Conserved Protein Domain Family
malate_syn_A

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TIGR01344: malate_syn_A 
malate synthase A
This model represents plant malate synthase and one of two bacterial forms, designated malate synthase A. The distantly related malate synthase G is described by a separate model. This enzyme and isocitrate lyase are the two characteristic enzymes of the glyoxylate shunt. The shunt enables the cell to use acetyl-CoA to generate increased levels of TCA cycle intermediates for biosynthetic pathways such as gluconeogenesis. [Energy metabolism, TCA cycle]
Statistics
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PSSM-Id: 188132
Aligned: 5 rows
Threshold Bit Score: 887.616
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9ZH77        23 VLTEAALVFLAELHRRFTPRRDELLARRARRRAEISRT-GTLDFLPETAHVRADDsWRVAPAPPALQDRRVEITGPADRR 101 Streptomyces cl...
P95329        30 VLTPEALEFVAKLARNFGERRLALLERRKTVQAAWSKG-ARPHFLPETKAVREGD-WTVAPLPADLQDRRVEITGPVDRK 107 Myxococcus xant...
P21826        31 ILTKDALEFIVLLHRTFNSTRKQLLANRSNLQSKLDSGeYRFDFLPETEQIRNDPtWQGAIPAPGLINRSSEITGPPLRN 110 Saccharomyces c...
WP_010919633  22 VLTPEALAFVADLHRRFDARRRQLLEARQARQARFDAG-ELPDFLDETASIRSAD-WTIAAIPSDLLDRRVEITGPVNRK 99  Caulobacter vib...
WP_001880541  46 IFPVEAQTFLQQLCERFAPRVDELLTLREQKQTLIDQG-QLPDFLPETKDIREGS-WKILGIPDDLQDRRVEITGPTDRK 123 Vibrio cholerae
Q9ZH77       102 MTVNALNSGARVWLADFEDSSAPTWENVISGQLALSDAYHRRIDFTDeRSGKSYALRp-dAELATVVMRPRGWHLPERHL 180 Streptomyces cl...
P95329       108 MVINALNSGANVFMADFEDANSPTWDNVVRGQINLRDAVRGTISFTA-ENGKHYALN---PKRAVLFVRPRGWHLPERHI 183 Myxococcus xant...
P21826       111 MLVNALNAEVTTYMTDFEDSSSPTWENMIYGQVNLYDAIRNQIDFK--TPRKEYRLKddiSRLPTLIVRPRGWHMVEKHL 188 Saccharomyces c...
WP_010919633 100 MIINALNCGAKVFMADFEDATAPTWANVVEGQINLKDRWQGELTHVDaKSGKAYAMG---PTSAVLKIRPRGWHLMERHL 176 Caulobacter vib...
WP_001880541 124 MVINALNANVKVFMADFEDSMSPAWDKVLDGQINLRDAILGSISYTNpDNGKRYELN---ANPAVLICRVRGLHLKEKHV 200 Vibrio cholerae
Q9ZH77       181 TgPDGGVLPGALVDFGLCFFHTARRLLDLGKGPYFYLPKLESHQEARLWNDIFLFAQEQLGIPRGTIRATVLIETITAAY 260 Streptomyces cl...
P95329       184 E-IDGKPISGSLLDFGLFFFHNAREQLARGTGPYFYLPKMQSHLEARLWNDVFHLAQAELGIPRGTIKATVLIETLPAAF 262 Myxococcus xant...
P21826       189 Y-IDDEPISASIFDFGLYFYHNAKELVKIGKGPYFYLPKMEHHMEVKLWNDIFCVAQDFIGMPRGTIRATVLIETLPAAF 267 Saccharomyces c...
WP_010919633 177 E-VDGQAVAGALFDFGLYAFHNAKAAIAKGSGPYFYLPKLESHLEARLWNDVFIRAQEVLDLPVGTIKATVLIETIPAAF 255 Caulobacter vib...
WP_001880541 201 T-YNGLAIPGSLFDFALYFYNNHRALLKKGSGPYFYLPKLQAYQEAQWWSDVFHFTEDYFGLDTGTIKATVLIETLPAVF 279 Vibrio cholerae
Q9ZH77       261 EMEEILYELREHASGLNAGRWDYLFSIIKNFRDAgPGFVLPDRNAITMTAPFMRAYTELLVRTCHRRGAHAIGGMAAFIP 340 Streptomyces cl...
