNE 193 Sinorhizobium meliloti
6136698  135 MVKR-ADAGEIVASQR-VAIAQDDVALTLHHKLCQAARQLLNSILPTMKCGD--------------------IPSVPQRE 192 Salmonella typhimurium
14582789 135 MVKK-ADAGPIAGQYK-VAISDVDTALTLHAKMRDAAQELLRNLLPRMKEGP--------------------LPLTPQKE 192 Yersinia pseudotube...
15606408 104 ASEE-YDAGDVWAYRT-FPMRFARKASIYRNEVTEGVVECVLEALENFERGD--------------------FKPTPQKE 161 Aquifex aeolicus
6176575  135 MVKR-ADAGAIVAQLR-IAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGN--------------------ILEIAQRE 192 Escherichia coli
418345   268 YKPSYAHRITTED-KRIHWARDsAAELLNKLETLG--PLHAFKEATAArkdaqnsvlKRILFHECKVMRDARLdngSKPG 344 baker's yeast
2496478  170 GNLNLKKDFEQLRrLDLNERGT-FGHFLNRLRALThdDFRNAWFVDAS----------GRKVFVRVVLE---------PE 229 Mycobacterium tuber...
2496478  170 GNLNLKKDFEQLRrLDLNERGT-FGHFLNRLRALThdDFRNAWFVDAS----------GRKVFVRVVLE---------PE 229 Mycobacterium tuber...
15598750 195 SQASHFGRRTPAD-GLLDWHRP-ARQLYDLVRAVTq-PYPGAFCQVGE---------QKLIVWSAEVVAGNHG---REPG 259 Pseudomonas aerugin...
17546039 195 EDGSYFGGRKPED-GRIDWSRP-AQQVYNLVRAVAp-PYPGAFTDAGG---------ERYIVARARLARQSFSn--LPPG 260 Ralstonia solanacearum
16264487 194 AEASYCAKRTAED-GRIDWHDP-AASILRLIRAAGd-PYPGAFTFYKG---------QKIRIDAATPVENSRQy-iGLKG 260 Sinorhizobium meliloti
6136698  193 SDSTYYGRRRPED-GLIDWHKP-VSTVHNLVRAVAa-PWPGAFSYNGS---------QKFTIWSSRMCPDAQG---ALPG 257 Salmonella typhimurium
14582789 193 ADASYFGRRTAAD-GEIHWQKS-AFTINNLVRAVTe-PYPGAFSYLGQ---------RKLTIWRSRPLDLVHN---KLPG 257 Yersinia pseudotube...
15606408 162 H--WWNPKMEQEL-RRVDWEQDdTKTVLRKVYASD--SQPGASSKVLG---------KEVLLFNAYPEEELK----GKPG 223 Aquifex aeolicus
6176575  193 NEATCFGRRTPDD-SFLEWHKP-ASVLHNMVRAVAd-PWPGAFSYVGN---------QKFTVWSSRVHPHASK---AQPG 257 Escherichia coli
418345   345 MFKYDDIkDCILVTCrGNLLLCVSRLQFEGFAVERAGQFMARCG-KDAAP 393 baker's yeast
2496478  230 KPAEA--------------------------------------------- 234 Mycobacterium tuberculosis
2496478  230 KPAEA--------------------------------------------- 234 Mycobacterium tuberculosis
15598750 260 SVLSCD---PLRIAC-GEDSLVLRFGQRGERGLYLAGTQLATELgLVEGA 305 Pseudomonas aeruginosa PA01
17546039 261 -LHVVDN--AMFGVCgDGGAIAIHELWRVEPQAPSTTTVVTAQQ-LANRL 306 Ralstonia solanacearum
16264487 261 QIQAHTE-RGFIVLCgDGECIEAHAWAWASDRRPPNHGKLGGSD-LVQAS 308 Sinorhizobium meliloti
6136698  258 SVISVS---PLRVAC-ADGALEIITGQ-AGDDITVQGSQLAQTLgLVAGA 302 Salmonella typhimurium
14582789 258 TVLSTA---PLTVAC-GEGALEIITGQ-GEAGLYVQGDRLAQEMgIVTDV 302 Yersinia pseudotuberculosis
15606408 224 EVLALRD-EAVCIGT-RDGAVWITHMRERKKESIKLPSARVLGe-FLKGV 270 Aquifex aeolicus
6176575  258 SVISVA---PLLIAC-GDGALEIVTGQ-AGDGITMQGSQLAQTLgLVQGS 302 Escherichia coli
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