1YFO


Conserved Protein Domain Family
R-PTPc-A-1

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cd14621: R-PTPc-A-1 
Click on image for an interactive view with Cn3D
catalytic domain of receptor-type tyrosine-protein phosphatase A, repeat 1
Receptor-type tyrosine-protein phosphatase A (PTPRA), also known as receptor-type tyrosine-protein phosphatase alpha (R-PTP-alpha), belongs to the family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRA is a positive regulator of Src and Src family kinases via dephosphorylation of the Src-inhibitory tyrosine 527. Thus, it affects transformation and tumorigenesis, inhibition of proliferation, cell cycle arrest, integrin signaling, neuronal differentiation and outgrowth, and ion channel activity. It is also involved in interleukin-1 signaling in fibroblasts through its interaction with the focal adhesion targeting domain of focal adhesion kinase. PTPRA comprises a small extracellular domain, a transmembrane segment, and an intracellular region containing two tandem catalytic PTP domains. This model represents the first catalytic PTP domain (repeat 1).
Statistics
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PSSM-Id: 350469
Aligned: 7 rows
Threshold Bit Score: 625.51
Created: 14-Oct-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic siteactive site
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: catalytic site [active site], 2 residue positions
Conserved feature residue pattern:C RClick to see conserved feature residue pattern help
Evidence:
  • Comment:the catalytic cysteine initiates a nucleophilic attack on the phosphate group of the substrate, forming a transient phosphoenzyme intermediate and releasing the substrate dephosphorylated; the transition state is stabilized by the arginine present in the catalytic pocket

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
1YFO_A         4 TNRKYPPLPvDKLEEEINRRMAdDNKLFREEFNALPACPIQATCEAASKEEnkEKNRYVNILPYDHsRVHLTPVEGVPDS 83  house mouse
AAB04150     220 TNRKYPPLPvDKLEEEINRRIGdDNKLFREEFNALPACPIQATCEAASKEEnkEKNRYVNILPYDHsRVHLTPVEGVPDS 299 chicken
AAI63526     247 TNRKYPPLPvDKLEEEMNRRMAdDNKLFREEFNALPVCPIQASCDAASKEEnkEKNRYVNILPYDHsRVHLTSLEGVPDS 326 zebrafish
P18433       214 TNRKYPPLPvDKLEEEINRRMAdDNKLFREEFNALPACPIQATCEAASKEEnkEKNRYVNILPYDHsRVHLTPVEGVPDS 293 human
AAA17990     234 TNRKYPPLPvDKLEEEINRRMAdDNKLFREESNALPACPIQATCEAASKEEnmEKNRYVNILPYDHsRVHLSPIEGVPDS 313 African clawed ...
XP_014350052 212 TNRKYPPLPvDKLEEEINRRMAdDNKLFREEFNALPACPIQTTCDAASKEEnkEKNRYVNILPYDHsRVHLTPVEGVPDS 291 coelacanth
XP_007896212 198 TNRKYPPLSiEKLEEEANRRMAdDNKLFREEFNALPTCPIQASCEAASKEEnkEKNRYVNILPYDHsRVHLTPVEGVPDS 277 elephant shark
Feature 1                                                                                        
1YFO_A        84 DYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnVRVSVEDVT 163 house mouse
AAB04150     300 HYINTSFINSYQEKNKFIAAQGPKEETVNDFWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnIRVSVEDVT 379 chicken
AAI63526     327 DYINASYINGYQEKNKFIAAQGPKEETVNDYWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnIRVSVEDTM 406 zebrafish
P18433       294 DYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnIRVSVEDVT 373 human
AAA17990     314 DYINSSFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnIRVSVEDMT 393 African clawed ...
XP_014350052 292 DYINASYINGYQDKNKFIAAQGPKEETVNDFWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnIRVSVEDVT 371 coelacanth
XP_007896212 278 DFINASYINGYQDKNKFIAAQGPKEETVNDFWRMIWEQntATIVMVTNLKERKECKCAQYWPDqgCWTYGnIRVSVEDMM 357 elephant shark
Feature 1                                                                            #     #     
1YFO_A       164 VLVDYTVRKFCIQQVGDvtnrkPQRLITQFHFTSWPDFGVPftPIGMLKFLKKVKACnpqyagAIVVHCSAGVGRTGTFV 243 house mouse
AAB04150     380 VLVDYTVRKFCIQQVGDvtnkkPQRLVTQFHFTSWPDFGVPftPIGMLKFLKKVKTCnpqyagAIVVHCSAGVGRTGTFI 459 chicken
AAI63526     407 ILVDYTIRKFCIQQVGDvsgkkPQRLVTQFHFTSWPDFGVPftPIGMLKFLKKVKNCnpqyagPIVVHCSAGVGRTGTFI 486 zebrafish
P18433       374 VLVDYTVRKFCIQQVGDmtnrkPQRLITQFHFTSWPDFGVPftPIGMLKFLKKVKACnpqyagAIVVHCSAGVGRTGTFV 453 human
AAA17990     394 VLVDYTVRKFCIQQVGDvtnkkPQRLITQFHFTSWPDFGVPftPIGMLKFLKKVKNCnpqyagAIVVHCSAGVGRTGTFM 473 African clawed ...
XP_014350052 372 VLVDYTIRKFCIQQVGDvtnkkPQRLITQFHFTSWPDFGVPftPIGMLKFLKKVKLNnppyagAIVVHCSAGVGRTGTFI 451 coelacanth
XP_007896212 358 VLVDYTIRKFCIQQVGDvtnkkPQRLVTQFHFTSWPDFGVPftPIGMLKFLKKVKTCnpsfagAIVVHCSAGVGRTGTFI 437 elephant shark
Feature 1                                                                
1YFO_A       244 VIDAMLDMMhserKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTEL 299 house mouse
AAB04150     460 VIDAMLDMMhaerKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTEL 515 chicken
AAI63526     487 VIDAMLDMMgaerKVDVFGFVTRIRAQRCQMVQTDMQYVFIFQALLEHYLYGDTEL 542 zebrafish
P18433       454 VIDAMLDMMhterKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTEL 509 human
AAA17990     474 VIDAMLDMMntekKVDVYGFVTRIRAQRCQMVQTDMQYVFIYQALLEHFLYGDTEL 529 African clawed frog
XP_014350052 452 VIDAMLDMMqterKVDVYGFVTRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTEL 507 coelacanth
XP_007896212 438 VIDAMLDMMhaerKVDVFGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTEL 493 elephant shark

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