6RM3,8ESQ,6UZ7,6D90,4ADX,5XY3,4V6W,7PZY,7R81,5XXB,7PWG,3J79,6ZJ3,2JOY


Conserved Protein Domain Family
eL14

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cd23702: eL14 
Vairimorpha necatrix ribosomal protein eL14 and similar proteins
eL14 is a component of the large subunit (LSU) of the microsporidian ribosome that reveals a prokaryotic-like rRNA core covered with eukaryotic ribosomal proteins.
Statistics
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PSSM-Id: 467915
Aligned: 136 rows
Threshold Bit Score: 48.2098
Created: 27-Apr-2023
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
RNA bindingoligomer
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:RNA binding site [nucleic acid binding site]
Evidence:
  • Structure:6RM3; Vairimorpha necatrix ribosomal protein eL14 interacts with rRNA, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                  #                    #                             
6RM3_LM0    2 KFIELGRLVAPIIKkerniKAIIIGIIDSTFVVLKKSn----GENEVCPVSS--LILLDEVYDIKnlsseeivkl----- 70  Vairimorpha necatrix
2JOY_A      2 PAIEVGRICVKVKGreagsKCVIVDIIDDNFVLVTGPkditgVKRRRVNILH--LEPTDKKIDIQkgasd---------- 69 
TBU00465   13 KFVEVGRLVTDKMVdnrdvFGVITDIQDSKIVIVQYPs----KQRKLCALRG--LYLLDTVIPIKkkmtikevntviese 86  Hamiltosporidium m...
Q8TX43      3 APIEVGRICVKTAGreagkYCVVVDIVDENFVIITGPkdvtgVKRRRCNIKH--LEPTPEKVDIDrga------------ 68 
A8ABY5      2 PAIEVGRVCVIIAGrragkKCVIVDLIDDKFVLVTGPkelngVKRRRMNIKH--LEPLDKKVEIEkgaddakv------- 72 
Q9YDD7      3 KVVEVGRICVKTRGreagrKCVIVDIIDENFVLVTGPksltgVRRRRVNIDH--IEILDKKVDIQkgasde--------- 71 
Q4JAJ9      2 PAIEIGRICVKTRGreagkKCVIVDIIDSNFVLVTGPkeingVKRRRVNILH--IEPTDKKVEINkgatd---------- 69 
A3DND4      2 PAIEIGRICVKVAGreagrKCVIVDIIDENFVLITGPksltgVKRRRANVKH--IEPLDKVIDISrgasd---------- 69 
A2BME7      2 PAIEVGRLCVKTRGreagrKCVIVEIIDDNFVLITGPkdvsgVKRRRANINH--IEVLPEKINIQpgasdee-------- 71 
Q975L7      2 PAIEIGRICVKTRGreagkKCVIVDIIDENFVLVTGPkd--vNKVKRRRVNIlhLEPTDKKIDINkgasd---------- 69 
Feature 1                                                
6RM3_LM0   71 -------------ienkkeeggASNDFERFKNKLREEVKKNIL 100 Vairimorpha necatrix
2JOY_A     70 -----------------eevkkKLEESNLTEYMKEKIKIRMPT 95 
TBU00465   87 nvvakyeesefykncleikrykNLSDFERYKVDLKKEVEEKLL 129 Hamiltosporidium magnivora
Q8TX43     69 --------------------sdEEVKEALEEAGLLDLMKEGIV 91 
A8ABY5     73 ---------------leairqaGLEEFMKEEVKPELPVPPSLG 100
Q9YDD7     72 ----------------evlkalEEAGLADFMREPVRIARITPF 98 
Q4JAJ9     70 ------------------qevkQAIEQSGLTDFIKEAVKPKIP 94 
A3DND4     70 -----------------eevlrAIANAGLTEFMKEIVKPKLVP 95 
A2BME7     72 ----------------vkkaleEAGLLDFMRERVRIELKPGLL 98 
Q975L7     70 -----------------devkkKLEEAGLIEFMKQDVKPKIPV 95 

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