Conserved Protein Domain Family
Reelin_repeat_1_subrepeat_1

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cd10037: Reelin_repeat_1_subrepeat_1 
N-terminal subrepeat of tandem repeat unit 1 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the N-terminal subrepeat, which directly contacts the C-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197345
Aligned: 6 rows
Threshold Bit Score: 269.422
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     ##                ## #   ####                               ##      
P78509        526 VINPELQTPATKFCLRQKNHQGHNRNVWAVDFFHVLPVLPSTmSHMIQFSINLGCgTHQPGNSVSLEFSTNhGRSWSLLH 605  human
XP_002120384  498 PIPRRARTPGTNICFSQEDHGGRDVNVWGVDSFTLVDKQIDN-HYFMQFSINLAC-GHAHTSSVEVQYSTDhGRTWLLLQ 575  Ciona intesti...
O93574        274 VISPDLQTPATKFCLKQKSHQGHNRNVWAVDYFHVLPVLPSTvTHMIQFSINLGCgTYQPGNSVSLEFSTNhGRSWSLLH 353  chicken
CAG08723      456 ALPTDLQTPVTKFCLEQRSHGGPDRHVWAMDFMQLLPVLPGThTHLAQFSINLGCgSYQPANSVSLEFSTNqGRSWSLLH 535  Tetraodon nig...
NP_001131084  529 VISPDLQTPATKFCLKQNNHRGHNLNVWAVDFVHVLPVLPSTeSHMVQFSINLGCgSHQPGNSVRLEFSTNhGRSWSLLH 608  western clawe...
XP_002597264  375 PVPTSAQKRSTRFCLRQLAHKGLNRNVWAVDEFQLLPRLPASvDHFAQFSVNIGCgSQHDAYSINVEYSSDhGRHWSLLQ 454  Florida lancelet
Feature 1                                                 ## #                        
P78509        606 TECLPEICAGpHLPHSTVYSSENYSGWNRITIPLPNaALTRNTRIRWRQTGPIl--GNMWAIDNVYIG 671  human
XP_002120384  576 NECLPGSCPGhFWWQNTVYDSDAYSSWRRVTIPLPEsALTTATRFRWLEQRSNv--TSQWAIDDVYVG 641  Ciona intestinalis
O93574        354 TECLPEICAGpHLPHSTVYASENYSGWNRITTPVPNaALTSDTRIRWRQTGPIh--GNMWAIDNIYIG 419  chicken
CAG08723      536 TECLPELCAGpHLPHSTIYSSDNYSGWTRISIPLPNaALTDATRFRWKQSGTVagsILHWSRLPSFLL 603  Tetraodon nigroviridis
NP_001131084  609 SECLPELCAGsHLPHSTIYSSDNYSGWNRITIPLPNaALTRDTRLRWRQNGPVm--GNMWALDNIYIG 674  western clawed frog
XP_002597264  455 TECLPGTCVGaHWPYSTVYSSDTHRGWSRITVPLPYaALTSSTRLRWIQPHSAs--HSRWALDNVYIG 520  Florida lancelet

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