Conserved Protein Domain Family
Glucodextran_B

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pfam09136: Glucodextran_B 
Glucodextranase, domain B
Members of this family adopt a structure consisting of seven/eight-strand antiparallel beta-sheets, in a Greek-key topology, similar to the immunoglobulin beta-sandwich fold. They act as cell wall anchors, where they interact with the S-layer present in the cell wall of Gram-positive bacteria by hydrophobic interactions. In glucodextranase, Domain B is buried in the S-layer, and a flexible linker located between domain B and the catalytic unit confers motion to the catalytic unit, which is capable of efficient hydrolysis of the substrates located close to the cell surface.
Statistics
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PSSM-Id: 430428
Aligned: 8 rows
Threshold Bit Score: 82.9202
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KLU68048                184 PTLSVTA-PVDNLITNQAACTVTGTTNDATSSPCTVTvklnagaAEAVTVnADGTFSKALTLVAGSNTITVVSTDTAGKS 262 
PRJNA212797:N288_08155 1254 PELTITS-PADGLKTNKETVTVEGTVADANLDWVKVN-------GKKASV-QDGAYSLRILLNEGENIITVTAQDKAKNK 1324
WP_066108058           1280 PELTITS-PTDGSKTNKETVTVTGTIADANLDWVKVN-------GQTATV-SDGKFSKRILLDEGINEITVQAKDKAGNS 1350 Bac...
SDQ29420               1260 PELTIDS-PEDGDKTNRETVTVEGTVSDANLDFVDVN-------GREATVaDDGTYSKRILLDNGENQIEVIAQDLAGNV 1331
CEG24211               1273 PDLAITN-PVNGEKTNRETVTVEGTIADEHLESVTVN-------GQAASI-GDGTFSKRILLDNGKNVIEVKAVDAAGNE 1343
WP_047911705           1526 PELVVTS-PEDGETTNAEAYTVRGTVNDEYLDTVTVN-------GEAAEVtEDGSFEHRLLINSGDNVVTVIATDLAGNE 1597 Pae...
WP_066059310            366 PLLTIDS-PASLVTLGSSPVTVTGQV-DPDAVSLTVN-------GIEIPV-TGGSYSASVPLVEGYNAISSRMVLSDGAT 435  Hal...
CDE58250                 12 PALRIVEsPRD--TVTRATAEIVG-VTDPGA-FVTVN-------GIAVKVyKTGTFATTVDLSLGANDICVEAVTSDGAT 80  
KLU68048                263 STVTRTVTLDQ 273 
PRJNA212797:N288_08155 1325 INKKVTVFAKY 1335
WP_066108058           1351 IKKIITIDANY 1361 Bacillus sp. FJAT-27986
SDQ29420               1332 QTETITIDVDF 1342
CEG24211               1344 VSETVTITAQF 1354
WP_047911705           1598 TTITRTVVVNW 1608 Paenibacillus sp. TCA20
WP_066059310            436 KTASISVSLDL 446  Halioglobus sp. HI00S01
CDE58250                 81 VTRTQQCFRAE 91  
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