1TRE,1B9B,1DKW,1HG3,1HG3,1HTI,1M6J,1MO0,1TPV,1TRE,1W0M,1YDV,1YYA,2I9E,7TIM


Conserved Protein Domain Family
TIM

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cd00311: TIM 
Click on image for an interactive view with Cn3D
Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Statistics
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PSSM-Id: 238190
Aligned: 229 rows
Threshold Bit Score: 111.474
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic triad [active site]
Evidence:
  • Structure:7TIM; Yeast TIM with bound reaction intermediate analog, phosphoglycolohydroxamate
  • Citation:PMID 2043623

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #                                                                        
1TRE_A      4 PLVMGNWKLngs--rhMVHELVSNLRkelagvagCAVAIAPPEMYIDMAKREAegshIMLGAQNVNLnlsgaftgetsAA 81  Escherichia coli
1W0M_A      4 PILIINFKAygeaagkRAVELAKAAEraar-elgVNIVVAPNHLELGLVSQSVd---IPVYAQGADVeaggahtahvsLE 79  Thermoproteus tenax
7TIM_A      4 FFVGGNFKLngs--kqSIKEIVERLNtasi-penVEVVICPPATYLDYSVSLVkkpqVTVGAQNAYLkasgaftgensVD 80  baker's yeast
CAC11458    2 YTAIVNLKTyreatgaNFTRFMEKFEpvq---gkFELIFSPSLLDLEKAAKCGk---FRFFAQHVDAepygaytghvpMD 75  Thermoplasma acido...
AAK42716    4 PIIIINFKAyensfgdKAVNLGKKIEkisk-eysVEIILSTPATMIYRMSQEVd---LPIYAEHVDPvplgaftgailPE 79  Sulfolobus solfata...
BAB60452   12 FTVIVNLKNya---eaNGKNFVEFVSklpk-ydsVRLIIAPAILDLHNAHEFRn---VEFFSQHVDDvgygpytghiaIE 84  Thermoplasma volca...
AAL63521    4 PILIINFKAyyeasgrRAVHIAKAAErvak-elgVNIAVAPNHLELALVAQSVe---IPVYAQGADVespgahtahvaVD 79  Pyrobaculum aeroph...
AAM02877    5 PPVIVNFKAyseavgeNALRLARVAAevse-etgVEVGICPPHVDLRDVVREVgd-eVTVLAQAVDAaepggrtghvtPE 82  Methanopyrus kandl...
Q9YBR1      3 PVLAVNMKTyssafgeGARRLARDAArvar-evdVRVILVAPLINASSLAGVY----GDVYIQHADPvdlgahtgytpVE 77  Aeropyrum pernix
AAT42933    3 PLIFINFKHyenatgrNAELLLNEFRkik---dqKNIYYCLGPGDLRLSLEFPd---LNIYSQHVDYngygpytgsisMN 76  Picrophilus torrid...
Feature 1                  #                                                                  
1TRE_A     82 MLKDIGAqYIIIGHSERRtyhkESDELIAKKFAVLKEQGLTPVLCIGEteaeneagkteevCARQIDAvlktqgaaafeg 161 Escherichia coli
1W0M_A     80 NIKEAGGsGVILNHSEAP----LKLNDLARLVAKAKSLGLDVVVCAPDpr----------tSLAAAALg----------p 135 Thermoproteus tenax
7TIM_A     81 QIKDVGAkWVILGHSERRsyfhEDDKFIADKTKFALGQGVGVILCIGEtleekkagktldvVERQLNAvleev--kdwtn 158 baker's yeast
CAC11458   76 MMIDLGItGSILNHSERR----LPRDTIINTLKKASKLDFTIVLCVENae----------eAKYFREYe----------p 131 Thermoplasma acido...
AAK42716   80 MVKDAGAkGTLINHSERR----LRADEIDDVLKRTKKLGLKSILCVDRye----------lVYPFSLLk----------p 135 Sulfolobus solfata...