P95329       263 EMDEILYELREHSAGLNCGRWDYIFSFIKTLQSD-TRVVLPDRGQVTMDKAFLNAYSQLLIQTCHRRNVHAMGGMAAFIP 341 Myxococcus xant...
P21826       268 QMEEIIYQIREHSSGLNCGRWDYIFSTIKKLRNL-PEHVLPNRDLVTMTSPFMDAYVKRLINTCHRRGVHAMGGMAAQIP 346 Saccharomyces c...
WP_010919633 256 EMDEILFELKDHIVGLNCGRWDYIFSFIKRLGRR-EAFLTPDRSAMVMGKAFLGAYSLKLIQTCHRRGAFAMGGMAAQIP 334 Caulobacter vib...
WP_001880541 280 QMDEILFSLKEHIVGLNCGRWDYIFSYIKTLKKH-PDRVLPDRQVVTMDKPFLNAYSRLLIYTCHKRGAFAMGGMAAFIP 358 Vibrio cholerae
Q9ZH77       341 SRRDPEINRAAFEKVRADKDREAADGFDGSWVAHPDLVPVALASFDAVLGDrPHQKDRLR-EEVSVTAAELIAVgsPAAR 419 Streptomyces cl...
P95329       342 IKGDAAANDAVMDKVRADKLREVKNGHDGTWVAHPGLVEIARDIFDSHMKG-PNQLSNKR-EDVKIGEAELLKV--PSGT 417 Myxococcus xant...
P21826       347 IKDDPKANEAAMNKVRNDKIREMKNGHDGSWVAHPALAPICNEVFSN-MGT-ANQIYFVPdVHVT--SSDLLNTkiQDAQ 422 Saccharomyces c...
WP_010919633 335 VKGDEAANNAAFAKVRADKEREAGAGHDGTWVAHPDLVPVAMEVFNRLMPT-PNQLDR-KlDDLSITQAQMLEL--HEGS 410 Caulobacter vib...
WP_001880541 359 AK-DPALNEQVLQKIRGDKMLEATNGHDGTWVAHPGLADTAMAVFNEVLGErKNQLNVSRmADAPITAAELLAP--CDGS 435 Vibrio cholerae
Q9ZH77       420 PTAAGLLNAVRVGIRYIEAWLRGTGAVAIFHLMEDAATAEISRSQIWQWINAGVVLEN-GERVTPALVRTLAAGELGALR 498 Streptomyces cl...
P95329       418 RTEEGLRHNIRVGIQYTAAWLGGLGCVPLYNLMEDAATAEISRAQVWQWIHHGASLED-GRKVTLTLFRDALGEEMGRLE 496 Myxococcus xant...
P21826       423 VTTEGIRVNLDIGLQYMEAWLRGSGCVPINHLMEDAATAEVSRCQLYQWVKHGVVLSDtGDKVTPELTAKILNEETAKLA 502 Saccharomyces c...
WP_010919633 411 RTEAGVRENIRVGVRYTQAWIEGRGAVPLYNLMEDAATAEICRTQLWQWVRLGAALDD-GRVLSSELFVSLFSQEMSDLR 489 Caulobacter vib...
WP_001880541 436 RSEHGMRHNIRVALQYIEAWISGNGCVPIYGLMEDAATAEISRASIWQWIQHGKTLDN-GQVVTNELFRDYLKQEIEVVK 514 Vibrio cholerae
Q9ZH77       499 ETLGGEEYAAGRWQEAHDLLLRVALDEEYADFLTLPAYERLT 540 Streptomyces clavuligerus ATCC 27064
P95329       497 KEGAKERYGAAHLERARVLFEQLSTAGTFEDFLTLPAYDALE 538 Myxococcus xanthus DK 1622
P21826       503 SASPLGE--KNKFALAAKYFLPEVTGKIFSDFLTTLLYDEII 542 Saccharomyces cerevisiae S288c
WP_010919633 490 RE-----FASPRLEEAAHIFTRMVLSDDLEEFLTIPAYELL- 525 Caulobacter vibrioides
WP_001880541 515 SEVGESRFAQGRFTEAAELMERLTTSQELPNFLTIPGYDYLP 556 Vibrio cholerae
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