2CRG,2YQK


Conserved Protein Domain Family
SANT_MTA3_like

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cd11661: SANT_MTA3_like 
Click on image for an interactive view with Cn3D
Myb-Like Dna-Binding Domain of MTA3 and related proteins
Members in this SANT/myb family include domains found in mouse metastasis-associated protein 3 (MTA3) proteins and arginine-glutamic dipeptide (RERE) repeats proteins. SANT (SWI3, ADA2, N-CoR and TFIIIB) DNA-binding domains are a diverse set of proteins that share a common 3 alpha-helix bundle. MTA3 has been shown to interact with nucleosome remodeling and deacetylase (NuRD) proteins CHD4 and HDAC1, and the core cohesin complex protein RAD21 in the ovary, and regulate G2/M progression in proliferating granulosa cells. RERE belongs to the atrophin family and has been identified as a nuclear receptor corepressor; altered expression levels of RERE are associated with cancer in humans while mutations of Rere in mice cause failure in closing the anterior neural tube and fusion of the telencephalic and optic vesicles during embryogenesis.
Statistics
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PSSM-Id: 212559
Aligned: 32 rows
Threshold Bit Score: 78.4251
Created: 27-Feb-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative DNA
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:based on similarity to myb-like domains of yeast protein RAP1
  • Citation:PMID 8620531

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #                             ## ## ### ###  
2CRG_A         10 EWSASEACLFEEALEKYGKDFNDIRQDFLpwKSLTSIIEYYYMWKT 55   house mouse
2YQK_A         11 CWTEDEVKRFVKGLRQYGKNFFRIRKELLpnKETGELITFYYYWKK 56   human
AAL78679      126 KWTEDETKKFIKGLRQFGKNFFRIHKDLLphKDTPELVEFYYLWKK 171  fruit fly
AAF59243      417 SWSEDECLKFEEGIQRFGKDFYQIRQNQVrtRTMRELVHFYYLWKK 462  fruit fly
XP_784961     296 KWTDEETKLFIRGLRQFGKNFFRIRRDFLqhKDTRDLVEFYYYWKK 341  purple urchin
AAI29058      349 CWTEDEVKRFIKGLRQYGKNFFRIRKELLpnKETGELITFYYYWKK 394  African clawed frog
XP_002415339   46 KWTDEDQKRFVKGLRQYGKNFFKIRKELLshKETADLVEFYYLWKK 91   black-legged tick
XP_002122813  339 KWTEDQVKRFQKGLRQNGKNFYKIRKDLLpnMQTADLVEFYYLWKK 384  Ciona intestinalis
CAX73871      421 SWSESDCTAFEKSFALYGKDFRQIRETRLrhKTISEVIHFYYLWKK 466  Schistosoma japonicum
XP_002126210  291 TWSEEECRLFEHGLSLYGKDFHNIHHNKVrtKSIGEIVKFYYIWKK 336  Ciona intestinalis

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