Conserved Protein Domain Family
OMP_b-brl

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pfam13505: OMP_b-brl 
Outer membrane protein beta-barrel domain
This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.
Statistics
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PSSM-Id: 463903
Aligned: 55 rows
Threshold Bit Score: 57.4087
Created: 25-Mar-2022
Updated: 13-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015782163   10 VaFATITAVNAQ-EFK---VGAK--AGLL--LSd-LSI--ANT---SIQw-sDG-GTSYlttgdinttlkaGFHF-GGFI 72  Capnocytophaga...
WP_012565962    9 T-ALVLLVATVP-ALAqgtRSGD--SGPY--IR--GSL--GYS---WSS---ED-EIDY------------SPLW-GIGA 58  Rhodospirillum...
WP_012528983   10 GaLLLATTLTAN-AGA---EELR--GRLA--LT--GKI--GVI---NPAksel-dtpqGtmv------vstDAGL-TGGL 66  Citrifermentan...
WP_012645430   12 AgTLLLSVGTV--SAA---GVEP--GAFY--LS--PIV--GGY---TFDg--KQ-HLET------------QPVG-GIRA 59  Geobacter dalt...
jgi:Sama_2812   5 LsLLFAASLSVS-PWV---AAE-----VY--VTpfAGYsfAAS---SLDa-nRD-GLDTngsv----saeeSSHY-GIIL 63 
tigr:ACP_1393  16 FgVA--VAVGQQ-NTAd-pAVNA--PRYD--LA--LGY--NYI---GANappGNcHCFA------------MHGG-FFSA 67 
Q01YP2          7 LsTVLLSAAGLT-PTY---AGDF--SKFNfnIG--GGV---MT---PINp-tAN-YVGL------------SGNF-AVGA 57  Candidatus Sol...
Q5DZQ2          7 ApLALALFVSSP-AFS---AEEEpaTRND--VT--VMV--GRV---GFSs-hDD-ASAN------------GNGF-AIGV 58  Aliivibrio fis...
vbi:Arad_1039  12 VaALALSAFVFA-ANS---ASAE--MQFS--AY--GGI--QGAtgsNVKtsdGA-NFDPdwsgks-fkmppYFGFrGIFW 77 
WP_011965622   14 MlLLLLFICNIGlVLA---QGRR--FGFE--LG--ANY---PI---GLQk-nGY-KEN-------------HVGF-YLNG 62  Bacteroidaceae
WP_015782163   73 EYGF--ND-RLFVEGGIDYa-fQGA----KVKSGEtmtvnlstydvsnekeNPNGTSIRTQQ-----LNIP---LWVK-- 134 Capnocytophaga...
WP_012565962   59 GYRI--NP-NLRVDLTADW---RDR----YIVEGGrgfa---------aggLPINSEVDNRT-----LMVN---AYYD-- 109 Rhodospirillum...
WP_012528983   67 GLMFgvDE-NVAVELEVSR---AS-----FHTSN--------------------FGTAQITD-----VSVG---AQYR-- 107 Citrifermentan...
WP_012645430   60 GYNF--TK-HLGAEALFDY---TRT----EGTRS--------------------STKTDFYR-----YGAD---ALLH-- 99  Geobacter dalt...
jgi:Sama_2812  64 GTTT--NH-PGNMYVLYSS---QST----DLIAGG----------------NFSN--ERVTS-----LKLDyahVGGSly 110
tigr:ACP_1393  68 GIHF--ND-WLSIEGKVTG---GHS----NDISA--------------------LGQ-NLTL-----TTFT---VGPR-- 106
Q01YP2         58 GYNI--NK-GNSIIGEFQW---NGL----PPNQVLql-------------pGLPFGNINLYS-----ITTN---YRRQ-- 104 Candidatus Sol...
