Conserved Protein Domain Family
PseudoU_synth_hDyskerin

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cd02572: PseudoU_synth_hDyskerin 
Pseudouridine synthase, human dyskerin like.
This group consists of eukaryotic and archeal pseudouridine synthases similar to human dyskerin, Saccharomyces cerevisiae Cbf5, and Drosophila melanogaster Mfl (minifly protein). Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactor is required. S. cerevisiae Cbf5 and human dyskerin are nucleolar proteins that, with the help of guide RNAs, make the hundreds of psueudouridnes present in rRNA and small nuclear RNAs (snRNAs). Cbf5/Dyskerin is the catalytic subunit of eukaryotic box H/ACA small nucleolar ribonucleoprotein (snoRNP) particles. D. melanogaster mfl hosts in its fourth intron, a box H/AC snoRNA gene. In addition dyskerin is likely to have a structural role in the telomerase complex. Mutations in human dyskerin cause X-linked dyskeratosis congenitas. Mutations in Drosophila Mfl results in miniflies that suffer abnormalities.
Statistics
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PSSM-Id: 211338
Aligned: 31 rows
Threshold Bit Score: 288.391
Created: 3-Mar-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
probable active
Feature 1:probable active site [active site]
Evidence:
  • Comment:D of active site is key conserved residue

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                       ####                                          
O60832     88 RTGFINLDKPSNPSSHEVVAWIRRILRVeKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHnaiegGT 167 human
O26140     35 SMGVVNLDKPSGPTSHQVDSWVRDMLHVeKVGHGGTLDPKVTGVLPLGIDRATRVMQLLLEAPKEYVCLMRVHre-vdEE 113 Methanothermobacte...
Q57612     44 KYGVVVVDKPRGPTSHEVSTWVKKILNLdKAGHGGTLDPKVTGVLPVALERATKTIPMWHIPPKEYVCLMHLHrd-asEE 122 Methanocaldococcus...
Q9HPA4     17 SFGVVNLDKPPGPSAHQVSAWIRDLVGVeKAAHAGTLDPKVTGCLPVLTGTATRIAPALLEGFKEYVAVLELHdd--pPR 94  Halobacterium sali...
O30001     32 RKGLVCIDKPMGPSSHEVVVWVRRILNVsKTGHAGTLDPRVTGVLPIFIENATKMVKFLQESSKEYVCLMRLHgd-akRE 110 Archaeoglobus fulg...
P60346     57 KYSVINLDKPSGPTSHQVVAWVRDIVGV-KAGHGGTLDPKVTGVLPIAIGEATKVLQTLLIAGKEYVALMHLHke-vsEK 134 Nanoarchaeum equitans
Q8TZ08     43 MKGVINLDKPAGPTSHEVVAWVKEIFGLsKAGHGGTLDPKVTGVLPIALEKATKIIQTLLPAGKEYVTIMHLHgd-vdEE 121 Methanopyrus kandleri
O59357     45 QYGVINLDKPPGPTSHEVVAWIKRILNLeKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHgd-vpEN 123 Pyrococcus horikoshii
Q8TRR5     41 EKGVVNIDKPSGPTSHEVAAWVKAILGVnTAGHAGSLDPKVTGLLPTLLGKATKAVPALRLSGKEYVCHLKLHra-mpPK 119 Methanosarcina ace...
Q5UXH1     35 SFGVVNLDKPPGPSAHQVAAWIRDATGQdRVAHGGTLDPKVTGCLPVLLGDAARMAQVFDNAVKEYVTVLELHdq--aPA 112 Haloarcula marismo...
Feature 1                                                                #                    
O60832    168 QLSRALETLTGALFQRPPLIAAVKRQLRVRTIYESKMIEYDperrLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELR 247 human
O26140    114 RIREVLGEFQGKIFQIPPLKSAVKRDLRVRTIYRVDILEVDg--qDVLFRIACEAGTYVRKYCHDVGEALGAGAHMAELR 191 Methanothermobacte...
Q57612    123 DILRVFKEFTGRIYQRPPLKAAVKRRLRIRKIHELELLDKDg--kDVLFRVKCQSGTYIRKLCEDIGEALGTSAHMQELR 200 Methanocaldococcus...
Q9HPA4     95 ILPDVIEAFTGEIYQKPPKKSAVARRLRTRTVYDLDVLDVDg--rQVLLRIRCESGTYIRKLCHDIGRALGTNAHMGHLR 172 Halobacterium sali...
O30001    111 DVEKVMKLFVGRIYQRPPLKSAVKKVLRIREIYEMELLEMEg--rDVLFRVVTESGTYIRKLCRDIGEVLGTGAHMQELR 188 Archaeoglobus fulg...
P60346    135 DIIKVMSKFVGTIIQTPPLRSAVKKRPRKKKVYCIKIIEIDg--kDVLFRVSTQGGVYIRKLIHDIGVKLGVGAHMQELR 212 Nanoarchaeum equitans
Q8TZ08    122 ELERVVKEFEGTILQRPPLRSAVKRRVRPKKIYYIDILEIDg--rDVLMRVGCQAGTYIRKLCHDIGEALGVGAHMAELR 199 Methanopyrus kandleri
O59357    124 KIIDVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEILEIDg--rDVLFKVGVEAGTYIRSLIHHIGLALGVGAHMAELR 201 Pyrococcus horikoshii
Q8TRR5    120 LVRKVCEEFTGPIYQMPPIKSAVKRVIRVRTIYYIEVLEIEg--mSVLFRVGCEAGTYIRKLCHDIGLALGCGGHMQALR 197 Methanosarcina ace...
Q5UXH1    113 DIADIVAEFETDIYQKPPRKSAVKRQLRSRRIHSLDILEQGd--rRLLLRVRCASGTYIRKLCHDIGLAAGTGAHMGDLR 190 Haloarcula marismo...
Feature 1                            
O60832    248 RVRSGVmseKDHMVTMHDVLDAQ 270 human
O26140    192 RTAVGPf-tEEGLVTLHDLKDAY 213 Methanothermobacter thermautotrophicus str. Delta H
Q57612    201 RTKSGCf-eEKDAVYLQDLLDAY 222 Methanocaldococcus jannaschii
Q9HPA4    173 RSATTPf-dDTDLVTLHDLADAV 194 Halobacterium salinarum
O30001    189 RTRTGKf-gEDMCYTLQDLLDAY 210 Archaeoglobus fulgidus
P60346    213 RIKSGPf-hENNSVYLQDIVDSL 234 Nanoarchaeum equitans
Q8TZ08    200 RTRTGPf-sEENAVTLHDVKDAY 221 Methanopyrus kandleri
O59357    202 RTRSGPfkeDETLVTLHDLVDYY 224 Pyrococcus horikoshii
Q8TRR5    198 RTKAGPf-tEKTLVTLHELKDAY 219 Methanosarcina acetivorans
Q5UXH1    191 RTATGTf-dDGSLSTMHDLVDAL 212 Haloarcula marismortui

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