BAB60452   85 SLMNYGIiGSLLNHSERR----LGEDKIISTVKKAQMLGFEIALCVESme----------eAKRYSALk----------p 140 Thermoplasma volca...
AAL63521   80 NIKEAGAsGLILNHSEAP----LRLNEIAKLTARAKAAGLDVVICAPDpr----------tSLAAAALs----------p 135 Pyrobaculum aeroph...
AAM02877   83 MVVEAGAdGTLLNHSERR----MLLEDLKDVCRACINEGLLTIVCASDal----------aARAAGALs----------p 138 Methanopyrus kandl...
Q9YBR1     78 AAAAEGLrGVMVNHSEHK----VTYRHLQAVVSKARSLGLEVLACADTpe----------eAAAAALLr----------p 133 Aeropyrum pernix
AAT42933   77 FLKSINVnGSLLNHSEKR----LEIDDIRKTIEYSKSHDFKLVVCAENid----------eIKSISKLr----------p 132 Picrophilus torrid...
Feature 1          #                                                                          
1TRE_A    162 AVIAYEPVWAIGTGKSATpaqaqAVHKFIRDHIakvdan-iaeqvIIQYGGSVNa-sNAAELFAQpdIDGALVGGaslk- 238 Escherichia coli
1W0M_A    136 HAVAVEPPELIGTGRAVSry-kpEAIVETVGLVsrhf-----pevSVITGAGIEsgdDVAAALRLg-TRGVLLASaavka 208 Thermoproteus tenax
7TIM_A    159 VVVAYEPVWAIGTGLAATpedaqDIHASIRKFLasklgdkaaselRILYGGSANg-sNAVTFKDKadVDGFLVGGasl-- 235 baker's yeast
CAC11458  132 DFIAYEPRDLIGGDVSVSta-kpEIIEDIVKIYegt-------gtSVLVGAGIKtgeDVRRSIGLg-ARGILVASgvvks 202 Thermoplasma acido...
AAK42716  136 DAILIEPPELIGTGVSVSka-kpEVITRAVDEIrks------egiYLIAGAGITtgeDVYKALKLg-AHGIGVASavmka 207 Sulfolobus solfata...
BAB60452  141 SFIAYEPKELIGGNVSVSta-kpEIISEIVDICgte-------gvPVLVGAGIKnrqDVRKSLDLg-AQGILVSSgvvks 211 Thermoplasma volca...
AAL63521  136 HAVAVEPPELIGTGRAVSky-kpETVVETVQLVgrhf-----pdvAVITGAGIEsgeDVEAALKLg-TRGVLLASaavka 208 Pyrobaculum aeroph...
AAM02877  139 HAVAVEPPELIGTGTPVSka-dpEVVERSVEVVkevs-----eetAVLCGAGITdgsDVRAAVELg-ADGVLVASgvvla 211 Methanopyrus kandl...
Q9YBR1    134 SMVALEPPELIGTGIPVSqa-kpEVITRGVEAVarva-----pgvAVLAGAGITageDARRAVELg-AQGVLVASavmka 206 Aeropyrum pernix
AAT42933  133 DYIAYEPRELIGGDISVSna-kpDIIRSASLICsgn-------dvKLLVGAGIKtenDIKASINLg-ASGVLIASgvikd 203 Picrophilus torrid...
Feature 1                 
1TRE_A    239 ---adaFAVIVK 247 Escherichia coli
1W0M_A    209 kdpyakIVELAK 220 Thermoproteus tenax
7TIM_A    236 ---kpeFVDIIN 244 baker's yeast
CAC11458  203 adptksLNSLIE 214 Thermoplasma acidophilum
AAK42716  208 kepekvVEDFIT 219 Sulfolobus solfataricus P2
BAB60452  212 pdpvrsLNSLIK 223 Thermoplasma volcanium GSS1
AAL63521  209 kdpylkILELAK 220 Pyrobaculum aerophilum str. IM2
AAM02877  212 ddpkeaLLDLIS 223 Methanopyrus kandleri AV19
Q9YBR1    207 kdphgkMLELAE 218 Aeropyrum pernix
AAT42933  204 pkpinkLISLTG 215 Picrophilus torridus DSM 9790

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