Q5DZQ2         59 HKEI--NK-IVGISARYAR---HEL----LATGV--------------------TGEIGTFG-----AYPE---FGYR-- 98  Aliivibrio fis...
vbi:Arad_1039  78 LDDF--NKsNWGISLDYTHakvYGN----LGNTP--------------------GWSHFEFTdglnmLTLN---ALYR-- 126
WP_011965622   63 IYRFp-TN-PLSVNLKLGY---ESYtivlN--NTS-----------------NSLFNGRSLS-----LMPT---ANYH-- 108 Bacteroidaceae
WP_015782163  135 Y-DI-----AG-F--RPKV--GVNLGfl-tK--AELK-GKNEdgns------------------------etlsLNPNKT 175 Capnocytophaga...
WP_012565962  110 F-GAfdlmgNR-QqvRPYL--GAGIG----LstTKVD-DVDViiadqn--------------------rlerffGSDDDQ 160 Rhodospirillum...
WP_012528983  108 F-PE-----RQ-Rl-VPYL--GAGMD----VlvNDLS-NR-----------------------------------YTNTT 137 Citrifermentan...
WP_012645430  100 I-FP-----DN-Rl-VPYI--AAGYS----GmsL--D-SND---------------------------------GTKLTR 129 Geobacter dalt...
jgi:Sama_2812 111 F-PR-----GDf---LPYV--TASMG----Lt--QMR-PGDD--------------------------------YSDETR 140
tigr:ACP_1393 107 F-TW-----HH-GrfAPYGeaLFGAA----Wg--TGS-YFPRang---------------------------tsTTSASS 145
Q01YP2        105 VeRI-----GH-SpfGVYV--IAGGG----WyyRHIS-IDKNyvvppstvcspayiwwgygcdtgsfivsetiaSKGNSA 171 Candidatus Sol...
Q5DZQ2         99 F-DL-----NNaVsvKPYV--MVGIE----NniLGYT-DYWQ--------------------------------RHDFSV 133 Aliivibrio fis...
vbi:Arad_1039 127 F-QD-----PG-RkwTPYV--GLGAGinvpHveVTRAsGRTF--------------------------------DYQFGG 165
WP_011965622  109 F-LR-----NE-Sv-DSYV--GLGTG----VsiDNID-V-GV--------------------------------FNEGYK 140 Bacteroidaceae
WP_015782163  176 FDFGLGVGAEYNLPF---GLFF---DATFNLglTDVSTkekt---------teqfPALE---MRNRVIQIGVGYKF 233 Capnocytophaga och...
WP_012565962  161 FSWQLMAGAQVETGN---GLFF---DLGYRY--VDLGKvqlts--------ttgaLDED---LSAHELVATLGYRF 217 Rhodospirillum cen...
WP_012528983  138 VGAHLSAGVDCILNR---QASL---MLEAKG--IESFSanvd---------tpsgQHGE---FDPTNLSVTVGARF 193 Citrifermentans be...
WP_012645430  130 GVFDYGPGIKYFISD---TWAL---RGDFRH--LIFKH-----------------EGDS---YSNYEYNLGLVYSF 177 Geobacter daltonii
jgi:Sama_2812 141 FSLGLGVGAEYRLGE---RLAL---VADIRA--FATFIdsenslfcdannclwqvNADL---MWQGQANVGVSFRF 205
tigr:ACP_1393 146 VAYSVGGGLEYELTP---RMAVllpDAEFLH--TAL---------------------PNginGEQNTLEIGAGVVF 195
Q01YP2        172 GGVNAGTGFTIRLSDsgwKFYV---ESRYNY--AFS---------------------NR---VATTFVPVTFGFRF 218 Candidatus Solibac...
Q5DZQ2        134 ISFAKGLGIRAEFND---KVTL---SIDIKR--ADIE------------------IADDy-yVDSTISSLMLGVKF 182 Aliivibrio fischer...
vbi:Arad_1039 166 ASLQAQAGVSYQISQ---HWAT---FVEYKGn-YNFVDnvsid--------sgdtLKTK---VFTNAINFGVSFNF 223
WP_011965622  141 LHFAVAPQVGIRFIN---HINV---YLQY-----YV---------------------TH---KDFSRLVLGVGYVF 181 Bacteroidaceae
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