Conserved Protein Domain Family
seadorna_VP8

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TIGR04233: seadorna_VP8 
seadornavirus VP8 protein
This protein family occurs in the seadornavirus virus group, with designations VP8 in Banna virus, and VP9 in Kadipiro virus and Liao ning virus. The function has not been assigned.
Statistics
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PSSM-Id: 211956
Aligned: 3 rows
Threshold Bit Score: 428.195
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_694465   8 HLLEGGLVDTLGNDSSLRKFARTTKYLANDWHDGAVSVLRNrNNESKLENSYQSFAGERLTHApGGNRGGLRTDLLVRCI 87  Kadipiro virus
AAQ83569    8 WLINPVALNGGMDTSAARRFARTTRTAAQGLRRGVEEALRS-GNESEFNNAYLIFSGQLPSNV-NPNDGGERSDVLRRLI 85  Liao ning virus
ACA50117    9 FLDNPHPVGVNYVDEGSRQFVAVAELLASKLIDSSRESDES-NSDIPFVQAYSKFADDNPRHL-RVKTGGKMANALTNVI 86  Banna virus
NP_694465  88 QSTVTQNVGINVPQAEKIALGNSLASSDTPASADHIMTTvPVI-LQKPNNVSHSVTGRKEMVATFSNENGEAININMSFR 166 Kadipiro virus
AAQ83569   86 TASSAVVNPATVAQNELIRLGQRLNSSDSAARADYVVYT-PIMrVDAPAGLTVVMSGHKSIRIDTNNPGQANLNLSMSYW 164 Liao ning virus
ACA50117   87 RSYYSINAPAIVPQIEIDRLASKATVSGDMYNSYAIFNSvPIIeVLSPAQTTVSIVGSERADVTMLNTGAGAANITFNFG 166 Banna virus
NP_694465 167 S-PTSIEIMSDTPFIYGRLGDAAQQAVQRLFLHSSNAGTYYFNIPANATRTFVITASTPRSMDKDTSLNYHivEAGFKRA 245 Kadipiro virus
AAQ83569  165 R-GSSLFVSCQSPFVHSRAGGANQNAVYSVMLNSNDAGAYNFIIPAGTRMVFEVSGTSTVSIDSGSDFTKA--ERGYQRA 241 Liao ning virus
ACA50117  167 QiAETVILKGSVPFQLARQNQPMPAARFTYKLRPLD-GPFIVVLPVGN--PLVISATAATRIQVPLAFNKAlvESGFQTA 243 Banna virus
NP_694465 246 KATGLLD---GVVARDFDEFVTNQCFNLPAAE--STCATLAILFEAYELVNLAADVKI 298 Kadipiro virus
AAQ83569  242 KADGLIVn--TILYPSLDMWMATMRYVFPNTD--STIALMIMLLETYEDVNVALSLRM 295 Liao ning virus
ACA50117  244 MNDGLFDtqnVNYYSSFDEFIIAQYHALDGINrvSTCVILGLALQAYDQMRRALPVRR 301 Banna virus
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