1IGB,1CP6,1RTQ,1TXR,2ANP,2PRQ,3B3V


Conserved Protein Domain Family
M28_AAP

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cd03879: M28_AAP 
Click on image for an interactive view with Cn3D
M28 Zn-peptidase Aeromonas (Vibrio) proteolytica aminopeptidase
Peptidase family M28; Aeromonas (Vibrio) proteolytica aminopeptidase (AAP; leucine aminopeptidase from Vibrio proteolyticus; Bacterial leucyl aminopeptidase; E.C. 3.4.11.10) subfamily. AAP is a small (32kDa), heat stable leucine aminopeptidase and is active as a monomer. Similar forms of the enzyme have been isolated from Escherichia coli and Staphylococcus thermophilus. Leucine aminopeptidases, in general, play important roles in many biological processes such as protein catabolism, hormone degradation, regulation of migration and cell proliferation, as well as HIV infection and proliferation. AAP is a broad-specificity enzyme, utilizing two zinc(II) ions in its active site to remove N-terminal amino acids, with preference for large hydrophobic amino acids in the P1 position of the substrate, Leu being the most efficiently cleaved. It can accommodate all residues, except Pro, Asp and Glu in the P1' position.
Statistics
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PSSM-Id: 349875
Aligned: 32 rows
Threshold Bit Score: 395.458
Created: 3-Jun-2005
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
metal bindingactive site
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:H D [HE] E D HClick to see conserved feature residue pattern help
Evidence:
  • Structure:1IGB: Aeromonas proteolytica aminopeptidase bound to Zn(II) ions; contacts at 4.0A
  • Citation:PMID 8087555

