Conserved Protein Domain Family
SPOC_PHF3

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cd21548: SPOC_PHF3 
SPOC (Spen paralog and ortholog C-terminal) domain found in PHD finger protein 3 (PHF3)
PHF3 is a human homolog of yeast protein bypass of Ess1 (Bye1), a nuclear protein with a domain resembling the central domain in the transcription elongation factor TFIIS. It is ubiquitously expressed in normal tissues including brain, but its expression is significantly reduced or lost in glioblastomas. PHF3 contains an N-terminal plant homeodomain (PHD) finger, a central RNA polymerase II (Pol II)-binding TFIIS-like domain (TLD) domain, and a C-terminal SPOC domain. This model corresponds to the SPOC domain which is involved in developmental signaling and has also been proposed to be a phosphorylation binding module.
Statistics
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PSSM-Id: 439211
Aligned: 6 rows
Threshold Bit Score: 299.09
Created: 3-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q92576       1208 IWKGFINMPsvaKFVTKAYPVSGspeyltedLPDSIQVGGRISPqtVWDYVEKIKASgtkEICVVRFTPvteedqisYTL 1287 human
Q4RQ97        870 LWRGFIHMHtvaKLVTKAFSVSGimdnlnedLPDSIQVGGRISPqiVWDYLEKIRATgtkEVCLIRFSPeteedeisYTL 949  spotted green...
KYO47100      460 IWKGFINMPsvaKFVIKAYPVSGsfeyltedLPDSIQVGGRISPhtVWEYVEKIKASgtkEICVVRFTPvteedqisYTL 539  American alli...
XP_006010805 1196 IWKGFINMPsvaKLVTKAYPVSGtleyltedLPDSIQVGGRISPqtVWDYVEKIKASgtkEICIVRFCPaseedqisYTL 1275 coelacanth
XP_018118995 1133 IWQGFLNMPsvaKFLIKAYPVSGslehlaedLPESIQVGGRISPqtVWDYVDKIKASgtkETCLVRFSPvteedqisYTL 1212 African clawe...
XP_007892267 1395 LWKGFVNMHsvaKFVTKAYPVSGsvehltedLPDTIQVGGRIPPqtVWDYVDKIKASgtkEICVIRFAPvteedqitYTS 1474 elephant shark
Q92576       1288 LFAYFSSRKRYGVAANnmkqVKDMYLIPLGATDKIPHPLvpfdgPGLELHRPNLLLGLIIR 1348 human
Q4RQ97        950 LYAYFSSRKRFGVVSNnrkqVKDMYLIPLGAIEKVPYQLvpfdgPGLENSRPNLLLGLIIR 1010 spotted green pufferfish
KYO47100      540 LFAYFSSRKRYGVAANnmkqVKDLYLIPLGASDKIPHHLvpfdgPGIELHRPNLLLGLIIR 600  American alligator
XP_006010805 1276 LYAYFSSRRRYGVVANnmrqVKDMYLIPLGTSEKVPHHLvpfdgPGLEACRSNLLLGLIIR 1336 coelacanth
XP_018118995 1213 LFSYFSSRKRYGVVANnmrqVKDMYLIPLGASEKIPHFFvpfdgPGLEAHRPNLLLALIIR 1273 African clawed frog
XP_007892267 1475 LYAYFSSRQRYGVVANnvkqVKDMYLIPLGLSEKIPYRLlpfdgPGLELARQNLLLGLIIR 1535 elephant shark
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