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
1IGB_A      3 PITQQATVTAWLPQVDASQITGTISSLESFtNRFYTTTSGAQASDWIASEWQALSASlPNASVKQVSHSgYNQKSVVMTI 82  Vibrio proteolyticus
1RTQ_A      3 PITQQATVTAWLPQVDASQITGTISSLESFtNRFYTTTSGAQASDWIASEWQALSASlPNASVKQVSHSgYNQKSVVMTI 82  Vibrio proteolyticus
1TXR_A      3 PITQQATVTAWLPQVDASQITGTISSLESFtNRFYTTTSGAQASDWIASEWQALSASlPNASVKQVSHSgYNQKSVVMTI 82  Vibrio proteolyticus
2ANP_A      3 PITQQATVTAWLPQVDASQITGTISSLESFtNRFYTTTSGAQASDWIASEWQALSASlPNASVKQVSHSgYNQKSVVMTI 82  Vibrio proteolyticus
2PRQ_A      3 PITQQATVTAWLPQVDASQITGTISSLESFtNRFYTTTSGAQASDWIASEWQALSASlPNASVKQVSHSgYNQKSVVMTI 82  Vibrio proteolyticus
3B3V_A      3 PITQQATVTAWLPQVDASQITGTISSLESFtNRFYTTTSGAQASDWIASEWQALSASlPNASVKQVSHSgYNQKSVVMTI 82  Vibrio proteolyticus
BAA31158  106 PLTQGASVNRLLPYLDQGNIVGTISQLASWrNRYYTTTTGVQSADWVAGQWQSLSATlPWASVSRVKHSgYPQQSVVLTL 185 Aeromonas punctata
BAB79616  113 SIDNPTRVNSLISKVSTVNLDSSVNSLTSFyNRYYTSQTGIDAAAWVKQTWSDIAASrSDISVEYFSHS-WAQSSVIVTI 191 Alteromonas sp. O-7
AAQ57736  122 AIDNQAVVNKLLPQLQDSNVLGTIQSLSNYqNRFYTTSHGVNASNWIAAQWKQLAGSrADVTVEQFTHAnWPQKSVILTI 201 Chromobacterium vi...
AAT68712  108 TISHHETVETLINQVEPTNLVKTIEDMTSFtNRFYTTPTGIEASNWLLERWIKEIEGvSYASAVQIPHAgFPQKSVEVTL 187 Vibrio harveyi
Feature 1                   #                   #                                 ##          
1IGB_A     83 TGseAPDEWIVIGGHLDSTIGshtneqsvAPGADDDASGIAAVTEVIRVLSEnNFQPkRSIAFMAYAAEEVGLRGSQDLA 162 Vibrio proteolyticus
1RTQ_A     83 TGseAPDEWIVIGGHLDSTIGshtneqsvAPGADDDASGIAAVTEVIRVLSEnNFQPkRSIAFMAYAAEEVGLRGSQDLA 162 Vibrio proteolyticus
1TXR_A     83 TGseAPDEWIVIGGHLDSTIGshtneqsvAPGADDDASGIAAVTEVIRVLSEnNFQPkRSIAFMAYAAEEVGLRGSQDLA 162 Vibrio proteolyticus
2ANP_A     83 TGseAPDEWIVIGGHLDSTIGshtneqsvAPGADDDASGIAAVTEVIRVLSEnNFQPkRSIAFMAYAAHEVGLRGSQDLA 162 Vibrio proteolyticus
2PRQ_A     83 TGseAPDEWIVIGGHLDSTIGshtneqsvAPGADDDASGIAAVTEVIRVLSEnNFQPkRSIAFMAYAAEEVGLRGSQDLA 162 Vibrio proteolyticus
3B3V_A     83 TGseAPDEWIVIGGHLDSTIGshtneqsvAPGADDDASGIAAVTEVIRVLSEnNFQPkRSIAFMAYAAEEVGLRGSQDLA 162 Vibrio proteolyticus
BAA31158  186 KGsrYPDEVVVLGGHLDSTAGsapnsrtlAPGADDDASGIATLTEVLRVIAEqGRQPeRTLQFIGYAAEEVGLRGSKDIA 265 Aeromonas punctata
BAB79616  192 PGseLSDEIVIIGGHLDSINQsns--sglAPGADDNASGIAVLTEALSAIVEdGYKPqRTIQIMGFAAEEVGLRGSKAIA 269 Alteromonas sp. O-7
AAQ57736  202 KGsdNAAETVVLGGHLDSTVGsgtgessrAPGADDDASGVASLTEVIRVLMAgNYQPrRTIKFMAYSAEEVGLRGSADIA 281 Chromobacterium vi...
AAT68712  188 LGakYPEEIIVVGGHLDSTAGtwteehtiSPGADDDASGIATVTEALRLMIAsGVQPdRTIKFYGYAAEEVGLRGSQGVV 267 Vibrio harveyi
Feature 1                     #                                                               
1IGB_A    163 NQYKSEGKNVVSALQLDMTNYkgsAQDVVFITDYTDSNFTQYLTQLMDEYLPsLTYGFDTCGYACSDHASWHNAGYPAAM 242 Vibrio proteolyticus
1RTQ_A    163 NQYKSEGKNVVSALQLDMTNYkgsAQDVVFITDYTDSNFTQYLTQLMDEYLPsLTYGFDTCGYACSDHASWHNAGYPAAM 242 Vibrio proteolyticus
1TXR_A    163 NQYKSEGKNVVSALQLDMTNYkgsAQDVVFITDYTDSNFTQYLTQLMDEYLPsLTYGFDTCGYACSDHASWHNAGYPAAM 242 Vibrio proteolyticus
2ANP_A    163 NQYKSEGKNVVSALQLDMTNYkgsAQDVVFITDYTDSNFTQYLTQLMDEYLPsLTYGFDTCGYACSDHASWHNAGYPAAM 242 Vibrio proteolyticus
2PRQ_A    163 NQYKSEGKNVVSALQLDMTNYkgsAQDVVFITDYTDSNFTQYLTQLMDEYLPsLTYGFDTCGYACSDHASWHNAGYPAAM 242 Vibrio proteolyticus
3B3V_A    163 NQYKSEGKNVVSALQLDMTNYkgsAQDVVFITDYTDSNFTQYLTQLMDEYLPsLTYGFDTCGYACADHASWHNAGYPAAM 242 Vibrio proteolyticus
BAA31158  266 TRYKAANTKVLAALQLDMTNYqgsAEDIVFMTDYTDQGLTGYLAQLLDAYLPqIRYGYDSCGYGCSDHASWHNQGYPAAM 345 Aeromonas punctata
BAB79616  270 QSYSSQGKNVVGMTQFDMTGRnrsSADIVMMTDYTNSAQNQFLGQLIETYLPnLSYAYDQCGYGCSDHASWYQQGFPASM 349 Alteromonas sp. O-7
AAQ57736  282 KRFKQQQAKVVGALQLDMTNYqgdAQDIFLFTDYTNAAQNTFLANLAKVYLPsLKVGYSQCGYACSDHASWNAQGYAASF 361 Chromobacterium vi...
AAT68712  268 SMLSSRGANVLSALQLDMTNYngsAHDITFITDYTDSNLTAFLAELIDEYAPeITYGFDRCGYACSDHASWHNAGYPAAM 347 Vibrio harveyi
Feature 1                  #                               
1IGB_A    243 PFESKFNDYNPRIHTTQDTLAnsdpTGSHAKKFTQLGLAYAIEMG 287 Vibrio proteolyticus
1RTQ_A    243 PFESKFNDYNPRIHTTQDTLAnsdpTGSHAKKFTQLGLAYAIEMG 287 Vibrio proteolyticus
1TXR_A    243 PFESKFNDYNPRIHTTQDTLAnsdpTGSHAKKFTQLGLAYAIEMG 287 Vibrio proteolyticus
2ANP_A    243 PFESKFNDYNPRIHTTQDTLAnsdpTGSHAKKFTQLGLAYAIEMG 287 Vibrio proteolyticus
2PRQ_A    243 PFESKFNDYNPRIHTTQDTLAnsdpTGSHAKKFTQLGLAYAIEMG 287 Vibrio proteolyticus
3B3V_A    243 PFESKFNDYNPRIHTTQDTLAnsdpTGSHAKKFTQLGLAYAIEMG 287 Vibrio proteolyticus
BAA31158  346 PFESRFNDYNPKIHTAQDTLQnsdpSAAHALKFAQLATSFAIEMG 390 Aeromonas punctata
BAB79616  350 PFESRMSEINRKIHTTNDTEF----DSTHAQKFAKLALAFVAELG 390 Alteromonas sp. O-7
AAQ57736  362 PFESSFNNSNPYIHSRNDTLAssgnQAKHALKFSQLALAYAVELG 406 Chromobacterium violaceum ATCC 12472
AAT68712  348 PFESMFEDYNPNIHTQFDTLEnadpTATHASNFAKLAVAYLVESS 392 Vibrio harveyi

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